Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
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Accession | NC_007651 |
Length | 3,809,201 |
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The map label for this gene is serB [H]
Identifier: 83721426
GI number: 83721426
Start: 2547819
End: 2548664
Strand: Reverse
Name: serB [H]
Synonym: BTH_I2264
Alternate gene names: 83721426
Gene position: 2548664-2547819 (Counterclockwise)
Preceding gene: 83719317
Following gene: 83719596
Centisome position: 66.91
GC content: 67.73
Gene sequence:
>846_bases ATGACCACGAATCTCGTCATTCAAAGCACTGCACCGATCTCCGACGCGCATCACAAGCCGCTCGCCGCGCTCGCGCGCGG CGAGCGCGTCGTTGCGCTCGACGCGCAATCGATCCGCATCGAGGGCGCCGACCCCGCGCAGCGCCCCGACATCGACGCAT ACTGCGGCGCGCACGCGCTCGACTACGCGTTCGTCGACGCGGCCCGCAAGCTTGCCGACTTCGGCCTCGTCGCGATGGAC ATGGATTCGACGCTGATCACGATCGAGTGCATCGACGAGATCGCGGACTTCTGCGGCCTGAAGGCCGAGGTTTCGGCGAT CACCGAGGCGGCGATGCGCGGCGAGATCAAGGACTTCAACGAGAGCCTGACACGTCGTGTCGCGCTGCTCGCGGGCCTCG ACGCGAGCGCGCTCGAGCGCGTCTACGAAGAACGGCTGCGGCTGTCGCCGGGCGCCGAATCGATGCTGGCCGGCGTGAAG GCCGCGGGCCTGAAGACCTTGCTCGTATCGGGCGGCTTCACGTTCTTCACCGAGCGCCTGAAGGCACGGCTCGGCCTCGA CTTCGCCTACTCGAACACGCTCGAGATCGTCGACGGCAAGCTGACGGGCAAGGTCGTCGGCGAAATCGTCAATGCGGACG TGAAGGCGCGCGCGGTGCGCGACACGTGCACGGCGCTCGGCATCGAGCCCGCGCGGGCGATCGTCCTCGGCGACGGGTCG AACGACCTGAAGATGATGGCTGCCGGCGGCTTCTCGATCGCGTTTCGCGCAAAACCGGTCGTGCGCCGCGCGGCGAGCGC CGCGTTCGACCATGTCGGCCTCGACGGATTGCTGCGGCTGTTCTGA
Upstream 100 bases:
>100_bases CTACCGCCCGTCCGCCGGCTCTGCGCCGCGACCGGCTACAATAGCGGGTTCGCCGCGTCGCCGTTGCCGGCGCCGCCATC CGCTCCACCGTGACAATTCC
Downstream 100 bases:
>100_bases GGCCGCTCCGGCTCGCTCGGGAGCGCGGCGCACGCGCGATCGCACCGCCACCGTCTCCCCCCGTCCAACGAAAAACGGCG CTGCGGGCCTGCCGCCCCAG
Product: phosphoserine phosphatase
Products: NA
Alternate protein names: PSP; PSPase; O-phosphoserine phosphohydrolase [H]
Number of amino acids: Translated: 281; Mature: 280
Protein sequence:
>281_residues MTTNLVIQSTAPISDAHHKPLAALARGERVVALDAQSIRIEGADPAQRPDIDAYCGAHALDYAFVDAARKLADFGLVAMD MDSTLITIECIDEIADFCGLKAEVSAITEAAMRGEIKDFNESLTRRVALLAGLDASALERVYEERLRLSPGAESMLAGVK AAGLKTLLVSGGFTFFTERLKARLGLDFAYSNTLEIVDGKLTGKVVGEIVNADVKARAVRDTCTALGIEPARAIVLGDGS NDLKMMAAGGFSIAFRAKPVVRRAASAAFDHVGLDGLLRLF
Sequences:
>Translated_281_residues MTTNLVIQSTAPISDAHHKPLAALARGERVVALDAQSIRIEGADPAQRPDIDAYCGAHALDYAFVDAARKLADFGLVAMD MDSTLITIECIDEIADFCGLKAEVSAITEAAMRGEIKDFNESLTRRVALLAGLDASALERVYEERLRLSPGAESMLAGVK AAGLKTLLVSGGFTFFTERLKARLGLDFAYSNTLEIVDGKLTGKVVGEIVNADVKARAVRDTCTALGIEPARAIVLGDGS NDLKMMAAGGFSIAFRAKPVVRRAASAAFDHVGLDGLLRLF >Mature_280_residues TTNLVIQSTAPISDAHHKPLAALARGERVVALDAQSIRIEGADPAQRPDIDAYCGAHALDYAFVDAARKLADFGLVAMDM DSTLITIECIDEIADFCGLKAEVSAITEAAMRGEIKDFNESLTRRVALLAGLDASALERVYEERLRLSPGAESMLAGVKA AGLKTLLVSGGFTFFTERLKARLGLDFAYSNTLEIVDGKLTGKVVGEIVNADVKARAVRDTCTALGIEPARAIVLGDGSN DLKMMAAGGFSIAFRAKPVVRRAASAAFDHVGLDGLLRLF
