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The map label for this gene is rnp4

Identifier: 84489401

GI number: 84489401

Start: 691887

End: 692201

Strand: Direct

Name: rnp4

Synonym: Msp_0592

Alternate gene names: 84489401

Gene position: 691887-692201 (Clockwise)

Preceding gene: 84489400

Following gene: 84489402

Centisome position: 39.15

GC content: 32.38

Gene sequence:

>315_bases
TTGAGTAGAAGAAAACGACCTAATTGGATAAACACTATAGCACTCGAGAGGATGCAGATACTGTTTGAACAAGCAGAGAA
GGAATTTTCAAAACACCCAGAACGATCTGATCGATATGTTAAGTTAACTCGTAATATCTCTACTAAATATAATATACCAT
TACCTAATTATTGGCGAGGAAGGTTTTGTAAAAATTGTAATAAATTCCTTAAACCAGGGTCTAACTTAAGAGTAAGACTT
TCTAACAACACTATTTCTAGAAAATGTCTAGAATGTGGTGATTTAAAGAAGGTTCCTTACACTAAAAAAAACTAG

Upstream 100 bases:

>100_bases
TTATTCTTAAGTTTACTTATCTAGATTTTATGTATTTTTCATAATTTCATTCCTTGCACTTAAGAAGAATATTCTATATT
TTTTAGAGGATTAGATATTT

Downstream 100 bases:

>100_bases
GGTTATATAATAAATAAATGGAGTAATGATTAATTTGAGCAAAGTCCAGAGTAGAAAAGAGATAATGAGAAATTCTTTAA
ATGCTATTGAAATTAATATT

Product: putative ribonuclease P, subunit 4

Products: NA

Alternate protein names: RNase P component 4

Number of amino acids: Translated: 104; Mature: 103

Protein sequence:

>104_residues
MSRRKRPNWINTIALERMQILFEQAEKEFSKHPERSDRYVKLTRNISTKYNIPLPNYWRGRFCKNCNKFLKPGSNLRVRL
SNNTISRKCLECGDLKKVPYTKKN

Sequences:

>Translated_104_residues
MSRRKRPNWINTIALERMQILFEQAEKEFSKHPERSDRYVKLTRNISTKYNIPLPNYWRGRFCKNCNKFLKPGSNLRVRL
SNNTISRKCLECGDLKKVPYTKKN
>Mature_103_residues
SRRKRPNWINTIALERMQILFEQAEKEFSKHPERSDRYVKLTRNISTKYNIPLPNYWRGRFCKNCNKFLKPGSNLRVRLS
NNTISRKCLECGDLKKVPYTKKN

Specific function: Part of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends

COG id: COG2023

COG function: function code J; RNase P subunit RPR2

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the eukaryotic/archaeal RNase P protein component 4 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RNP4_METST (Q2NGR3)

Other databases:

- EMBL:   CP000102
- RefSeq:   YP_447633.1
- ProteinModelPortal:   Q2NGR3
- SMR:   Q2NGR3
- STRING:   Q2NGR3
- GeneID:   3855878
- GenomeReviews:   CP000102_GR
- KEGG:   mst:Msp_0592
- eggNOG:   arNOG12643
- HOGENOM:   HBG731499
- OMA:   IAMERIS
- BioCyc:   MSTA339860:MSP_0592-MONOMER
- HAMAP:   MF_00757
- InterPro:   IPR016432
- InterPro:   IPR007175
- PIRSF:   PIRSF004878

Pfam domain/function: PF04032 Rpr2

EC number: =3.1.26.5

Molecular weight: Translated: 12507; Mature: 12376

Theoretical pI: Translated: 11.01; Mature: 11.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.8 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
3.9 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRRKRPNWINTIALERMQILFEQAEKEFSKHPERSDRYVKLTRNISTKYNIPLPNYWRG
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCEECCCCCCCHHH
RFCKNCNKFLKPGSNLRVRLSNNTISRKCLECGDLKKVPYTKKN
HHHHHHHHHHCCCCCEEEEECCCCHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure 
SRRKRPNWINTIALERMQILFEQAEKEFSKHPERSDRYVKLTRNISTKYNIPLPNYWRG
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCEECCCCCCCHHH
RFCKNCNKFLKPGSNLRVRLSNNTISRKCLECGDLKKVPYTKKN
HHHHHHHHHHCCCCCEEEEECCCCHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA