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The map label for this gene is 84489075

Identifier: 84489075

GI number: 84489075

Start: 305464

End: 306342

Strand: Direct

Name: 84489075

Synonym: Msp_0248

Alternate gene names: NA

Gene position: 305464-306342 (Clockwise)

Preceding gene: 84489073

Following gene: 84489077

Centisome position: 17.28

GC content: 28.21

Gene sequence:

>879_bases
ATGGACTTTAATAAAAAATTAAATTTTGAAATCAAGGGGCATGTATTTGATTATAAGTTATTTGAAACTCTTAATTCTAT
TAAAAATAATAAATCTCAAAGACGTGCTGCATCAAGTCTTGGAATATCCCACACAGTTTTAAATAGACGAATATTGTCTG
CTGAAGAAATACTTTCAAAGAAACTTGTCACAGTATCAAATAAGGGATCTGTACTAACAGATTATGCTCTGGATATACTT
GATGAATATGAAACTTATGAAAATCGTTTATTGGATGATGAAGAGGAGATTACAGTTGCAGGAGGAGCAGTTTCATGTGA
ATTTATAAGGCAATTGGCTAGAATTTATCAACTTGAAAATATTAAGTTTCTTGAAACTGATAATAAAACTGCATTGAAAT
TGGCAGATATGGGTTTGGTGGACATAGTTTCATTTGATGATCCTGTACAAGCATATATATATGATTTAGAACCAATACCA
CTTGCAAGAGATTATCTTCTTTTATTATCACATAAACCTCAAGAATTTAATAGTATACATGATTTAAATGGCCTTAATTT
TGTTGAAGTGGAAAATTCTGCACAAAGACTTGCATGGACAACACTAGCAAATTATGATTTAGATTTTGATATAGTGGATG
TTGTATCATCATTTTGTGAGGCAATGCATATTGTTGAAAATCATGAAAACATCTATACATTTATAAATAACAGTATGTCA
TATACATCACAATATACAAGTAACATATTATCTAATGAGACACATCATATAATAAGTGCATTGAATGTTAAAAATAATAG
TTTAATAGATAATTTCCTAAATTTTGCAACACATCATGCAAGAAACTTAAGATTCAATTCTAATTTTGAATTTCTATAA

Upstream 100 bases:

>100_bases
ATCAATAGTTAATTATTTATTATATTAAAATTTATATTTACAATTTACTAAATTATTTTTATATAGTTGTAAAATATTTT
TGTATGTAAGGTGTTGTATT

Downstream 100 bases:

>100_bases
ATATTTTTTTTTATTTAAAACAGGCATATTCAAAGTTAAAAAAAAGTAAAAAAAGTAAGTATTTAATAATTAAATACTTC
TTATTTTGGATTTTAAAGTT

Product: hypothetical protein

Products: NA

Alternate protein names: Transcriptional Regulator LysR Family; Transcriptional Regulator; Transcriptional Regulator Mode Family

Number of amino acids: Translated: 292; Mature: 292

Protein sequence:

>292_residues
MDFNKKLNFEIKGHVFDYKLFETLNSIKNNKSQRRAASSLGISHTVLNRRILSAEEILSKKLVTVSNKGSVLTDYALDIL
DEYETYENRLLDDEEEITVAGGAVSCEFIRQLARIYQLENIKFLETDNKTALKLADMGLVDIVSFDDPVQAYIYDLEPIP
LARDYLLLLSHKPQEFNSIHDLNGLNFVEVENSAQRLAWTTLANYDLDFDIVDVVSSFCEAMHIVENHENIYTFINNSMS
YTSQYTSNILSNETHHIISALNVKNNSLIDNFLNFATHHARNLRFNSNFEFL

Sequences:

>Translated_292_residues
MDFNKKLNFEIKGHVFDYKLFETLNSIKNNKSQRRAASSLGISHTVLNRRILSAEEILSKKLVTVSNKGSVLTDYALDIL
DEYETYENRLLDDEEEITVAGGAVSCEFIRQLARIYQLENIKFLETDNKTALKLADMGLVDIVSFDDPVQAYIYDLEPIP
LARDYLLLLSHKPQEFNSIHDLNGLNFVEVENSAQRLAWTTLANYDLDFDIVDVVSSFCEAMHIVENHENIYTFINNSMS
YTSQYTSNILSNETHHIISALNVKNNSLIDNFLNFATHHARNLRFNSNFEFL
>Mature_292_residues
MDFNKKLNFEIKGHVFDYKLFETLNSIKNNKSQRRAASSLGISHTVLNRRILSAEEILSKKLVTVSNKGSVLTDYALDIL
DEYETYENRLLDDEEEITVAGGAVSCEFIRQLARIYQLENIKFLETDNKTALKLADMGLVDIVSFDDPVQAYIYDLEPIP
LARDYLLLLSHKPQEFNSIHDLNGLNFVEVENSAQRLAWTTLANYDLDFDIVDVVSSFCEAMHIVENHENIYTFINNSMS
YTSQYTSNILSNETHHIISALNVKNNSLIDNFLNFATHHARNLRFNSNFEFL

Specific function: Unknown

COG id: COG0583

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33550; Mature: 33550

Theoretical pI: Translated: 4.71; Mature: 4.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDFNKKLNFEIKGHVFDYKLFETLNSIKNNKSQRRAASSLGISHTVLNRRILSAEEILSK
CCCCCEECEEEECEEEHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
KLVTVSNKGSVLTDYALDILDEYETYENRLLDDEEEITVAGGAVSCEFIRQLARIYQLEN
HHEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHHHHCC
IKFLETDNKTALKLADMGLVDIVSFDDPVQAYIYDLEPIPLARDYLLLLSHKPQEFNSIH
EEEEECCCCCEEEEECCCEEEEECCCCCCEEEEEECCCCCCHHHHHHEECCCCHHHCCHH
DLNGLNFVEVENSAQRLAWTTLANYDLDFDIVDVVSSFCEAMHIVENHENIYTFINNSMS
CCCCCEEEEECCCCHHEEEHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCHH
YTSQYTSNILSNETHHIISALNVKNNSLIDNFLNFATHHARNLRFNSNFEFL
HHHHHHHHHHCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCEECCCCCCC
>Mature Secondary Structure
MDFNKKLNFEIKGHVFDYKLFETLNSIKNNKSQRRAASSLGISHTVLNRRILSAEEILSK
CCCCCEECEEEECEEEHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
KLVTVSNKGSVLTDYALDILDEYETYENRLLDDEEEITVAGGAVSCEFIRQLARIYQLEN
HHEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHHHHCC
IKFLETDNKTALKLADMGLVDIVSFDDPVQAYIYDLEPIPLARDYLLLLSHKPQEFNSIH
EEEEECCCCCEEEEECCCEEEEECCCCCCEEEEEECCCCCCHHHHHHEECCCCHHHCCHH
DLNGLNFVEVENSAQRLAWTTLANYDLDFDIVDVVSSFCEAMHIVENHENIYTFINNSMS
CCCCCEEEEECCCCHHEEEHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCHH
YTSQYTSNILSNETHHIISALNVKNNSLIDNFLNFATHHARNLRFNSNFEFL
HHHHHHHHHHCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA