Definition | Methanosphaera stadtmanae DSM 3091 chromosome, complete genome. |
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Accession | NC_007681 |
Length | 1,767,403 |
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The map label for this gene is 84488996
Identifier: 84488996
GI number: 84488996
Start: 208531
End: 209604
Strand: Direct
Name: 84488996
Synonym: Msp_0167
Alternate gene names: NA
Gene position: 208531-209604 (Clockwise)
Preceding gene: 84488995
Following gene: 84488999
Centisome position: 11.8
GC content: 30.54
Gene sequence:
>1074_bases ATGAATATAGCATTAGTAGCAGAAACAGCTCCAGCAAAAACTTTAATTCCAATTATAGAAAAATTGGATGATGATGAAAT AATATCATTAACACATGATACTGGAGCAATGGAATTATTATCCCCTTACAGTGTGGATATAAAGGCAATTGGTGAAAGCA GAAAGAACACATCTGTAAAAAGAAGTAACTTCACAATTGGAAGATTAGTACTACAAGATACATATAAAACATACAAGGCA TTAAAAAATTCAGATACAGATCTTGTTATAACATGTGGAAATTCAGGGGATGTGAGAAAGGGAATTCTTGCAGCAAAAAA ATTAGATATTCCAGTATTACACATGGAACAAGATATTTATAATCCTATTGAAATGATTGCATATGCTAATTTAATTACTG TTCCAAATAATGTTGCTCAGAAGAATTTAAAGAAAATGTATGGTATAAAAAATACATTTAATATTAGGGGATATCCTCAG GCTGAATATGTCAATAGAATGGAACTTGAATCTAAAGAAGAAATATATGAAAAATATGGTGTTGATGACTTCTATGTATT GTTTTTAGGTGGAGATACACGTGCAACAGACATACCTGATATTATATCAGAGATTCAAAAACTTGATAAAACAATACTAA TAGTTCCATATCGTTTTGATGTAAAATATATTAGTAAATTAATAACAAGACGTAATGTTTATGTGATTGATGGATTTGTT GATCTTCTAAGTTTAATGAAAGCATCACAGGGTGTAATATACTGTGCAGGTATGGGTGTTACAATAGAAGTTGGAGCTCT GTCAATTCCAGCAATTAAATTGTTAGGTTTTCACAGACAACATGCAAGTAATGATTTAGCAAGAAAACTTGGAATAACTG TTGTATCAGAATATGATATTGCCTCATCAATTGATTCAATGAAACAGCCTAATGGAGAACGTCTCGTGAAAAATGGTTAT AAGGCTAGTTTAAAGGTAGCTGAACTTATTCATGAAATGAAAATCTTCACTAAAGATCCTGGTGGACTAAGTTCCATGAA AAAGATTTGGAATCAACGAAAAAAATACAGATAA
Upstream 100 bases:
>100_bases GGATTGAAACAGGACCAACAGATTTAGTAATAATATTGTTCTTTGTAATATCAATAATAATTACAATTTATACAATAACC ATTGAAAAGGAGGGGAATAA
Downstream 100 bases:
>100_bases TTCTTTATTTTTATATTTAATTATTTTTTTTTTTAAAATAAGTTTTTGTCTAATAAAAAATATCAAAAGATGTGTTAATC TTTTGATAAATATGGTGGTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 357; Mature: 357
Protein sequence:
>357_residues MNIALVAETAPAKTLIPIIEKLDDDEIISLTHDTGAMELLSPYSVDIKAIGESRKNTSVKRSNFTIGRLVLQDTYKTYKA LKNSDTDLVITCGNSGDVRKGILAAKKLDIPVLHMEQDIYNPIEMIAYANLITVPNNVAQKNLKKMYGIKNTFNIRGYPQ AEYVNRMELESKEEIYEKYGVDDFYVLFLGGDTRATDIPDIISEIQKLDKTILIVPYRFDVKYISKLITRRNVYVIDGFV DLLSLMKASQGVIYCAGMGVTIEVGALSIPAIKLLGFHRQHASNDLARKLGITVVSEYDIASSIDSMKQPNGERLVKNGY KASLKVAELIHEMKIFTKDPGGLSSMKKIWNQRKKYR
Sequences:
