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The map label for this gene is tldD [H]

Identifier: 83721404

GI number: 83721404

Start: 1449722

End: 1451170

Strand: Reverse

Name: tldD [H]

Synonym: BTH_I1296

Alternate gene names: 83721404

Gene position: 1451170-1449722 (Counterclockwise)

Preceding gene: 83721614

Following gene: 83718583

Centisome position: 38.1

GC content: 69.84

Gene sequence:

>1449_bases
GTGCGCAATCTCGCGCTCGCGAAGGACATCCTGCTCACGCCGTACGGCCTCGACGAAGCCCTTCTCACGCGCACGCTCGC
CGACATCTTCACGCATCGCGTCGACTACGCGGACCTGTACTTCCAGGCCACCCGCAGCGAGGCGTGGAGCCTCGAGGAAG
GCATCGTCAAGTCGGGCAGCTTCAGCATCGACCAGGGCGTCGGCGTGCGCGCGGTCGCGGGCGAGCGCACCGCGTTCGCG
TATTCGGACGACCTGTCGCCCGACGCGATCCGCCAGGCGGCCGCCGCGACGAAGGCGATCGCCGCCGCGGGCGGCGGCAA
GCATAAGATCCGAGCCGCTTCGTCGTTGAAGGGCATCTCGGGCCGCGACCTGTACCTGCCCGCCGATCCGCTCGCGTCGC
TCGACGCGACCGCGAAGGTGAAGCTCCTCGAGCGCGTCGAGCAGATGGCGCGCGGCCGCGACCCGCGGATCACGCAGGTC
ATGGCGGGGCTCGCCGGCGAATACGACGTCGTGCTCGTCGCGCGCAGCGACGGCGCGCTCGCGGCGGACATCCGCCCGCT
CGTGCGCGTGTCGGTGACGGTGATCGCCGAGCACAACGGCCGCCGCGAGATCGGCTCGGGCGGCGGCGGCGGCCGCTTCG
ACTACGGCTACTTCACCGACGACGTGCTCGCGCGCTACGTCGACGACGCGGTGCACGCGGCGCTCGTCAACCTCGACGCG
CGTCCCGCGCCGGCGGGCGCGATGACGGTCGTGCTCGGCCCGGGCTGGCCCGGCGTGCTGCTGCACGAGGCGATCGGCCA
CGGGCTCGAGGGCGACTTCAACCGCAAGGGCTCGTCGGCGTTCGCGGGCCGCATCGGCGAGCAGGTCGCCGCGAAGGGCG
TGACCGTCGTCGACGACGGCACGCTGCCGAACCGCCGCGGATCGCTGAACATCGACGACGAAGGCAACCCGACGCAGTGC
ACGACGCTCATCGAGGACGGCATCCTGAAGGGCTACATCCAGGACACGCTGAACGCGCGGCTGATGAAGATGCCCGTCAC
CGGCAACGCGCGGCGCGAATCTTACGCGGCGCTGCCGATGCCGCGGATGACGAACACGTACATGCTCAACGGCGACAAGG
ACCCGCGGGAGATCATCGAATCGGTCAAGCACGGCCTGTACGCAGTGAACTTCGGCGGCGGCCAGGTCGACATCACGAAC
GGCAAGTTCGTGTTCTCGGCGTCCGAGGCGTACATGATCGAGAACGGCAAGGTCACGTATCCGGTCAAGGGCGCGACGCT
GATCGGCAGCGGCCCGGAATCGCTCAAGTACGTGAGCATGATCGGCAACGACATGCGGCTCGACACGGGCGTCGGCGTCT
GCGGCAAGGAGGGGCAGAGCGTGCCCGTCGGGGTCGGCCAGCCGACGCTGCGGCTCGACAACATGACGGTGGGCGGCACC
GCGTCGTAA

Upstream 100 bases:

>100_bases
GAAGAAAGCGCGTCCGACAACCGTTTCAGAATTTGAGAATCCCCGAATCCGCATGAACATCATCGAACCCGGCATCCCCC
AAGGGGACCTCCTTCAGGGC

Downstream 100 bases:

