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The map label for this gene is ybbM [C]

Identifier: 83719317

GI number: 83719317

Start: 2550151

End: 2550969

Strand: Reverse

Name: ybbM [C]

Synonym: BTH_I2266

Alternate gene names: 83719317

Gene position: 2550969-2550151 (Counterclockwise)

Preceding gene: 83718794

Following gene: 83721426

Centisome position: 66.97

GC content: 68.38

Gene sequence:

>819_bases
ATGAACGCGCCGCTGCAGAATCTGAGCCTCGTCGACATCGGAATCGCGGCTGCGCTCGTCGCGATCAACGGCGCGATTTC
TGTCGCGCTGTCGCTCGGCCTCGGCCGCAAGCTCGCATGGGCTGCAGCGCGCACCGTCGTGCAGTTGCTCTCGATCGGCT
ACGTGCTCGGCTGGGTGTTCGGTCATCCGCGCTGGTACGTCGTGCTGCCGCTCGTCGCGCTGATGACGCTGATCGCCGGC
TTCGCGGGCGCCGCGCGCGGCAAGCGAACCTACGCGGGGCAACGCGCCGACAGCATCCTGTCGATCTGGGCGAGCAGTTG
GTTCGTCGCGGCAATCGGGCTGTTCGTCGTGATCCGCATCCATCCGTGGTACGAGCCGCAATATGCGATTCCGATCCTCG
GGATGATTCTCGGCAACACGCTGACGGGGGTGTCGCTCGGCATCGAGCGAATGATGGAGGAGTTGACCGCGCGGCGCGAT
CGCGTCGAGACCGCGCTCGCGCTCGGCGCGACGCGCTGGGAAGCCGCTCAGGACGCGGCGCGGCAGGCGGTGCGCGCCGG
CATGCTGCCGACGCTCAACCAGATGGCCGTCGTCGGCGTCGTGAGCCTGCCCGGGATGATGACGGGCCAGGTGCTCGCTG
GACAGTCGCCGCTGCAAGCCGTCCGCTACCAGATCGTCATCATGTTCCTGATCGCGGCGGCGTCCGCGCTCGGCACCGTC
GGCGCGGTGCTCTCGACTTACCGGCGGCTCTTCTCCGCCGAGCACCGGTTTCTGGCGTCGCGGCTCGTCGAGCGGAAAAA
AGCCGCGAACGGCGGGTGA

Upstream 100 bases:

>100_bases
TGTGGATCTCGCACGATCCGGCGCAAGCGGCGCGCGTCGGCGGCCGGCGCCTGACGATGCGCGCCGGCGTGCTCGGCGAT
GCACCGACGGAGGATGCGCG

Downstream 100 bases:

>100_bases
GAAGCGCGCGCCCGCCGAGAGGCTCCGCTCGTCGGATGCCTGACGGTTCGCCCATTCGAGCGACGATCGAATCGCACATC
GCCATCCGCCATCCGGTCAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 272; Mature: 272

Protein sequence:

>272_residues
MNAPLQNLSLVDIGIAAALVAINGAISVALSLGLGRKLAWAAARTVVQLLSIGYVLGWVFGHPRWYVVLPLVALMTLIAG
FAGAARGKRTYAGQRADSILSIWASSWFVAAIGLFVVIRIHPWYEPQYAIPILGMILGNTLTGVSLGIERMMEELTARRD
RVETALALGATRWEAAQDAARQAVRAGMLPTLNQMAVVGVVSLPGMMTGQVLAGQSPLQAVRYQIVIMFLIAAASALGTV
GAVLSTYRRLFSAEHRFLASRLVERKKAANGG

Sequences:

>Translated_272_residues
MNAPLQNLSLVDIGIAAALVAINGAISVALSLGLGRKLAWAAARTVVQLLSIGYVLGWVFGHPRWYVVLPLVALMTLIAG
FAGAARGKRTYAGQRADSILSIWASSWFVAAIGLFVVIRIHPWYEPQYAIPILGMILGNTLTGVSLGIERMMEELTARRD
RVETALALGATRWEAAQDAARQAVRAGMLPTLNQMAVVGVVSLPGMMTGQVLAGQSPLQAVRYQIVIMFLIAAASALGTV
GAVLSTYRRLFSAEHRFLASRLVERKKAANGG
>Mature_272_residues
MNAPLQNLSLVDIGIAAALVAINGAISVALSLGLGRKLAWAAARTVVQLLSIGYVLGWVFGHPRWYVVLPLVALMTLIAG
FAGAARGKRTYAGQRADSILSIWASSWFVAAIGLFVVIRIHPWYEPQYAIPILGMILGNTLTGVSLGIERMMEELTARRD
RVETALALGATRWEAAQDAARQAVRAGMLPTLNQMAVVGVVSLPGMMTGQVLAGQSPLQAVRYQIVIMFLIAAASALGTV
GAVLSTYRRLFSAEHRFLASRLVERKKAANGG

Specific function: Unknown

COG id: COG0390

COG function: function code R; ABC-type uncharacterized transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0014 family [H]

Homologues:

Organism=Escherichia coli, GI87081746, Length=270, Percent_Identity=28.8888888888889, Blast_Score=136, Evalue=1e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005226 [H]

Pfam domain/function: PF03649 UPF0014 [H]

EC number: NA

Molecular weight: Translated: 29021; Mature: 29021

Theoretical pI: Translated: 11.34; Mature: 11.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MNAPLQNLSLVDIGIAAALVAINGAISVALSLGLGRKLAWAAARTVVQLLSIGYVLGWVF
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
GHPRWYVVLPLVALMTLIAGFAGAARGKRTYAGQRADSILSIWASSWFVAAIGLFVVIRI
CCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
HPWYEPQYAIPILGMILGNTLTGVSLGIERMMEELTARRDRVETALALGATRWEAAQDAA
CCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
RQAVRAGMLPTLNQMAVVGVVSLPGMMTGQVLAGQSPLQAVRYQIVIMFLIAAASALGTV
HHHHHHCCCCCHHHHHHHHHHHCCCHHHCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
GAVLSTYRRLFSAEHRFLASRLVERKKAANGG
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]