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The map label for this gene is glnB [C]

Identifier: 84489473

GI number: 84489473

Start: 775448

End: 775786

Strand: Direct

Name: glnB [C]

Synonym: Msp_0664

Alternate gene names: 84489473

Gene position: 775448-775786 (Clockwise)

Preceding gene: 84489472

Following gene: 84489483

Centisome position: 43.87

GC content: 28.91

Gene sequence:

>339_bases
ATGAAACAAATTACAGCCATATTTAGAAATGAAAGACTAGATGCAGTAAAAGATGCACTAGAAAAAATAAACTGTAAAGG
AATTACAGTTATGGATGTAAAAGGTAGAGGAGAACAATTAGGAATTGAAGAAAACTATAGAGGAAATAGTTATAGAATTG
ATCTTCTTCCAAAAATAAAAATTGTAACAGTAGTACCTGATAATAATGTTGAAAATGTAATAACAGCAATTACAGAAGCA
GCAAAAACAGGTAATGTTGGTGATGGAAAAATATTTATTACCAATATAGATGAAGTAGTAAGAATAAGAACAAATGAACG
GGGAGACAAAGCTTTGTAA

Upstream 100 bases:

>100_bases
AATGGGTATAAGAGTAGATGAACAAACTGAAATAGAAGGTTTAGATGCAAACGAACATGAAGAAGTAGGTTACAGAATAT
AAACATAAGGATATGATACA

Downstream 100 bases:

>100_bases
CTCCCCCTAATTTCCATGATACAATGTATTCATAGGAAATTAATTGTTTATTTAACTAAATTATATTATTGAAATCTCCT
CAATAATCTTCCTCTCCGTT

Product: nitrogen regulatory protein P-II

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 112; Mature: 112

Protein sequence:

>112_residues
MKQITAIFRNERLDAVKDALEKINCKGITVMDVKGRGEQLGIEENYRGNSYRIDLLPKIKIVTVVPDNNVENVITAITEA
AKTGNVGDGKIFITNIDEVVRIRTNERGDKAL

Sequences:

>Translated_112_residues
MKQITAIFRNERLDAVKDALEKINCKGITVMDVKGRGEQLGIEENYRGNSYRIDLLPKIKIVTVVPDNNVENVITAITEA
AKTGNVGDGKIFITNIDEVVRIRTNERGDKAL
>Mature_112_residues
MKQITAIFRNERLDAVKDALEKINCKGITVMDVKGRGEQLGIEENYRGNSYRIDLLPKIKIVTVVPDNNVENVITAITEA
AKTGNVGDGKIFITNIDEVVRIRTNERGDKAL

Specific function: Could be involved in the regulation of nitrogen fixation [H]

COG id: COG0347

COG function: function code E; Nitrogen regulatory protein PII

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the P(II) protein family [H]

Homologues:

Organism=Escherichia coli, GI1788904, Length=112, Percent_Identity=47.3214285714286, Blast_Score=106, Evalue=4e-25,
Organism=Escherichia coli, GI1786655, Length=112, Percent_Identity=43.75, Blast_Score=101, Evalue=1e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002187
- InterPro:   IPR011322
- InterPro:   IPR015867
- InterPro:   IPR017918 [H]

Pfam domain/function: PF00543 P-II [H]

EC number: NA

Molecular weight: Translated: 12471; Mature: 12471

Theoretical pI: Translated: 8.47; Mature: 8.47

Prosite motif: PS00638 PII_GLNB_CTER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQITAIFRNERLDAVKDALEKINCKGITVMDVKGRGEQLGIEENYRGNSYRIDLLPKIK
CCCHHHHHHCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEEECCEE
IVTVVPDNNVENVITAITEAAKTGNVGDGKIFITNIDEVVRIRTNERGDKAL
EEEEECCCCHHHHHHHHHHHHHCCCCCCCEEEEECCCCEEEEECCCCCCCCC
>Mature Secondary Structure
MKQITAIFRNERLDAVKDALEKINCKGITVMDVKGRGEQLGIEENYRGNSYRIDLLPKIK
CCCHHHHHHCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEEECCEE
IVTVVPDNNVENVITAITEAAKTGNVGDGKIFITNIDEVVRIRTNERGDKAL
EEEEECCCCHHHHHHHHHHHHHCCCCCCCEEEEECCCCEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9371463 [H]