Definition Methanosphaera stadtmanae DSM 3091 chromosome, complete genome.
Accession NC_007681
Length 1,767,403

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The map label for this gene is 84489084

Identifier: 84489084

GI number: 84489084

Start: 319889

End: 321088

Strand: Direct

Name: 84489084

Synonym: Msp_0257

Alternate gene names: NA

Gene position: 319889-321088 (Clockwise)

Preceding gene: 84489080

Following gene: 84489085

Centisome position: 18.1

GC content: 23.08

Gene sequence:

>1200_bases
ATGGTTGATAATAAATTAAATAAAAAATGGAAAGAAGATTTCTTTGAAATATTTGCAACAAAATCAGATGTTAAAGAGTT
GGAAAATGCTGATAAAATTAAAATAGAACATTTTCCACCAGTATTAGGACAGTATTATCCAAGTAATATAGATGAAGATA
CACTCATTAAACTATGTGAAGGTAAATTATTTTTGACTAAATCAAAAAAACAACCTGATTATGATGATTCACTTATAAAA
ATAGATTATGAAAAAGTTATAAAAACACAATTAAACACATTAATGCAACAACAAATAGCTAAGTTACAAGAAGAAGATCC
AAATTTCTTAAAGGATGATGAAAAGGAAATAATTAAGAAGTCATCATTTCCATTTATAAAATTAATGACTCTTGTATATT
CTAAGGATACAAAGGATATGTCTTGTAATGATCAAAAACAATGGAAAGAATATATGAATCAATTTATTACCCAACAAATA
GTTTTTTCAATAGTTAATACATATTATACAATGAAATTATATCAGGATAATATATACACAACCCTATTTCAAACACCATA
TAATAAGGATTATGTATGGAAGGAATATGGATATAATCATGAAGGAATCTGTGTAACATATAACTTTAAAGAAATAAGAA
AAATAATAATAGAACAATTACAGAAAATATTCCCAGTATACTATATTAACAGTAAATCTGACATAAATTATGATGTATAC
AACTCTGTATATGCATCACTTCTTAAAACAAAAGATAAAATAAATACATATGATAATCAATGGGTATATATAATGAGTTA
TAAATATACTGAAACTGAATATACGATGTTAGATAATTTATTAGAACCAGTATACACATATTCAATGACACATTCTAAAA
TAAATGAAATATTAAATGGAAATTATCTTGAAATTAAAGATAATCAACTTAACTATAACTATAAAAAATTAATAGAAAAT
CTAGTTGATGTTCTCAATTCAAATGAATTTCAAGAAGAACTTAATACTAAACTTCAAGAAGTATATGATATTACTCAAAA
TAATATTGATATAGACTTTATGAAACCAGAAGCAGTATATCTTGGAAGGGATTTTCCAGAAGAAAAAATAAAACAAATCA
AGGAAATAGTACAAAAAGAAGATATCATGATTTTTAAAATTAAACAATCAGAAGATAAACTATTTAAAGCATTAATATAG

Upstream 100 bases:

>100_bases
AAAAAATACAAATCATAATATACATAACTAAGAAGAAATTAAAAAAACTATTATAATTATACATATAATAAAAAAATGGA
TTCTAAAAACGGGTGATAAA

Downstream 100 bases:

>100_bases
GGATATACATGACAAATACTTCTTATGAAAAATTAGTTGAGGTATATGAAAAAATCAGTAGTACATCAAGTCGTCTAGAA
AAACAAGATATTATAGCCGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 399; Mature: 399

Protein sequence:

>399_residues
MVDNKLNKKWKEDFFEIFATKSDVKELENADKIKIEHFPPVLGQYYPSNIDEDTLIKLCEGKLFLTKSKKQPDYDDSLIK
IDYEKVIKTQLNTLMQQQIAKLQEEDPNFLKDDEKEIIKKSSFPFIKLMTLVYSKDTKDMSCNDQKQWKEYMNQFITQQI
VFSIVNTYYTMKLYQDNIYTTLFQTPYNKDYVWKEYGYNHEGICVTYNFKEIRKIIIEQLQKIFPVYYINSKSDINYDVY
NSVYASLLKTKDKINTYDNQWVYIMSYKYTETEYTMLDNLLEPVYTYSMTHSKINEILNGNYLEIKDNQLNYNYKKLIEN
LVDVLNSNEFQEELNTKLQEVYDITQNNIDIDFMKPEAVYLGRDFPEEKIKQIKEIVQKEDIMIFKIKQSEDKLFKALI

Sequences:

