Click here to switch to the map view.

The map label for this gene is pcaH [H]

Identifier: 84622105

GI number: 84622105

Start: 488057

End: 488785

Strand: Direct

Name: pcaH [H]

Synonym: XOO_0448

Alternate gene names: 84622105

Gene position: 488057-488785 (Clockwise)

Preceding gene: 84622104

Following gene: 84622106

Centisome position: 9.88

GC content: 65.84

Gene sequence:

>729_bases
ATGCGTGATCCCACCTCTGACGAAGCTGCCATCGCTGCCGATCCGCTGCTCGGTTACCGCCGCAGCCGGCCCGGTGCGCA
GCCGCCGTACCTGCATCCGGCATACGCCTCCACCAGGCTGCGTGGGCCCACGCGTGATCCGATCGACCTGCCGGTCACGC
TGTTGGAAGTCACCGGCCCGCGCCTGGATCGGCTCACCTTGGGCGAGCACGCGGCCGATCTCACTGCAGGTTCCAGCGGC
GCGCCGCTGGGCGAACGCATCATCGTCTCTGGCCGCGTGCTCGACGAAAACGGCAGGCCGGTCCGCAATAGCGTGGTGGA
AGTGTGGCAATGCAACGCGGCTGGACGCTACCAGCACGCAGGCGATCAGCACGACGCGCCGCTGGACCCGAACTTCCGCG
GCACCGGCCAGGTGCTCACCGACGAGCACGGCCGCTACAGGTTCAAGACCATCAAGCCGGGTGCGTATCCGTGGCGCAAC
GCCTGGCGGCCGGCGCACATCCATTTTTCGTTGCATGGCGATGGCATCGGGCAACGGCTGGTCACCCAGATGTATTTTCC
CGGCGACCCGCTGCTGGCGCACGACCCCATCTTCAACTGTGTCGACGATGCGCTGGCGCGCGAACGCATGGTGTCCCGTT
TCGATTGGGAAAATGCGGTCAGCGAATACGCATTGGCCTACCGCTTCGACATCGTCTTGCGCGGTCGCAAGCAAACGGTC
TGGCAGTGA

Upstream 100 bases:

>100_bases
GCTGGCGATCGAACGCCTGTGAGCCGACTGTTGCAACCTACCTCGTCCTTCCCTTGCACCCATGCCGTTCTAGTCGCTTT
GCTGCCGACGGAGATTCAAG

Downstream 100 bases:

>100_bases
CACGATGAGCCTGCATGCAACGCCGTCGCAAACCGTCGGCCCGTATTACCGGCTTGGATTGGAGCCGCTGTATCGCCAAC
AGATCGCGCCCGCGCAGGCC

Product: protocatechuate 3,4-dioxygenase beta chain

Products: NA

Alternate protein names: 3,4-PCD [H]

Number of amino acids: Translated: 242; Mature: 242

Protein sequence:

>242_residues
MRDPTSDEAAIAADPLLGYRRSRPGAQPPYLHPAYASTRLRGPTRDPIDLPVTLLEVTGPRLDRLTLGEHAADLTAGSSG
APLGERIIVSGRVLDENGRPVRNSVVEVWQCNAAGRYQHAGDQHDAPLDPNFRGTGQVLTDEHGRYRFKTIKPGAYPWRN
AWRPAHIHFSLHGDGIGQRLVTQMYFPGDPLLAHDPIFNCVDDALARERMVSRFDWENAVSEYALAYRFDIVLRGRKQTV
WQ

Sequences:

>Translated_242_residues
MRDPTSDEAAIAADPLLGYRRSRPGAQPPYLHPAYASTRLRGPTRDPIDLPVTLLEVTGPRLDRLTLGEHAADLTAGSSG
APLGERIIVSGRVLDENGRPVRNSVVEVWQCNAAGRYQHAGDQHDAPLDPNFRGTGQVLTDEHGRYRFKTIKPGAYPWRN
AWRPAHIHFSLHGDGIGQRLVTQMYFPGDPLLAHDPIFNCVDDALARERMVSRFDWENAVSEYALAYRFDIVLRGRKQTV
WQ
>Mature_242_residues
MRDPTSDEAAIAADPLLGYRRSRPGAQPPYLHPAYASTRLRGPTRDPIDLPVTLLEVTGPRLDRLTLGEHAADLTAGSSG
APLGERIIVSGRVLDENGRPVRNSVVEVWQCNAAGRYQHAGDQHDAPLDPNFRGTGQVLTDEHGRYRFKTIKPGAYPWRN
AWRPAHIHFSLHGDGIGQRLVTQMYFPGDPLLAHDPIFNCVDDALARERMVSRFDWENAVSEYALAYRFDIVLRGRKQTV
WQ

Specific function: Plays an essential role in the utilization of numerous aromatic and hydroaromatic compounds via the beta-ketoadipate pathway [H]

COG id: COG3485

COG function: function code Q; Protocatechuate 3,4-dioxygenase beta subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the intradiol ring-cleavage dioxygenase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000627
- InterPro:   IPR015889
- InterPro:   IPR012785 [H]

Pfam domain/function: PF00775 Dioxygenase_C [H]

EC number: =1.13.11.3 [H]

Molecular weight: Translated: 27083; Mature: 27083

Theoretical pI: Translated: 7.76; Mature: 7.76

Prosite motif: PS00083 INTRADIOL_DIOXYGENAS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRDPTSDEAAIAADPLLGYRRSRPGAQPPYLHPAYASTRLRGPTRDPIDLPVTLLEVTGP
CCCCCCCCCEEECCCHHHHHHCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCEEEEEECCC
RLDRLTLGEHAADLTAGSSGAPLGERIIVSGRVLDENGRPVRNSVVEVWQCNAAGRYQHA
CCCEEECCCHHHHHCCCCCCCCCCCEEEEECEEECCCCCHHHHHHHHHHCCCCCCCCCCC
GDQHDAPLDPNFRGTGQVLTDEHGRYRFKTIKPGAYPWRNAWRPAHIHFSLHGDGIGQRL
CCCCCCCCCCCCCCCCCEEECCCCCEEEEEECCCCCCCCCCCCEEEEEEEEECCCHHHHH
VTQMYFPGDPLLAHDPIFNCVDDALARERMVSRFDWENAVSEYALAYRFDIVLRGRKQTV
HHHHCCCCCCCEECCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHEEEEEEEECCHHCC
WQ
CC
>Mature Secondary Structure
MRDPTSDEAAIAADPLLGYRRSRPGAQPPYLHPAYASTRLRGPTRDPIDLPVTLLEVTGP
CCCCCCCCCEEECCCHHHHHHCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCEEEEEECCC
RLDRLTLGEHAADLTAGSSGAPLGERIIVSGRVLDENGRPVRNSVVEVWQCNAAGRYQHA
CCCEEECCCHHHHHCCCCCCCCCCCEEEEECEEECCCCCHHHHHHHHHHCCCCCCCCCCC
GDQHDAPLDPNFRGTGQVLTDEHGRYRFKTIKPGAYPWRNAWRPAHIHFSLHGDGIGQRL
CCCCCCCCCCCCCCCCCEEECCCCCEEEEEECCCCCCCCCCCCEEEEEEEEECCCHHHHH
VTQMYFPGDPLLAHDPIFNCVDDALARERMVSRFDWENAVSEYALAYRFDIVLRGRKQTV
HHHHCCCCCCCEECCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHEEEEEEEECCHHCC
WQ
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2808303 [H]