>100_bases
TGCGGCGTTGCCGCATCGCGGCGCAGACAATTCGCGCGAATCGAGTGCATCGCGCGGATTGTCCGCATTTTCAGCGCCGC
AGGATTGCAAGGCGGCCCTC

Product: tldD protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 482; Mature: 482

Protein sequence:

>482_residues
MRNLALAKDILLTPYGLDEALLTRTLADIFTHRVDYADLYFQATRSEAWSLEEGIVKSGSFSIDQGVGVRAVAGERTAFA
YSDDLSPDAIRQAAAATKAIAAAGGGKHKIRAASSLKGISGRDLYLPADPLASLDATAKVKLLERVEQMARGRDPRITQV
MAGLAGEYDVVLVARSDGALAADIRPLVRVSVTVIAEHNGRREIGSGGGGGRFDYGYFTDDVLARYVDDAVHAALVNLDA
RPAPAGAMTVVLGPGWPGVLLHEAIGHGLEGDFNRKGSSAFAGRIGEQVAAKGVTVVDDGTLPNRRGSLNIDDEGNPTQC
TTLIEDGILKGYIQDTLNARLMKMPVTGNARRESYAALPMPRMTNTYMLNGDKDPREIIESVKHGLYAVNFGGGQVDITN
GKFVFSASEAYMIENGKVTYPVKGATLIGSGPESLKYVSMIGNDMRLDTGVGVCGKEGQSVPVGVGQPTLRLDNMTVGGT
AS

Sequences:

>Translated_482_residues
MRNLALAKDILLTPYGLDEALLTRTLADIFTHRVDYADLYFQATRSEAWSLEEGIVKSGSFSIDQGVGVRAVAGERTAFA
YSDDLSPDAIRQAAAATKAIAAAGGGKHKIRAASSLKGISGRDLYLPADPLASLDATAKVKLLERVEQMARGRDPRITQV
MAGLAGEYDVVLVARSDGALAADIRPLVRVSVTVIAEHNGRREIGSGGGGGRFDYGYFTDDVLARYVDDAVHAALVNLDA
RPAPAGAMTVVLGPGWPGVLLHEAIGHGLEGDFNRKGSSAFAGRIGEQVAAKGVTVVDDGTLPNRRGSLNIDDEGNPTQC
TTLIEDGILKGYIQDTLNARLMKMPVTGNARRESYAALPMPRMTNTYMLNGDKDPREIIESVKHGLYAVNFGGGQVDITN
GKFVFSASEAYMIENGKVTYPVKGATLIGSGPESLKYVSMIGNDMRLDTGVGVCGKEGQSVPVGVGQPTLRLDNMTVGGT
AS
>Mature_482_residues
MRNLALAKDILLTPYGLDEALLTRTLADIFTHRVDYADLYFQATRSEAWSLEEGIVKSGSFSIDQGVGVRAVAGERTAFA
YSDDLSPDAIRQAAAATKAIAAAGGGKHKIRAASSLKGISGRDLYLPADPLASLDATAKVKLLERVEQMARGRDPRITQV
MAGLAGEYDVVLVARSDGALAADIRPLVRVSVTVIAEHNGRREIGSGGGGGRFDYGYFTDDVLARYVDDAVHAALVNLDA
RPAPAGAMTVVLGPGWPGVLLHEAIGHGLEGDFNRKGSSAFAGRIGEQVAAKGVTVVDDGTLPNRRGSLNIDDEGNPTQC
TTLIEDGILKGYIQDTLNARLMKMPVTGNARRESYAALPMPRMTNTYMLNGDKDPREIIESVKHGLYAVNFGGGQVDITN
GKFVFSASEAYMIENGKVTYPVKGATLIGSGPESLKYVSMIGNDMRLDTGVGVCGKEGQSVPVGVGQPTLRLDNMTVGGT
AS

Specific function: Suppresses the inhibitory activity of the carbon storage regulator (CsrA) [H]

COG id: COG0312

COG function: function code R; Predicted Zn-dependent proteases and their inactivated homologs