>Translated_399_residues
MVDNKLNKKWKEDFFEIFATKSDVKELENADKIKIEHFPPVLGQYYPSNIDEDTLIKLCEGKLFLTKSKKQPDYDDSLIK
IDYEKVIKTQLNTLMQQQIAKLQEEDPNFLKDDEKEIIKKSSFPFIKLMTLVYSKDTKDMSCNDQKQWKEYMNQFITQQI
VFSIVNTYYTMKLYQDNIYTTLFQTPYNKDYVWKEYGYNHEGICVTYNFKEIRKIIIEQLQKIFPVYYINSKSDINYDVY
NSVYASLLKTKDKINTYDNQWVYIMSYKYTETEYTMLDNLLEPVYTYSMTHSKINEILNGNYLEIKDNQLNYNYKKLIEN
LVDVLNSNEFQEELNTKLQEVYDITQNNIDIDFMKPEAVYLGRDFPEEKIKQIKEIVQKEDIMIFKIKQSEDKLFKALI
>Mature_399_residues
MVDNKLNKKWKEDFFEIFATKSDVKELENADKIKIEHFPPVLGQYYPSNIDEDTLIKLCEGKLFLTKSKKQPDYDDSLIK
IDYEKVIKTQLNTLMQQQIAKLQEEDPNFLKDDEKEIIKKSSFPFIKLMTLVYSKDTKDMSCNDQKQWKEYMNQFITQQI
VFSIVNTYYTMKLYQDNIYTTLFQTPYNKDYVWKEYGYNHEGICVTYNFKEIRKIIIEQLQKIFPVYYINSKSDINYDVY
NSVYASLLKTKDKINTYDNQWVYIMSYKYTETEYTMLDNLLEPVYTYSMTHSKINEILNGNYLEIKDNQLNYNYKKLIEN
LVDVLNSNEFQEELNTKLQEVYDITQNNIDIDFMKPEAVYLGRDFPEEKIKQIKEIVQKEDIMIFKIKQSEDKLFKALI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47962; Mature: 47962

Theoretical pI: Translated: 4.86; Mature: 4.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVDNKLNKKWKEDFFEIFATKSDVKELENADKIKIEHFPPVLGQYYPSNIDEDTLIKLCE
CCCCHHHHHHHHHHHHHHHCHHHHHHHCCCCCEEEECCCCHHHCCCCCCCCHHHHHHHHC
GKLFLTKSKKQPDYDDSLIKIDYEKVIKTQLNTLMQQQIAKLQEEDPNFLKDDEKEIIKK
CCEEEEECCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH
SSFPFIKLMTLVYSKDTKDMSCNDQKQWKEYMNQFITQQIVFSIVNTYYTMKLYQDNIYT
CCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCEE
TLFQTPYNKDYVWKEYGYNHEGICVTYNFKEIRKIIIEQLQKIFPVYYINSKSDINYDVY
EEECCCCCCCCCCHHCCCCCCCEEEEECHHHHHHHHHHHHHHHCCEEEECCCCCCCHHHH
NSVYASLLKTKDKINTYDNQWVYIMSYKYTETEYTMLDNLLEPVYTYSMTHSKINEILNG
HHHHHHHHHHHHHCCCCCCCEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
NYLEIKDNQLNYNYKKLIENLVDVLNSNEFQEELNTKLQEVYDITQNNIDIDFMKPEAVY
CEEEEECCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCEEE
LGRDFPEEKIKQIKEIVQKEDIMIFKIKQSEDKLFKALI
ECCCCCHHHHHHHHHHHHHCCEEEEEEECCHHHHHHHCC
>Mature Secondary Structure
MVDNKLNKKWKEDFFEIFATKSDVKELENADKIKIEHFPPVLGQYYPSNIDEDTLIKLCE
CCCCHHHHHHHHHHHHHHHCHHHHHHHCCCCCEEEECCCCHHHCCCCCCCCHHHHHHHHC
GKLFLTKSKKQPDYDDSLIKIDYEKVIKTQLNTLMQQQIAKLQEEDPNFLKDDEKEIIKK
CCEEEEECCCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH
SSFPFIKLMTLVYSKDTKDMSCNDQKQWKEYMNQFITQQIVFSIVNTYYTMKLYQDNIYT
CCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCEE
TLFQTPYNKDYVWKEYGYNHEGICVTYNFKEIRKIIIEQLQKIFPVYYINSKSDINYDVY
EEECCCCCCCCCCHHCCCCCCCEEEEECHHHHHHHHHHHHHHHCCEEEECCCCCCCHHHH
NSVYASLLKTKDKINTYDNQWVYIMSYKYTETEYTMLDNLLEPVYTYSMTHSKINEILNG
HHHHHHHHHHHHHCCCCCCCEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
NYLEIKDNQLNYNYKKLIENLVDVLNSNEFQEELNTKLQEVYDITQNNIDIDFMKPEAVY
CEEEEECCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCEEE
LGRDFPEEKIKQIKEIVQKEDIMIFKIKQSEDKLFKALI
ECCCCCHHHHHHHHHHHHHCCEEEEEEECCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA