Definition Methanosphaera stadtmanae DSM 3091 chromosome, complete genome.
Accession NC_007681
Length 1,767,403

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The map label for this gene is 84489370

Identifier: 84489370

GI number: 84489370

Start: 652251

End: 652991

Strand: Direct

Name: 84489370

Synonym: Msp_0560

Alternate gene names: NA

Gene position: 652251-652991 (Clockwise)

Preceding gene: 84489369

Following gene: 84489371

Centisome position: 36.9

GC content: 27.4

Gene sequence:

>741_bases
ATGTTAAATAAAGATCATCCTAGATATCAATCATTAGTATATAGAGAAAAAATTGTAGAAGCACATGAAAATGGAATCCT
TGCAGATTCTGGTATGATAGCTCATGGACGTGGAGAGACATTTGATTATTTAATTGGTGAAAAAACAACTCCCAACTCAC
AAAATACTATTGATGTAGCAGCATGCTATTTTTTAACAAGAAAACATCCAGTTTTAAGTGTAAATGGTAATACTACAGCT
TTAGTAAGTGAAGATATAGCTAAATTATCAGAATTATTGGATATTCCAGTAGAAATTAATTTATATTACAGAACACCTGA
ACGAATAGAAAATATAGAAAGAGTATATAAGGATTTGGGTGTGAAAGAAATTTTAGGTACTGATGAAGATGATTTTATAG
ACACTCCTAATCTTAATGGTCCAAGATCACCTGTGAGTATTGAAGGTATTAAAAAATCAGATTTAGTTTTTATTCCATTA
GAAGATGGAGATAGAGCAGAAAAACTATATGATTTAGGTAAAGACATAATAAGTGTTGATTTAAATCCATTATCTAGAAC
AGCACAAACATCAACAGTAACAATAGTAGATAATATTGTAAGAGTAATACCGGCATTAATTGAATCTGTAAAAAAATATG
AAAACTATGATAAAACTGACATCCAAGAAAAAATAGATCTATTTAATAATAAAACTAATTTAAATATAGCAATAAAGGAT
ATTATAAAAAGATTTGAATAA

Upstream 100 bases:

>100_bases
TCAAATATTTACATTCTATTTTTTCTAATTAATATTAAACAATAAATTTTTCCACATATATACTAAACTTCTAAATATTA
GAAAGTACTTATCTTATTAT

Downstream 100 bases:

>100_bases
AACAAGAAGGAGTAGTAATATTGAAAGTTTTTGGAGTAACAGGTCTTCCAGGTTCTGGTAAAAGTATTATTTCACGTATA
GCTAAAAAAGAGGGAATTTA

Product: hypothetical protein

Products: NA

Alternate protein names: PS; Pantoate--beta-alanine ligase; Pantoate-activating enzyme [H]

Number of amino acids: Translated: 246; Mature: 246

Protein sequence:

>246_residues
MLNKDHPRYQSLVYREKIVEAHENGILADSGMIAHGRGETFDYLIGEKTTPNSQNTIDVAACYFLTRKHPVLSVNGNTTA
LVSEDIAKLSELLDIPVEINLYYRTPERIENIERVYKDLGVKEILGTDEDDFIDTPNLNGPRSPVSIEGIKKSDLVFIPL
EDGDRAEKLYDLGKDIISVDLNPLSRTAQTSTVTIVDNIVRVIPALIESVKKYENYDKTDIQEKIDLFNNKTNLNIAIKD
IIKRFE

Sequences:

>Translated_246_residues
MLNKDHPRYQSLVYREKIVEAHENGILADSGMIAHGRGETFDYLIGEKTTPNSQNTIDVAACYFLTRKHPVLSVNGNTTA
LVSEDIAKLSELLDIPVEINLYYRTPERIENIERVYKDLGVKEILGTDEDDFIDTPNLNGPRSPVSIEGIKKSDLVFIPL
EDGDRAEKLYDLGKDIISVDLNPLSRTAQTSTVTIVDNIVRVIPALIESVKKYENYDKTDIQEKIDLFNNKTNLNIAIKD
IIKRFE
>Mature_246_residues
MLNKDHPRYQSLVYREKIVEAHENGILADSGMIAHGRGETFDYLIGEKTTPNSQNTIDVAACYFLTRKHPVLSVNGNTTA
LVSEDIAKLSELLDIPVEINLYYRTPERIENIERVYKDLGVKEILGTDEDDFIDTPNLNGPRSPVSIEGIKKSDLVFIPL
EDGDRAEKLYDLGKDIISVDLNPLSRTAQTSTVTIVDNIVRVIPALIESVKKYENYDKTDIQEKIDLFNNKTNLNIAIKD
IIKRFE

Specific function: Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent and ADP-producing reaction [H]

COG id: COG1701

COG function: function code S; Uncharacterized protein conserved in archaea

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the archaeal pantothenate synthetase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002855
- ProDom:   PD016827 [H]

Pfam domain/function: PF02006 DUF137 [H]

EC number: NA

Molecular weight: Translated: 27823; Mature: 27823

Theoretical pI: Translated: 4.63; Mature: 4.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNKDHPRYQSLVYREKIVEAHENGILADSGMIAHGRGETFDYLIGEKTTPNSQNTIDVA
CCCCCCCHHHHHHHHHHHHHHHCCCEEECCCEEECCCCCCEEHCCCCCCCCCCCCHHHHH
ACYFLTRKHPVLSVNGNTTALVSEDIAKLSELLDIPVEINLYYRTPERIENIERVYKDLG
HHHHHHCCCCEEEECCCEEEEHHHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHHHHHCC
VKEILGTDEDDFIDTPNLNGPRSPVSIEGIKKSDLVFIPLEDGDRAEKLYDLGKDIISVD
HHHHHCCCCCCCCCCCCCCCCCCCCEECCCCCCCEEEEECCCCCHHHHHHHHCHHHEEEC
LNPLSRTAQTSTVTIVDNIVRVIPALIESVKKYENYDKTDIQEKIDLFNNKTNLNIAIKD
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCEEEHHH
IIKRFE
HHHHCC
>Mature Secondary Structure
MLNKDHPRYQSLVYREKIVEAHENGILADSGMIAHGRGETFDYLIGEKTTPNSQNTIDVA
CCCCCCCHHHHHHHHHHHHHHHCCCEEECCCEEECCCCCCEEHCCCCCCCCCCCCHHHHH
ACYFLTRKHPVLSVNGNTTALVSEDIAKLSELLDIPVEINLYYRTPERIENIERVYKDLG
HHHHHHCCCCEEEECCCEEEEHHHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHHHHHCC
VKEILGTDEDDFIDTPNLNGPRSPVSIEGIKKSDLVFIPLEDGDRAEKLYDLGKDIISVD
HHHHHCCCCCCCCCCCCCCCCCCCCEECCCCCCCEEEEECCCCCHHHHHHHHCHHHEEEC
LNPLSRTAQTSTVTIVDNIVRVIPALIESVKKYENYDKTDIQEKIDLFNNKTNLNIAIKD
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCEEEHHH
IIKRFE
HHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]