Definition | Methanosphaera stadtmanae DSM 3091 chromosome, complete genome. |
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Accession | NC_007681 |
Length | 1,767,403 |
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The map label for this gene is 84489398
Identifier: 84489398
GI number: 84489398
Start: 680813
End: 681358
Strand: Direct
Name: 84489398
Synonym: Msp_0589
Alternate gene names: NA
Gene position: 680813-681358 (Clockwise)
Preceding gene: 84489397
Following gene: 84489399
Centisome position: 38.52
GC content: 27.47
Gene sequence:
>546_bases ATGATGATTATAATTACAGGTACTCCAGGTACAGGTAAAACTACTGTAACAAAAATATTAAAGAATAAAATTAATGCTAA ATTAATTAGTATTAATAGTTTACTTGAGAGTTATGATTTAACTTTAGGTACTGATGAAGTACGAGGATATAAAATAGTTG ATACTATTGAAATGATTCCTATTGTTAATAAAATCAGAAAAGAATGTGGTGATAATCTTCTTATATTTGAAGGACATTTA GCACAAGACTATCCAAGTAGTGATATGGTTGTTGTTTTAAGATGTAATCCTGATATTCTTAAAAAACGATTAGATAGTCG TAATTGGCCTGAAAAAAAGGTTAAAGAGAATGTTAGTGCTGAGATTTTAGGTGTTTGTACAAGTGAAAGTTATGAAACTT ATGGAGATATTGTTCAAGAAGTGGAAACATCTAATTTAACACCAGATGAGGTTGCAGATATATTGATAGATATCATTAAT AAAAAGATAGAATATCCTTTAGGTATTATTGATTATCTTGGAGATTACTTCACATATCTTGATTAA
Upstream 100 bases:
>100_bases TGTATCATCAGATCCTAATGAAATAAGAAATGTTATAAGAACATTATAAGTTCATATAACTTCCACTTTTTTTTATTAAA AAAAAAATCTTTTGATTATT
Downstream 100 bases:
>100_bases TTTTTTATTTTTTTAATAATATTACTTTTTTTAAAATGATTCTGGACGTTTCATGTTCAAATAATATTTATTTGCTGAAT ATTACGTGTATCTTTCTTTT
Product: nucleotide kinase
Products: NA
Alternate protein names: ATP-AMP transphosphorylase [H]
Number of amino acids: Translated: 181; Mature: 181
Protein sequence:
>181_residues MMIIITGTPGTGKTTVTKILKNKINAKLISINSLLESYDLTLGTDEVRGYKIVDTIEMIPIVNKIRKECGDNLLIFEGHL AQDYPSSDMVVVLRCNPDILKKRLDSRNWPEKKVKENVSAEILGVCTSESYETYGDIVQEVETSNLTPDEVADILIDIIN KKIEYPLGIIDYLGDYFTYLD
Sequences:
>Translated_181_residues MMIIITGTPGTGKTTVTKILKNKINAKLISINSLLESYDLTLGTDEVRGYKIVDTIEMIPIVNKIRKECGDNLLIFEGHL AQDYPSSDMVVVLRCNPDILKKRLDSRNWPEKKVKENVSAEILGVCTSESYETYGDIVQEVETSNLTPDEVADILIDIIN KKIEYPLGIIDYLGDYFTYLD >Mature_181_residues MMIIITGTPGTGKTTVTKILKNKINAKLISINSLLESYDLTLGTDEVRGYKIVDTIEMIPIVNKIRKECGDNLLIFEGHL AQDYPSSDMVVVLRCNPDILKKRLDSRNWPEKKVKENVSAEILGVCTSESYETYGDIVQEVETSNLTPDEVADILIDIIN KKIEYPLGIIDYLGDYFTYLD
Specific function: Unknown
COG id: COG1936
COG function: function code F; Predicted nucleotide kinase (related to CMP and AMP kinases)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the adenylate kinase family. AK6 subfamily [H]
Homologues:
Organism=Homo sapiens, GI7706212, Length=164, Percent_Identity=32.3170731707317, Blast_Score=69, Evalue=3e-12, Organism=Homo sapiens, GI62865612, Length=160, Percent_Identity=31.875, Blast_Score=64, Evalue=9e-11, Organism=Caenorhabditis elegans, GI17532769, Length=144, Percent_Identity=31.9444444444444, Blast_Score=74, Evalue=5e-14, Organism=Saccharomyces cerevisiae, GI6320035, Length=135, Percent_Identity=34.8148148148148, Blast_Score=80, Evalue=2e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020618 [H]
Pfam domain/function: NA
EC number: =2.7.4.3 [H]
Molecular weight: Translated: 20380; Mature: 20380
Theoretical pI: Translated: 4.43; Mature: 4.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMIIITGTPGTGKTTVTKILKNKINAKLISINSLLESYDLTLGTDEVRGYKIVDTIEMIP CEEEEECCCCCCHHHHHHHHHHHHCCEEEHHHHHHHHHCCCCCCCCCCCEEHHHHHHHHH IVNKIRKECGDNLLIFEGHLAQDYPSSDMVVVLRCNPDILKKRLDSRNWPEKKVKENVSA HHHHHHHHHCCCEEEEECCCCCCCCCCCCEEEEECCHHHHHHHHCCCCCCHHHHHHCCCE EILGVCTSESYETYGDIVQEVETSNLTPDEVADILIDIINKKIEYPLGIIDYLGDYFTYL EEEEEECCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHC D C >Mature Secondary Structure MMIIITGTPGTGKTTVTKILKNKINAKLISINSLLESYDLTLGTDEVRGYKIVDTIEMIP CEEEEECCCCCCHHHHHHHHHHHHCCEEEHHHHHHHHHCCCCCCCCCCCEEHHHHHHHHH IVNKIRKECGDNLLIFEGHLAQDYPSSDMVVVLRCNPDILKKRLDSRNWPEKKVKENVSA HHHHHHHHHCCCEEEEECCCCCCCCCCCCEEEEECCHHHHHHHHCCCCCCHHHHHHCCCE EILGVCTSESYETYGDIVQEVETSNLTPDEVADILIDIINKKIEYPLGIIDYLGDYFTYL EEEEEECCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHC D C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9371463 [H]