Definition | Methanosphaera stadtmanae DSM 3091 chromosome, complete genome. |
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Accession | NC_007681 |
Length | 1,767,403 |
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The map label for this gene is 84489354
Identifier: 84489354
GI number: 84489354
Start: 637727
End: 638458
Strand: Direct
Name: 84489354
Synonym: Msp_0544
Alternate gene names: NA
Gene position: 637727-638458 (Clockwise)
Preceding gene: 84489353
Following gene: 84489355
Centisome position: 36.08
GC content: 29.92
Gene sequence:
>732_bases ATGACAAAGATTGTCCACATTTCTGATTTACACACTGGTTATGCTCAATTTAGAGAAGATCTTCTACTTCAAACAATCGA TGAAATAAACAAAATACAACCATCAGCCGTAGTAATATCTGGAGATTTAACTGATCAAGGATTTTATAGGGAATTTATAG AAGCAAAGGAATATATAGACTTAATACAACCGAAAACATTGATAGTTCCTGGAAACCATGATGCACGAAACATTGGTGAC ACAGTATTTGAGGAATTATTCGGTAAAAGATACAGTGTACTTGAATTAAAAGAAGAAGCAATAAAAATAATTGGTTTGGA TAGTAGTGAACCAGATTTAGGACATGGAAAGATTGGTAGATTACAAAAAAAGTTTATGGAAGATGAAATAGCTGATGCAA AAGAAAAAGGATTATTTATCATAATAGTACTACATCATCATATAATATCAATACCAAATACTGGTAGGGAAAGAAATATT TTAAGTGATGCAGGAGATATCTTACTAACAATATTAGAAAACAATGTAAACTTAGTATTATCAGGACATAAACATGTACC ACATGCTTGGAAGATGAATAATACACTATTTGCAACTGCAGGAACAGTTTCATCTATGAAGTTACGTGGAAATACATGTC CATCATACAATGTAATTGATATTAATAATCAGTATATTGAAATAATGTTACATAATTCTAATGGAACAATAAAACCATTA AGACATCCATAA
Upstream 100 bases:
>100_bases TTAGTAGCATCACAAACTGGAAAATCAAAATCTGAAGCTCAAAAAGTTCTTGAAGAAACTAATGGTGACTTAGCAGAAGC AATTATGAGGTTATCATAAA
Downstream 100 bases:
>100_bases CACTAATTCCATATAATTTAAAAAAGTAAATATATCAAAAATAATATAAATATATTAATAAATAAATTAGAAAATTTTAA AATAAATAGAATAAAAAAAG
Product: phosphohydrolase
Products: NA
Alternate protein names: Phosphohydrolase; 3 5'-Cyclic-Nucleotide Phosphodiesterase; LacZ Expression Regulatory Protein; 3 5-Cyclic-Nucleotide Phosphodiesterase; Icc Related Protein; Transcriptional Regulator Icc Related Protein; Calcineurin Superfamily Metallophosphoesterase; Phosphohydrolase Calcineurin-Like Superfamily; DNA Repair Exonuclease; Calcineurin Superfamily Phosphohydrolase; Metallo-Phosphoesterase
Number of amino acids: Translated: 243; Mature: 242
Protein sequence:
>243_residues MTKIVHISDLHTGYAQFREDLLLQTIDEINKIQPSAVVISGDLTDQGFYREFIEAKEYIDLIQPKTLIVPGNHDARNIGD TVFEELFGKRYSVLELKEEAIKIIGLDSSEPDLGHGKIGRLQKKFMEDEIADAKEKGLFIIIVLHHHIISIPNTGRERNI LSDAGDILLTILENNVNLVLSGHKHVPHAWKMNNTLFATAGTVSSMKLRGNTCPSYNVIDINNQYIEIMLHNSNGTIKPL RHP
Sequences:
>Translated_243_residues MTKIVHISDLHTGYAQFREDLLLQTIDEINKIQPSAVVISGDLTDQGFYREFIEAKEYIDLIQPKTLIVPGNHDARNIGD TVFEELFGKRYSVLELKEEAIKIIGLDSSEPDLGHGKIGRLQKKFMEDEIADAKEKGLFIIIVLHHHIISIPNTGRERNI LSDAGDILLTILENNVNLVLSGHKHVPHAWKMNNTLFATAGTVSSMKLRGNTCPSYNVIDINNQYIEIMLHNSNGTIKPL RHP >Mature_242_residues TKIVHISDLHTGYAQFREDLLLQTIDEINKIQPSAVVISGDLTDQGFYREFIEAKEYIDLIQPKTLIVPGNHDARNIGDT VFEELFGKRYSVLELKEEAIKIIGLDSSEPDLGHGKIGRLQKKFMEDEIADAKEKGLFIIIVLHHHIISIPNTGRERNIL SDAGDILLTILENNVNLVLSGHKHVPHAWKMNNTLFATAGTVSSMKLRGNTCPSYNVIDINNQYIEIMLHNSNGTIKPLR HP
Specific function: Unknown
COG id: COG1409
COG function: function code R; Predicted phosphohydrolases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27352; Mature: 27221
Theoretical pI: Translated: 6.37; Mature: 6.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKIVHISDLHTGYAQFREDLLLQTIDEINKIQPSAVVISGDLTDQGFYREFIEAKEYID CCEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHH LIQPKTLIVPGNHDARNIGDTVFEELFGKRYSVLELKEEAIKIIGLDSSEPDLGHGKIGR HCCCCEEEEECCCCCHHHHHHHHHHHHCCCCHHHHHHHHEEEEEECCCCCCCCCCCHHHH LQKKFMEDEIADAKEKGLFIIIVLHHHIISIPNTGRERNILSDAGDILLTILENNVNLVL HHHHHHHHHHHHHHHCCEEEEEEECCCEEECCCCCCCCCHHHCCHHEEEEEEECCEEEEE SGHKHVPHAWKMNNTLFATAGTVSSMKLRGNTCPSYNVIDINNQYIEIMLHNSNGTIKPL ECCCCCCCEEECCCEEEEECCCCEEEEECCCCCCCCEEEECCCEEEEEEEECCCCCCCCC RHP CCC >Mature Secondary Structure TKIVHISDLHTGYAQFREDLLLQTIDEINKIQPSAVVISGDLTDQGFYREFIEAKEYID CEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHH LIQPKTLIVPGNHDARNIGDTVFEELFGKRYSVLELKEEAIKIIGLDSSEPDLGHGKIGR HCCCCEEEEECCCCCHHHHHHHHHHHHCCCCHHHHHHHHEEEEEECCCCCCCCCCCHHHH LQKKFMEDEIADAKEKGLFIIIVLHHHIISIPNTGRERNILSDAGDILLTILENNVNLVL HHHHHHHHHHHHHHHCCEEEEEEECCCEEECCCCCCCCCHHHCCHHEEEEEEECCEEEEE SGHKHVPHAWKMNNTLFATAGTVSSMKLRGNTCPSYNVIDINNQYIEIMLHNSNGTIKPL ECCCCCCCEEECCCEEEEECCCCEEEEECCCCCCCCEEEECCCEEEEEEEECCCCCCCCC RHP CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA