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The map label for this gene is aaeR [H]

Identifier: 83721179

GI number: 83721179

Start: 1954312

End: 1955223

Strand: Reverse

Name: aaeR [H]

Synonym: BTH_I1746

Alternate gene names: 83721179

Gene position: 1955223-1954312 (Counterclockwise)

Preceding gene: 83718713

Following gene: 83721442

Centisome position: 51.33

GC content: 71.6

Gene sequence:

>912_bases
ATGCGGGACCTGAACGATCTCTATTACTTCGTGCAAGTGGTCGACCACGGCGGCTTCGCGGCCGCCGGGCGCGCGCTGAA
CATGCCGAAGTCGAAGCTGAGCCGGCGGGTCGCGCTCCTCGAGGAGCGGATCGGCATGCGCCTCATCCAGCGCTCGACGC
GACGCTTCGCAGTCACGGATGTCGGCCAGACCTATTGCGCGCATTGCCGCGCGATGCTCGTCGAGGCGGACGCGGCCGAC
GAAGCGGTCGCGCTGATGCGCGCGGAGCCTCGCGGCATCGTCCGGATGACCTGCCCCGTCGCGCTCCTCGATGCGCTCGT
CGGCGACATGATCGCGGCGTTCATGGCCGAATGCCCGCTCGTCGAGATCCATCTGGAGGAAACGAACCGCCGCGTCGACG
TCGTCGGCGAAGGAATCGACGTCGCGCTGCGCGTTCGGCCGCCGCCGCTCGAAGACAGCGAGCTCGTGCTGCGCGTGCTC
GGCGAGCGCGGACAATGCCTCGTTGCGAGCCCGCGGCTTCTCGCGCGCGCCGGCGCCGGCGTGCCGCGCGTGCCCGCCGA
TCTCGCCGCGCTGCCGAGCCTCGCGCTCGGCCTGCCTCAGGACGAACACGTCTGGAACCTGTACGGGCCCGACGGCGCGC
ATGCGGCGATCCATCATCGGCCCCGGCTCGTCACGCGCGGGATGCTCGCGCTGCGCGCGGCGGCCGTCGCGGGGGTCGGC
GTCGTTCAGTTGCCGACGATGATGGTTCGCGAGCCGATCGCGCGCGGCGAGCTGCGGCAACTGCTGCCCGGCTGGGCCCC
GCGACGCGAGATCGTGCATGCGGTGTTCGCGTCGCGCCGCGGGCTGCTGCCTTCGGTGCGCGCGCTGCTCGACTTTCTCG
CGCAGCGTTTCGCCGCGCTCGAGCCGGATTAG

Upstream 100 bases:

>100_bases
AGCGATCGCTTCGATCGATGGATAGAAGATAAAATCAGAACGATACTTTCGGTAGACTGCACAATTCGTACTCAGCGTTC
CATCTGGAGAACGATCGATC

Downstream 100 bases:

>100_bases
ACGAACGCTCCGGCAGCCGATCGATCAGACGTTCGAACGCGATCCAACGCCCGCTCGCATCCTGGTCGCCGCGCGCGCTC
ACGCCCCGCGCGGCGGCGAA

Product: LysR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 303; Mature: 303

Protein sequence:

>303_residues
MRDLNDLYYFVQVVDHGGFAAAGRALNMPKSKLSRRVALLEERIGMRLIQRSTRRFAVTDVGQTYCAHCRAMLVEADAAD
EAVALMRAEPRGIVRMTCPVALLDALVGDMIAAFMAECPLVEIHLEETNRRVDVVGEGIDVALRVRPPPLEDSELVLRVL
GERGQCLVASPRLLARAGAGVPRVPADLAALPSLALGLPQDEHVWNLYGPDGAHAAIHHRPRLVTRGMLALRAAAVAGVG
VVQLPTMMVREPIARGELRQLLPGWAPRREIVHAVFASRRGLLPSVRALLDFLAQRFAALEPD

Sequences:

>Translated_303_residues
MRDLNDLYYFVQVVDHGGFAAAGRALNMPKSKLSRRVALLEERIGMRLIQRSTRRFAVTDVGQTYCAHCRAMLVEADAAD
EAVALMRAEPRGIVRMTCPVALLDALVGDMIAAFMAECPLVEIHLEETNRRVDVVGEGIDVALRVRPPPLEDSELVLRVL
GERGQCLVASPRLLARAGAGVPRVPADLAALPSLALGLPQDEHVWNLYGPDGAHAAIHHRPRLVTRGMLALRAAAVAGVG
VVQLPTMMVREPIARGELRQLLPGWAPRREIVHAVFASRRGLLPSVRALLDFLAQRFAALEPD
>Mature_303_residues
MRDLNDLYYFVQVVDHGGFAAAGRALNMPKSKLSRRVALLEERIGMRLIQRSTRRFAVTDVGQTYCAHCRAMLVEADAAD
EAVALMRAEPRGIVRMTCPVALLDALVGDMIAAFMAECPLVEIHLEETNRRVDVVGEGIDVALRVRPPPLEDSELVLRVL
GERGQCLVASPRLLARAGAGVPRVPADLAALPSLALGLPQDEHVWNLYGPDGAHAAIHHRPRLVTRGMLALRAAAVAGVG
VVQLPTMMVREPIARGELRQLLPGWAPRREIVHAVFASRRGLLPSVRALLDFLAQRFAALEPD

Specific function: Activates transcription of the aaeXAB operon [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1789639, Length=297, Percent_Identity=29.96632996633, Blast_Score=132, Evalue=2e-32,
Organism=Escherichia coli, GI1786401, Length=291, Percent_Identity=28.5223367697594, Blast_Score=115, Evalue=2e-27,
Organism=Escherichia coli, GI87081978, Length=303, Percent_Identity=30.03300330033, Blast_Score=115, Evalue=4e-27,
Organism=Escherichia coli, GI145693193, Length=307, Percent_Identity=27.3615635179153, Blast_Score=106, Evalue=2e-24,
Organism=Escherichia coli, GI1787128, Length=293, Percent_Identity=22.5255972696246, Blast_Score=86, Evalue=2e-18,
Organism=Escherichia coli, GI1789440, Length=291, Percent_Identity=23.7113402061856, Blast_Score=80, Evalue=1e-16,
Organism=Escherichia coli, GI1787589, Length=311, Percent_Identity=25.4019292604502, Blast_Score=78, Evalue=8e-16,
Organism=Escherichia coli, GI157672245, Length=124, Percent_Identity=29.0322580645161, Blast_Score=65, Evalue=5e-12,
Organism=Escherichia coli, GI1788297, Length=272, Percent_Identity=26.4705882352941, Blast_Score=62, Evalue=6e-11,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000847
- InterPro:   IPR005119
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00126 HTH_1; PF03466 LysR_substrate [H]

EC number: NA

Molecular weight: Translated: 33059; Mature: 33059

Theoretical pI: Translated: 8.51; Mature: 8.51

Prosite motif: PS50931 HTH_LYSR ; PS00228 TUBULIN_B_AUTOREG

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRDLNDLYYFVQVVDHGGFAAAGRALNMPKSKLSRRVALLEERIGMRLIQRSTRRFAVTD
CCCHHHHHHHHHHHHCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEHH
VGQTYCAHCRAMLVEADAADEAVALMRAEPRGIVRMTCPVALLDALVGDMIAAFMAECPL
HHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCE
VEIHLEETNRRVDVVGEGIDVALRVRPPPLEDSELVLRVLGERGQCLVASPRLLARAGAG
EEEEECCCCCEEEEEECCCEEEEEECCCCCCHHHHHHHHHCCCCCEEEECCHHHHHCCCC
VPRVPADLAALPSLALGLPQDEHVWNLYGPDGAHAAIHHRPRLVTRGMLALRAAAVAGVG
CCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHCCCHHHHHHHHHHHHHHHHCCC
VVQLPTMMVREPIARGELRQLLPGWAPRREIVHAVFASRRGLLPSVRALLDFLAQRFAAL
HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCC
EPD
CCC
>Mature Secondary Structure
MRDLNDLYYFVQVVDHGGFAAAGRALNMPKSKLSRRVALLEERIGMRLIQRSTRRFAVTD
CCCHHHHHHHHHHHHCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEHH
VGQTYCAHCRAMLVEADAADEAVALMRAEPRGIVRMTCPVALLDALVGDMIAAFMAECPL
HHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCE
VEIHLEETNRRVDVVGEGIDVALRVRPPPLEDSELVLRVLGERGQCLVASPRLLARAGAG
EEEEECCCCCEEEEEECCCEEEEEECCCCCCHHHHHHHHHCCCCCEEEECCHHHHHCCCC
VPRVPADLAALPSLALGLPQDEHVWNLYGPDGAHAAIHHRPRLVTRGMLALRAAAVAGVG
CCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHCCCHHHHHHHHHHHHHHHHCCC
VVQLPTMMVREPIARGELRQLLPGWAPRREIVHAVFASRRGLLPSVRALLDFLAQRFAAL
HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCC
EPD
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]