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase U62 family [H]

Homologues:

Organism=Escherichia coli, GI1789640, Length=485, Percent_Identity=59.1752577319588, Blast_Score=551, Evalue=1e-158,
Organism=Escherichia coli, GI1790682, Length=453, Percent_Identity=24.2825607064018, Blast_Score=80, Evalue=4e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002510 [H]

Pfam domain/function: PF01523 PmbA_TldD [H]

EC number: NA

Molecular weight: Translated: 50960; Mature: 50960

Theoretical pI: Translated: 5.97; Mature: 5.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRNLALAKDILLTPYGLDEALLTRTLADIFTHRVDYADLYFQATRSEAWSLEEGIVKSGS
CCCHHHHHHHEECCCCCCHHHHHHHHHHHHHHCCCHHHHEEEECCCHHHCHHHHHHCCCC
FSIDQGVGVRAVAGERTAFAYSDDLSPDAIRQAAAATKAIAAAGGGKHKIRAASSLKGIS
CCCCCCCCEEEECCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEHHHCCCCC
GRDLYLPADPLASLDATAKVKLLERVEQMARGRDPRITQVMAGLAGEYDVVLVARSDGAL
CCEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCEEEEEECCCCCE
AADIRPLVRVSVTVIAEHNGRREIGSGGGGGRFDYGYFTDDVLARYVDDAVHAALVNLDA
ECCCCCEEEEEEEEEEECCCCEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC
RPAPAGAMTVVLGPGWPGVLLHEAIGHGLEGDFNRKGSSAFAGRIGEQVAAKGVTVVDDG
CCCCCCEEEEEECCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEECC
TLPNRRGSLNIDDEGNPTQCTTLIEDGILKGYIQDTLNARLMKMPVTGNARRESYAALPM
CCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCEECCCC
PRMTNTYMLNGDKDPREIIESVKHGLYAVNFGGGQVDITNGKFVFSASEAYMIENGKVTY
CCCCCEEEECCCCCHHHHHHHHHCCEEEEEECCCEEEEECCEEEEECCCEEEEECCEEEE
PVKGATLIGSGPESLKYVSMIGNDMRLDTGVGVCGKEGQSVPVGVGQPTLRLDNMTVGGT
EECCCEEECCCHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCEEECCEECCCC
AS
CC
>Mature Secondary Structure
MRNLALAKDILLTPYGLDEALLTRTLADIFTHRVDYADLYFQATRSEAWSLEEGIVKSGS
CCCHHHHHHHEECCCCCCHHHHHHHHHHHHHHCCCHHHHEEEECCCHHHCHHHHHHCCCC
FSIDQGVGVRAVAGERTAFAYSDDLSPDAIRQAAAATKAIAAAGGGKHKIRAASSLKGIS
CCCCCCCCEEEECCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEHHHCCCCC
GRDLYLPADPLASLDATAKVKLLERVEQMARGRDPRITQVMAGLAGEYDVVLVARSDGAL
CCEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCEEEEEECCCCCE
AADIRPLVRVSVTVIAEHNGRREIGSGGGGGRFDYGYFTDDVLARYVDDAVHAALVNLDA
ECCCCCEEEEEEEEEEECCCCEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC
RPAPAGAMTVVLGPGWPGVLLHEAIGHGLEGDFNRKGSSAFAGRIGEQVAAKGVTVVDDG
CCCCCCEEEEEECCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEECC
TLPNRRGSLNIDDEGNPTQCTTLIEDGILKGYIQDTLNARLMKMPVTGNARRESYAALPM
CCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCEECCCC
PRMTNTYMLNGDKDPREIIESVKHGLYAVNFGGGQVDITNGKFVFSASEAYMIENGKVTY
CCCCCEEEECCCCCHHHHHHHHHCCEEEEEECCCEEEEECCEEEEECCCEEEEECCEEEE
PVKGATLIGSGPESLKYVSMIGNDMRLDTGVGVCGKEGQSVPVGVGQPTLRLDNMTVGGT
EECCCEEECCCHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCEEECCEECCCC
AS
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]