>Translated_357_residues MNIALVAETAPAKTLIPIIEKLDDDEIISLTHDTGAMELLSPYSVDIKAIGESRKNTSVKRSNFTIGRLVLQDTYKTYKA LKNSDTDLVITCGNSGDVRKGILAAKKLDIPVLHMEQDIYNPIEMIAYANLITVPNNVAQKNLKKMYGIKNTFNIRGYPQ AEYVNRMELESKEEIYEKYGVDDFYVLFLGGDTRATDIPDIISEIQKLDKTILIVPYRFDVKYISKLITRRNVYVIDGFV DLLSLMKASQGVIYCAGMGVTIEVGALSIPAIKLLGFHRQHASNDLARKLGITVVSEYDIASSIDSMKQPNGERLVKNGY KASLKVAELIHEMKIFTKDPGGLSSMKKIWNQRKKYR >Mature_357_residues MNIALVAETAPAKTLIPIIEKLDDDEIISLTHDTGAMELLSPYSVDIKAIGESRKNTSVKRSNFTIGRLVLQDTYKTYKA LKNSDTDLVITCGNSGDVRKGILAAKKLDIPVLHMEQDIYNPIEMIAYANLITVPNNVAQKNLKKMYGIKNTFNIRGYPQ AEYVNRMELESKEEIYEKYGVDDFYVLFLGGDTRATDIPDIISEIQKLDKTILIVPYRFDVKYISKLITRRNVYVIDGFV DLLSLMKASQGVIYCAGMGVTIEVGALSIPAIKLLGFHRQHASNDLARKLGITVVSEYDIASSIDSMKQPNGERLVKNGY KASLKVAELIHEMKIFTKDPGGLSSMKKIWNQRKKYR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40083; Mature: 40083
Theoretical pI: Translated: 9.29; Mature: 9.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIALVAETAPAKTLIPIIEKLDDDEIISLTHDTGAMELLSPYSVDIKAIGESRKNTSVK CCEEEEECCCCCHHHHHHHHHCCCCCEEEEECCCCCHHHCCCCCEEEEECCCCCCCCCEE RSNFTIGRLVLQDTYKTYKALKNSDTDLVITCGNSGDVRKGILAAKKLDIPVLHMEQDIY CCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHCCCCEEECCHHHC NPIEMIAYANLITVPNNVAQKNLKKMYGIKNTFNIRGYPQAEYVNRMELESKEEIYEKYG CHHHHHHHHHEEECCCHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHCCHHHHHHHHHC VDDFYVLFLGGDTRATDIPDIISEIQKLDKTILIVPYRFDVKYISKLITRRNVYVIDGFV CCEEEEEEECCCCCCCCHHHHHHHHHHCCCEEEEEEEECCHHHHHHHHHCCCEEEEECHH DLLSLMKASQGVIYCAGMGVTIEVGALSIPAIKLLGFHRQHASNDLARKLGITVVSEYDI HHHHHHHHCCCEEEEECCCEEEEECCCCCCHHHHHHHHHHHCCHHHHHHHCCEEEECCHH ASSIDSMKQPNGERLVKNGYKASLKVAELIHEMKIFTKDPGGLSSMKKIWNQRKKYR HHHHHHHHCCCCCHHHHCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCC >Mature Secondary Structure MNIALVAETAPAKTLIPIIEKLDDDEIISLTHDTGAMELLSPYSVDIKAIGESRKNTSVK CCEEEEECCCCCHHHHHHHHHCCCCCEEEEECCCCCHHHCCCCCEEEEECCCCCCCCCEE RSNFTIGRLVLQDTYKTYKALKNSDTDLVITCGNSGDVRKGILAAKKLDIPVLHMEQDIY CCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHCCCCEEECCHHHC NPIEMIAYANLITVPNNVAQKNLKKMYGIKNTFNIRGYPQAEYVNRMELESKEEIYEKYG CHHHHHHHHHEEECCCHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHCCHHHHHHHHHC VDDFYVLFLGGDTRATDIPDIISEIQKLDKTILIVPYRFDVKYISKLITRRNVYVIDGFV CCEEEEEEECCCCCCCCHHHHHHHHHHCCCEEEEEEEECCHHHHHHHHHCCCEEEEECHH DLLSLMKASQGVIYCAGMGVTIEVGALSIPAIKLLGFHRQHASNDLARKLGITVVSEYDI HHHHHHHHCCCEEEEECCCEEEEECCCCCCHHHHHHHHHHHCCHHHHHHHCCEEEECCHH ASSIDSMKQPNGERLVKNGYKASLKVAELIHEMKIFTKDPGGLSSMKKIWNQRKKYR HHHHHHHHCCCCCHHHHCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA