Click here to switch to the map view.

The map label for this gene is mcrC

Identifier: 84489120

GI number: 84489120

Start: 360490

End: 361101

Strand: Direct

Name: mcrC

Synonym: Msp_0299

Alternate gene names: 84489120

Gene position: 360490-361101 (Clockwise)

Preceding gene: 84489117

Following gene: 84489121

Centisome position: 20.4

GC content: 33.82

Gene sequence:

>612_bases
ATGATAGAAATGATTGGAAAAAATACACATATAGTTGACTGTAGGGAAACACGCGGAATAGGTGAAGGTGGTGGAATTGC
TCAGCGTGGAACATATGCACAATGTGGGGATGAATTACTTGCTGTTGCAATGTCTCCAGGACGTAGACATATTACAAAAC
CAGTTTGTGAAATAACATTTGCTCTAAGAGAATCAAATATTCAAACAAGTACCTTGGTTCTTAATGCAGGTTCTGGAGTA
CCAAAAGACACGCCTAGTGGTGGAGGACAAGGTTTATTTGGTGTAACTCCTAAGGAAATTTCCCAGATGAGTAGACATAA
TATTGTATTGTTCCATTTTGGAGGAGTAAAAAATCATATAATATACAAGGCAAAACATGCTCTTAAACATATTAATAAAC
CTGTTATTATTATAGCACAATATCCATTGGATTTTGAAGATTTTGCAAAAATAGGAGTAAATACTGTTGCAGTAAAACCT
GAAAAATCTGAAACACAGGGTACTATTGTTGAACTCATAACTGATGTTATTCGTGGAGAATCATGTACTCAAGAGAAATT
AGATGAAATAATAAATAAAGTGGAAACATCCATTGTAAAATATACTAAGTAA

Upstream 100 bases:

>100_bases
TATATTTTAAAAATAATTTTAAATAATAATATAATGGATGTAATCCATATCTATATAGTATATATGATAATATTTTGAGA
ACATATTAATCAAAGGTTGC

Downstream 100 bases:

>100_bases
TTTGGAGAAATTATATGGAAATTTTCAACATGTTTTTAGTTATTTTAATGGGATTATTTGCAATTATTGCAGGAATATTT
GAAGATTTAGAATCTGATGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 203; Mature: 203

Protein sequence:

>203_residues
MIEMIGKNTHIVDCRETRGIGEGGGIAQRGTYAQCGDELLAVAMSPGRRHITKPVCEITFALRESNIQTSTLVLNAGSGV
PKDTPSGGGQGLFGVTPKEISQMSRHNIVLFHFGGVKNHIIYKAKHALKHINKPVIIIAQYPLDFEDFAKIGVNTVAVKP
EKSETQGTIVELITDVIRGESCTQEKLDEIINKVETSIVKYTK

Sequences:

>Translated_203_residues
MIEMIGKNTHIVDCRETRGIGEGGGIAQRGTYAQCGDELLAVAMSPGRRHITKPVCEITFALRESNIQTSTLVLNAGSGV
PKDTPSGGGQGLFGVTPKEISQMSRHNIVLFHFGGVKNHIIYKAKHALKHINKPVIIIAQYPLDFEDFAKIGVNTVAVKP
EKSETQGTIVELITDVIRGESCTQEKLDEIINKVETSIVKYTK
>Mature_203_residues
MIEMIGKNTHIVDCRETRGIGEGGGIAQRGTYAQCGDELLAVAMSPGRRHITKPVCEITFALRESNIQTSTLVLNAGSGV
PKDTPSGGGQGLFGVTPKEISQMSRHNIVLFHFGGVKNHIIYKAKHALKHINKPVIIIAQYPLDFEDFAKIGVNTVAVKP
EKSETQGTIVELITDVIRGESCTQEKLDEIINKVETSIVKYTK

Specific function: Unknown

COG id: COG4056

COG function: function code H; Methyl coenzyme M reductase, subunit C

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007687 [H]

Pfam domain/function: PF04609 MCR_C [H]

EC number: NA

Molecular weight: Translated: 22111; Mature: 22111

Theoretical pI: Translated: 8.33; Mature: 8.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIEMIGKNTHIVDCRETRGIGEGGGIAQRGTYAQCGDELLAVAMSPGRRHITKPVCEITF
CCEECCCCCEEEECHHHCCCCCCCCCCCCCCHHHHHHHHEEECCCCCCHHHHHHHHHHHH
ALRESNIQTSTLVLNAGSGVPKDTPSGGGQGLFGVTPKEISQMSRHNIVLFHFGGVKNHI
HHHHCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCEEEEEECCCCCHH
IYKAKHALKHINKPVIIIAQYPLDFEDFAKIGVNTVAVKPEKSETQGTIVELITDVIRGE
HHHHHHHHHHCCCCEEEEEECCCCHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHCCC
SCTQEKLDEIINKVETSIVKYTK
CCCHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MIEMIGKNTHIVDCRETRGIGEGGGIAQRGTYAQCGDELLAVAMSPGRRHITKPVCEITF
CCEECCCCCEEEECHHHCCCCCCCCCCCCCCHHHHHHHHEEECCCCCCHHHHHHHHHHHH
ALRESNIQTSTLVLNAGSGVPKDTPSGGGQGLFGVTPKEISQMSRHNIVLFHFGGVKNHI
HHHHCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCEEEEEECCCCCHH
IYKAKHALKHINKPVIIIAQYPLDFEDFAKIGVNTVAVKPEKSETQGTIVELITDVIRGE
HHHHHHHHHHCCCCEEEEEECCCCHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHCCC
SCTQEKLDEIINKVETSIVKYTK
CCCHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7929010; 9371463 [H]