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The map label for this gene is yafV [C]

Identifier: 83721614

GI number: 83721614

Start: 1451326

End: 1452153

Strand: Reverse

Name: yafV [C]

Synonym: BTH_I1297

Alternate gene names: 83721614

Gene position: 1452153-1451326 (Counterclockwise)

Preceding gene: 83720856

Following gene: 83721404

Centisome position: 38.12

GC content: 71.26

Gene sequence:

>828_bases
ATGACCGATCGCCATGCTTCAGCCTCGCCGTTCCCGGTTGCCGCGCTGCAGATGGTCAGCACGCCCGATCGCGAGCGCAA
TCTCGCCGAAGCCGGCCGGCTGATCGCCGACGCGGCGGATGCGGGCGCGCGGCTCGTGCTGCTGCCCGAGTACTTCTGCT
TCATGGGCCACCAGGACACCGACAAGCTCGCGCTCGCGGAAGCCTACCGGGACGGCCCGATCCAGCGCTTTCTCGCCGAG
CGCGCGAAGGCGCACGGCGTCTGGGTGATCGGCGGCACGCTGCCGCTCTCGGCGCCCGAGCCGTCGCGCGTGCTGAACAC
GACGCTCGTGTTCGATCCGCAAGGCCGCGAGGCCGCCCGCTACGACAAGATCCACCTGTTCAACTTCGAGAAGGGCGACG
AATCGTTCGACGAGGCGCGCACGATCCGTCCGGGCGACGCGGTGCGCACGTTCGACGCGCCGTTCGGCCGGGTCGGGCTG
TCGGTCTGCTACGATCTGCGCTTTCCGGAGCTGTACCGGCGGATGGGCGACTGCGCGATGATCGTCGTGCCGTCGGCGTT
CACGTACACGACGGGCCGCGCGCACTGGGAGACGCTGCTGCGCGCGCGCGCGGTCGAGAACCAGTGCTACGTGCTCGCCG
CCGCGCAAGGCGGCAAGCACGAGAACGGCCGCCGCACGTGGGGCCACAGCATGCTCGTCGACCCGTGGGGCGAAGTCGTC
GCGGTGCGCGACGAAGGCGCGGGCGTCGTCGCGGGCGAAATCGATCCCGCGCGGATCGCCGACGTGCGGCAGAGCCTGCC
CGCGTGGCGGCACCGCGTGCTCGCGTGA

Upstream 100 bases:

>100_bases
TGTCGGCGGCGATCGGGGTAAGATGAACTTCGCGCCCGCGGCCGTCGAGCACTGACGCGGCCGCCGGGCCCGCACCCTTT
TTTCGGCTAACGAATCCGTC

Downstream 100 bases:

>100_bases
GCGCCCCGCCGCCCCGCCCTTGAAGAACGGCCGCTGCGATCCATTTGCCCGGAAAGAAGAAAGCGCGTCCGACAACCGTT
TCAGAATTTGAGAATCCCCG

Product: carbon-nitrogen family hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 275; Mature: 274

Protein sequence:

>275_residues
MTDRHASASPFPVAALQMVSTPDRERNLAEAGRLIADAADAGARLVLLPEYFCFMGHQDTDKLALAEAYRDGPIQRFLAE
RAKAHGVWVIGGTLPLSAPEPSRVLNTTLVFDPQGREAARYDKIHLFNFEKGDESFDEARTIRPGDAVRTFDAPFGRVGL
SVCYDLRFPELYRRMGDCAMIVVPSAFTYTTGRAHWETLLRARAVENQCYVLAAAQGGKHENGRRTWGHSMLVDPWGEVV
AVRDEGAGVVAGEIDPARIADVRQSLPAWRHRVLA

Sequences:

>Translated_275_residues
MTDRHASASPFPVAALQMVSTPDRERNLAEAGRLIADAADAGARLVLLPEYFCFMGHQDTDKLALAEAYRDGPIQRFLAE
RAKAHGVWVIGGTLPLSAPEPSRVLNTTLVFDPQGREAARYDKIHLFNFEKGDESFDEARTIRPGDAVRTFDAPFGRVGL
SVCYDLRFPELYRRMGDCAMIVVPSAFTYTTGRAHWETLLRARAVENQCYVLAAAQGGKHENGRRTWGHSMLVDPWGEVV
AVRDEGAGVVAGEIDPARIADVRQSLPAWRHRVLA
>Mature_274_residues
TDRHASASPFPVAALQMVSTPDRERNLAEAGRLIADAADAGARLVLLPEYFCFMGHQDTDKLALAEAYRDGPIQRFLAER
AKAHGVWVIGGTLPLSAPEPSRVLNTTLVFDPQGREAARYDKIHLFNFEKGDESFDEARTIRPGDAVRTFDAPFGRVGLS
VCYDLRFPELYRRMGDCAMIVVPSAFTYTTGRAHWETLLRARAVENQCYVLAAAQGGKHENGRRTWGHSMLVDPWGEVVA
VRDEGAGVVAGEIDPARIADVRQSLPAWRHRVLA