Specific function: Unknown
COG id: COG0560
COG function: function code E; Phosphoserine phosphatase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the serB family [H]
Homologues:
Organism=Homo sapiens, GI46249388, Length=110, Percent_Identity=32.7272727272727, Blast_Score=65, Evalue=7e-11, Organism=Escherichia coli, GI1790849, Length=247, Percent_Identity=42.914979757085, Blast_Score=171, Evalue=5e-44, Organism=Saccharomyces cerevisiae, GI6321647, Length=207, Percent_Identity=38.6473429951691, Blast_Score=141, Evalue=1e-34, Organism=Drosophila melanogaster, GI24661601, Length=224, Percent_Identity=27.6785714285714, Blast_Score=70, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR006383 - InterPro: IPR023190 - InterPro: IPR004469 [H]
Pfam domain/function: PF00702 Hydrolase [H]
EC number: =3.1.3.3 [H]
Molecular weight: Translated: 29842; Mature: 29710
Theoretical pI: Translated: 5.21; Mature: 5.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTNLVIQSTAPISDAHHKPLAALARGERVVALDAQSIRIEGADPAQRPDIDAYCGAHAL CCCCEEEECCCCCCCCCCCHHHHHHCCCEEEEEECCEEEEECCCCCCCCCCHHHHCHHHH DYAFVDAARKLADFGLVAMDMDSTLITIECIDEIADFCGLKAEVSAITEAAMRGEIKDFN HHHHHHHHHHHHHCCEEEEECCCCEEEHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHH ESLTRRVALLAGLDASALERVYEERLRLSPGAESMLAGVKAAGLKTLLVSGGFTFFTERL HHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCHHHHHHCCCHHHHHHHH KARLGLDFAYSNTLEIVDGKLTGKVVGEIVNADVKARAVRDTCTALGIEPARAIVLGDGS HHHHCCEEEECCEEEEECCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCEEEEEECCC NDLKMMAAGGFSIAFRAKPVVRRAASAAFDHVGLDGLLRLF CCEEEEEECCEEEEEECCHHHHHHHHHHHHHCCHHHHHHCC >Mature Secondary Structure TTNLVIQSTAPISDAHHKPLAALARGERVVALDAQSIRIEGADPAQRPDIDAYCGAHAL CCCEEEECCCCCCCCCCCHHHHHHCCCEEEEEECCEEEEECCCCCCCCCCHHHHCHHHH DYAFVDAARKLADFGLVAMDMDSTLITIECIDEIADFCGLKAEVSAITEAAMRGEIKDFN HHHHHHHHHHHHHCCEEEEECCCCEEEHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHH ESLTRRVALLAGLDASALERVYEERLRLSPGAESMLAGVKAAGLKTLLVSGGFTFFTERL HHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCHHHHHHCCCHHHHHHHH KARLGLDFAYSNTLEIVDGKLTGKVVGEIVNADVKARAVRDTCTALGIEPARAIVLGDGS HHHHCCEEEECCEEEEECCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCEEEEEECCC NDLKMMAAGGFSIAFRAKPVVRRAASAAFDHVGLDGLLRLF CCEEEEEECCEEEEEECCHHHHHHHHHHHHHCCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]