Click here to switch to the map view.

The map label for this gene is ytsP [H]

Identifier: 83721442

GI number: 83721442

Start: 1953635

End: 1954147

Strand: Reverse

Name: ytsP [H]

Synonym: BTH_I1745

Alternate gene names: 83721442

Gene position: 1954147-1953635 (Counterclockwise)

Preceding gene: 83721179

Following gene: 83720506

Centisome position: 51.3

GC content: 67.25

Gene sequence:

>513_bases
ATGTTCGCGCTCTCCGAAGCCCTTCCATCGTCGAAGCCCGCGCTCTACGAAACGCTCGCCGCGCAGGCGCGCGCGCTCGT
CGAGACGGAAACCGACATCGTCGCCAACGCTGCGAATTTCGCATCGCTCGTCTATCACTCGCTCGATGGCCTCAACTGGG
CCGGCTTCTATTTCTTCGACGGCCGCGAGCTCGTCGTCGGGCCGTTCCAGGGCAAGCCCGCATGCGTGCGCATCCCGCTT
GGCAAGGGCGTGTGCGGCACTGCCGCGCAGACGCGCGGCACGCAGGTCGTGCACGACGTGCACGCGTTCGCCGGCCACAT
CGCCTGCGATTCGGCGTCGCGATCGGAAATCGTCGTGCCGCTCATCGCGCGCGACGGCGCGTTGATCGGCGTATGGGATG
TCGACAGCCCGCTGATCGGCCGCTTCGACGCGGAGGATGCGACAGGAATGGAGGCGCTGTGCCGAGTGTTCGTCGAGGTT
GCGTGGGAGAACGCGACGCGGCGCGGCGAGTAA

Upstream 100 bases:

>100_bases
GTCGCCGCGCGCGCTCACGCCCCGCGCGGCGGCGAATTCCCGTAGACTGCCCGAGCCATGGCCGCTCGCGGCCGCCGCTC
AACCCTCACGTCAATCGCTC

Downstream 100 bases:

>100_bases
ATCGGCATCCGGCGATGCCGGCCGCCCGCGCACAAGCGCGGGCGCGGGCGCGGGCGCGGCCACGTTCGCTCGATCGTATT
CCTGCACCAGCGCTGAGGCT

Product: GAF domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 170; Mature: 170

Protein sequence:

>170_residues
MFALSEALPSSKPALYETLAAQARALVETETDIVANAANFASLVYHSLDGLNWAGFYFFDGRELVVGPFQGKPACVRIPL
GKGVCGTAAQTRGTQVVHDVHAFAGHIACDSASRSEIVVPLIARDGALIGVWDVDSPLIGRFDAEDATGMEALCRVFVEV
AWENATRRGE

Sequences:

>Translated_170_residues
MFALSEALPSSKPALYETLAAQARALVETETDIVANAANFASLVYHSLDGLNWAGFYFFDGRELVVGPFQGKPACVRIPL
GKGVCGTAAQTRGTQVVHDVHAFAGHIACDSASRSEIVVPLIARDGALIGVWDVDSPLIGRFDAEDATGMEALCRVFVEV
AWENATRRGE
>Mature_170_residues
MFALSEALPSSKPALYETLAAQARALVETETDIVANAANFASLVYHSLDGLNWAGFYFFDGRELVVGPFQGKPACVRIPL
GKGVCGTAAQTRGTQVVHDVHAFAGHIACDSASRSEIVVPLIARDGALIGVWDVDSPLIGRFDAEDATGMEALCRVFVEV
AWENATRRGE

Specific function: Unknown

COG id: COG1956

COG function: function code T; GAF domain-containing protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the free Met sulfoxide reductase family [H]

Homologues:

Organism=Escherichia coli, GI171474009, Length=143, Percent_Identity=50.3496503496504, Blast_Score=150, Evalue=3e-38,
Organism=Saccharomyces cerevisiae, GI6322781, Length=154, Percent_Identity=43.5064935064935, Blast_Score=130, Evalue=1e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003018
- InterPro:   IPR000614 [H]

Pfam domain/function: PF01590 GAF [H]

EC number: NA

Molecular weight: Translated: 18139; Mature: 18139

Theoretical pI: Translated: 4.64; Mature: 4.64

Prosite motif: PS01320 UPF0067

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFALSEALPSSKPALYETLAAQARALVETETDIVANAANFASLVYHSLDGLNWAGFYFFD
CCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEC
GRELVVGPFQGKPACVRIPLGKGVCGTAAQTRGTQVVHDVHAFAGHIACDSASRSEIVVP
CCEEEEECCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHEEECCCCCCEEEEE
LIARDGALIGVWDVDSPLIGRFDAEDATGMEALCRVFVEVAWENATRRGE
EEECCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MFALSEALPSSKPALYETLAAQARALVETETDIVANAANFASLVYHSLDGLNWAGFYFFD
CCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEC
GRELVVGPFQGKPACVRIPLGKGVCGTAAQTRGTQVVHDVHAFAGHIACDSASRSEIVVP
CCEEEEECCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHEEECCCCCCEEEEE
LIARDGALIGVWDVDSPLIGRFDAEDATGMEALCRVFVEVAWENATRRGE
EEECCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]