Specific function: Unknown

COG id: COG0388

COG function: function code R; Predicted amidohydrolase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 CN hydrolase domain [H]

Homologues:

Organism=Homo sapiens, GI9910460, Length=268, Percent_Identity=38.4328358208955, Blast_Score=191, Evalue=5e-49,
Organism=Homo sapiens, GI297632350, Length=275, Percent_Identity=37.8181818181818, Blast_Score=184, Evalue=6e-47,
Organism=Homo sapiens, GI297632348, Length=275, Percent_Identity=37.8181818181818, Blast_Score=184, Evalue=8e-47,
Organism=Homo sapiens, GI5031947, Length=267, Percent_Identity=38.2022471910112, Blast_Score=184, Evalue=8e-47,
Organism=Homo sapiens, GI297632346, Length=192, Percent_Identity=32.2916666666667, Blast_Score=101, Evalue=6e-22,
Organism=Escherichia coli, GI1786412, Length=230, Percent_Identity=29.1304347826087, Blast_Score=82, Evalue=5e-17,
Organism=Caenorhabditis elegans, GI17556280, Length=265, Percent_Identity=41.1320754716981, Blast_Score=199, Evalue=2e-51,
Organism=Saccharomyces cerevisiae, GI6323383, Length=271, Percent_Identity=35.0553505535055, Blast_Score=170, Evalue=3e-43,
Organism=Saccharomyces cerevisiae, GI6322335, Length=296, Percent_Identity=32.0945945945946, Blast_Score=154, Evalue=2e-38,
Organism=Drosophila melanogaster, GI17933642, Length=266, Percent_Identity=37.593984962406, Blast_Score=189, Evalue=1e-48,
Organism=Drosophila melanogaster, GI21355835, Length=268, Percent_Identity=34.3283582089552, Blast_Score=158, Evalue=4e-39,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003010
- InterPro:   IPR001110 [H]

Pfam domain/function: PF00795 CN_hydrolase [H]

EC number: 3.5.-.- [C]

Molecular weight: Translated: 30402; Mature: 30271

Theoretical pI: Translated: 6.72; Mature: 6.72

Prosite motif: PS50263 CN_HYDROLASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDRHASASPFPVAALQMVSTPDRERNLAEAGRLIADAADAGARLVLLPEYFCFMGHQDT
CCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHCCCCCC
DKLALAEAYRDGPIQRFLAERAKAHGVWVIGGTLPLSAPEPSRVLNTTLVFDPQGREAAR
HHHHHHHHHCCCHHHHHHHHHHHHCEEEEEECEEECCCCCCHHHEEEEEEECCCCCCCCC
YDKIHLFNFEKGDESFDEARTIRPGDAVRTFDAPFGRVGLSVCYDLRFPELYRRMGDCAM
CCEEEEEECCCCCCCHHHHHCCCCCCCEEECCCCCHHHHHHHHEECCCHHHHHHHCCEEE
IVVPSAFTYTTGRAHWETLLRARAVENQCYVLAAAQGGKHENGRRTWGHSMLVDPWGEVV
EEECCCEEECCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCEEECCCCCEE
AVRDEGAGVVAGEIDPARIADVRQSLPAWRHRVLA
EEEECCCEEEECCCCHHHHHHHHHHCHHHHHHHCC
>Mature Secondary Structure 
TDRHASASPFPVAALQMVSTPDRERNLAEAGRLIADAADAGARLVLLPEYFCFMGHQDT
CCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHCCCCCC
DKLALAEAYRDGPIQRFLAERAKAHGVWVIGGTLPLSAPEPSRVLNTTLVFDPQGREAAR
HHHHHHHHHCCCHHHHHHHHHHHHCEEEEEECEEECCCCCCHHHEEEEEEECCCCCCCCC
YDKIHLFNFEKGDESFDEARTIRPGDAVRTFDAPFGRVGLSVCYDLRFPELYRRMGDCAM
CCEEEEEECCCCCCCHHHHHCCCCCCCEEECCCCCHHHHHHHHEECCCHHHHHHHCCEEE
IVVPSAFTYTTGRAHWETLLRARAVENQCYVLAAAQGGKHENGRRTWGHSMLVDPWGEVV
EEECCCEEECCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCEEECCCCCEE
AVRDEGAGVVAGEIDPARIADVRQSLPAWRHRVLA
EEEECCCEEEECCCCHHHHHHHHHHCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]