Definition Methanosphaera stadtmanae DSM 3091 chromosome, complete genome.
Accession NC_007681
Length 1,767,403

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The map label for this gene is 84489337

Identifier: 84489337

GI number: 84489337

Start: 622494

End: 622901

Strand: Direct

Name: 84489337

Synonym: Msp_0527

Alternate gene names: NA

Gene position: 622494-622901 (Clockwise)

Preceding gene: 84489332

Following gene: 84489338

Centisome position: 35.22

GC content: 30.15

Gene sequence:

>408_bases
TTGGAGGTAAATAATATGAAACCACCATGTGAAATAGTAGTATGGTATGTAATACCATCAATACGTTCAAAACTTGCAAA
AGAATTATTAAACCTTGGAATGAAACAAAAAGATATCTCAGAACTACTAGATATAACACAACCTGCAGTATCACAATATA
TTAGTGATAAAAGAGGGCATGAACTAGATTTTGATCCTGTTGTAGAACAATATATAAAAAATATGGCAAGAGACATAAAA
AATGGGGAATTAGAACCAATAGATTTAATACCAAGATTCTGTCACATATGTAAAACAATAAAAACAAAGGAAATTCTCTG
TCAAATACATAAAGAAAAGGTTAATATTCCACAATCATGTAGTGTGTGTATGGGAAGTGAATCATCAGATGGATGTGGAT
TCATATAG

Upstream 100 bases:

>100_bases
GTGAATAATATATATAGAAAGTAATTCATAAATATATAATGAAAATAAGTAGATTATAAATAAATAAAATTATACTAAAA
TACTAACTTTAATTATATCT

Downstream 100 bases:

>100_bases
ACATATACACTTTTTTTTCTATTTTTACTTGTAGAAAATATATTTCTACAATAATTTTTAAAATTTAATTGTTGTAAAAT
CATATTTTTAAAATTTTTTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 135; Mature: 135

Protein sequence:

>135_residues
MEVNNMKPPCEIVVWYVIPSIRSKLAKELLNLGMKQKDISELLDITQPAVSQYISDKRGHELDFDPVVEQYIKNMARDIK
NGELEPIDLIPRFCHICKTIKTKEILCQIHKEKVNIPQSCSVCMGSESSDGCGFI

Sequences:

>Translated_135_residues
MEVNNMKPPCEIVVWYVIPSIRSKLAKELLNLGMKQKDISELLDITQPAVSQYISDKRGHELDFDPVVEQYIKNMARDIK
NGELEPIDLIPRFCHICKTIKTKEILCQIHKEKVNIPQSCSVCMGSESSDGCGFI
>Mature_135_residues
MEVNNMKPPCEIVVWYVIPSIRSKLAKELLNLGMKQKDISELLDITQPAVSQYISDKRGHELDFDPVVEQYIKNMARDIK
NGELEPIDLIPRFCHICKTIKTKEILCQIHKEKVNIPQSCSVCMGSESSDGCGFI

Specific function: Unknown

COG id: COG2522

COG function: function code R; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15351; Mature: 15351

Theoretical pI: Translated: 6.25; Mature: 6.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.2 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
8.9 %Cys+Met (Translated Protein)
5.2 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
8.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEVNNMKPPCEIVVWYVIPSIRSKLAKELLNLGMKQKDISELLDITQPAVSQYISDKRGH
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCC
ELDFDPVVEQYIKNMARDIKNGELEPIDLIPRFCHICKTIKTKEILCQIHKEKVNIPQSC
CCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
SVCMGSESSDGCGFI
HHHCCCCCCCCCCCC
>Mature Secondary Structure
MEVNNMKPPCEIVVWYVIPSIRSKLAKELLNLGMKQKDISELLDITQPAVSQYISDKRGH
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCC
ELDFDPVVEQYIKNMARDIKNGELEPIDLIPRFCHICKTIKTKEILCQIHKEKVNIPQSC
CCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
SVCMGSESSDGCGFI
HHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA