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The map label for this gene is acdA [H]

Identifier: 83721338

GI number: 83721338

Start: 1220080

End: 1221276

Strand: Direct

Name: acdA [H]

Synonym: BTH_I1078

Alternate gene names: 83721338

Gene position: 1220080-1221276 (Clockwise)

Preceding gene: 83719166

Following gene: 83720291

Centisome position: 32.03

GC content: 66.33

Gene sequence:

>1197_bases
ATGGATCTCGATTATTCCCCCGCCGACGACGCGTTTCGCGCCGAAGTCCGCGCGTGGCTCGAGGCGAATCTGCCTCGCGC
GCTGCGCGATAAGGTTCTCAACCACAAGCGTTTGAATCGCGACGACTTCGCGAGCTGGCACCGGCTGCTCGGCACGCGAG
GCTGGTCCGCGCCCGCGTGGCCCGTCGAGTACGGCGGGCCCGGCTGGGACGCGACGCAGCGCCACATCTGGGAAGAGGAG
TGCGCGCGGATCGGCGCGCCGCCCGTGCTGCCGTTCGGCGTGTCGATGGTCGCGCCGGTGCTGATGAAGTACGGCAGCGA
AGCGCAAAAGCGCCGTTATCTGCCGCGCATCCTCGACGGCACCGACTGGTGGTGCCAGGGCTACTCGGAGCCCGGCTCGG
GCTCGGACCTCGCTTCGCTGCGCACGCGCGCCGAGCGCCGCGGCGATCATTACGTCGTCAACGGCCAGAAGACCTGGACG
ACGCTCGGCCAGTACGCCGACATGATGTTCTGCCTCGTGCGCACCGATCCCGACGCGAAGAAGCAGGAAGGGATATCGTT
CCTGCTGATCGACATGAAATCGCCGGGCATCACGGTGCGCCCGATCGTCACGCTCGACGAGGATCGCGAAGTCAACGAAG
TGTTCTTCGAGGACGTGAAGGTGCCCGTCGAGAATCTCGTCGGCGACGAAAATCGCGGCTGGACCTACGCGAAGTATCTG
CTCGGGCACGAGCGCACCGGCATTGCTCGGGTCGGCGCATCGAAGCGCGAGCTCGATTTCCTGAAACGCCTCGCGTCGCG
CGAGCACAAGAACGGCAAGCCGCTCATCGCCGATCCCGTGTTCGCCGCGAAGATCGCCGCGCTCGAAGTCGAGCTGATGG
CGCTCGAAGTCACGGTGCTGCGCGTCGTCAGCAGTGAGGCGAGCGGGCGCGGGCCGGGGCCGGAGGCATCGATGCTGAAA
ATCAAGGGCACCGAGATCCAGCAGGCGCTGACCGAGCTGATGGTCGACGCGATCGGGCCGCTCGCCGCGCCGTTCGACGC
GGCCTTCCTGGAGGGCGAGCGCGAGCACAGCGCGGCCGGCGACGACGACGCGGCGCCGCTCGCCGCGCATTACTTCAACT
ACCGCAAGACGTCGATCTACGGCGGTTCGAACGAAATCCAGAAGAACATCATCGCGCAGATGATTCTCGGACTGTAA

Upstream 100 bases:

>100_bases
GCTGCCGGTTCCCGCCGCGCTGAAAGAGCCCCTGCAGTGATCGACCGCTGATCGCTGCGCGGCCCGCAGGCGGCCGGCGC
GGTCAGAGGAGACACTGCGC

Downstream 100 bases:

>100_bases
GGAGCCGCGCCATGAACTTCACCTTCAGCGAAGAACAACAGCAATTCGCCGATGCGCTGCGCCGCTATCTCGATGAGCGC
TACGGCTTCGACGCACGGTG

Product: acyl-CoA dehydrogenase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 398; Mature: 398

Protein sequence:

>398_residues
MDLDYSPADDAFRAEVRAWLEANLPRALRDKVLNHKRLNRDDFASWHRLLGTRGWSAPAWPVEYGGPGWDATQRHIWEEE
CARIGAPPVLPFGVSMVAPVLMKYGSEAQKRRYLPRILDGTDWWCQGYSEPGSGSDLASLRTRAERRGDHYVVNGQKTWT
TLGQYADMMFCLVRTDPDAKKQEGISFLLIDMKSPGITVRPIVTLDEDREVNEVFFEDVKVPVENLVGDENRGWTYAKYL
LGHERTGIARVGASKRELDFLKRLASREHKNGKPLIADPVFAAKIAALEVELMALEVTVLRVVSSEASGRGPGPEASMLK
IKGTEIQQALTELMVDAIGPLAAPFDAAFLEGEREHSAAGDDDAAPLAAHYFNYRKTSIYGGSNEIQKNIIAQMILGL

Sequences:

>Translated_398_residues
MDLDYSPADDAFRAEVRAWLEANLPRALRDKVLNHKRLNRDDFASWHRLLGTRGWSAPAWPVEYGGPGWDATQRHIWEEE
CARIGAPPVLPFGVSMVAPVLMKYGSEAQKRRYLPRILDGTDWWCQGYSEPGSGSDLASLRTRAERRGDHYVVNGQKTWT
TLGQYADMMFCLVRTDPDAKKQEGISFLLIDMKSPGITVRPIVTLDEDREVNEVFFEDVKVPVENLVGDENRGWTYAKYL
LGHERTGIARVGASKRELDFLKRLASREHKNGKPLIADPVFAAKIAALEVELMALEVTVLRVVSSEASGRGPGPEASMLK
IKGTEIQQALTELMVDAIGPLAAPFDAAFLEGEREHSAAGDDDAAPLAAHYFNYRKTSIYGGSNEIQKNIIAQMILGL
>Mature_398_residues
MDLDYSPADDAFRAEVRAWLEANLPRALRDKVLNHKRLNRDDFASWHRLLGTRGWSAPAWPVEYGGPGWDATQRHIWEEE
CARIGAPPVLPFGVSMVAPVLMKYGSEAQKRRYLPRILDGTDWWCQGYSEPGSGSDLASLRTRAERRGDHYVVNGQKTWT
TLGQYADMMFCLVRTDPDAKKQEGISFLLIDMKSPGITVRPIVTLDEDREVNEVFFEDVKVPVENLVGDENRGWTYAKYL
LGHERTGIARVGASKRELDFLKRLASREHKNGKPLIADPVFAAKIAALEVELMALEVTVLRVVSSEASGRGPGPEASMLK
IKGTEIQQALTELMVDAIGPLAAPFDAAFLEGEREHSAAGDDDAAPLAAHYFNYRKTSIYGGSNEIQKNIIAQMILGL

Specific function: Involved in the degradation of long-chain fatty acids [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI4501857, Length=401, Percent_Identity=25.9351620947631, Blast_Score=124, Evalue=2e-28,
Organism=Homo sapiens, GI4557233, Length=359, Percent_Identity=27.8551532033426, Blast_Score=119, Evalue=4e-27,
Organism=Homo sapiens, GI226958412, Length=346, Percent_Identity=27.1676300578035, Blast_Score=119, Evalue=5e-27,
Organism=Homo sapiens, GI226958414, Length=308, Percent_Identity=28.8961038961039, Blast_Score=118, Evalue=9e-27,
Organism=Homo sapiens, GI4501859, Length=340, Percent_Identity=27.0588235294118, Blast_Score=113, Evalue=3e-25,
Organism=Homo sapiens, GI187960098, Length=301, Percent_Identity=27.5747508305648, Blast_Score=110, Evalue=2e-24,
Organism=Homo sapiens, GI4557231, Length=301, Percent_Identity=27.5747508305648, Blast_Score=110, Evalue=2e-24,
Organism=Homo sapiens, GI211971008, Length=308, Percent_Identity=28.2467532467532, Blast_Score=103, Evalue=2e-22,
Organism=Homo sapiens, GI48976061, Length=308, Percent_Identity=28.2467532467532, Blast_Score=103, Evalue=2e-22,
Organism=Homo sapiens, GI21361497, Length=298, Percent_Identity=28.5234899328859, Blast_Score=95, Evalue=1e-19,
Organism=Homo sapiens, GI7656849, Length=219, Percent_Identity=28.7671232876712, Blast_Score=92, Evalue=9e-19,
Organism=Homo sapiens, GI76496475, Length=217, Percent_Identity=32.258064516129, Blast_Score=89, Evalue=7e-18,
Organism=Homo sapiens, GI4557235, Length=217, Percent_Identity=32.258064516129, Blast_Score=89, Evalue=7e-18,
Organism=Homo sapiens, GI38505218, Length=310, Percent_Identity=25.4838709677419, Blast_Score=84, Evalue=2e-16,
Organism=Homo sapiens, GI4503943, Length=398, Percent_Identity=23.3668341708543, Blast_Score=76, Evalue=5e-14,
Organism=Homo sapiens, GI7669494, Length=292, Percent_Identity=26.3698630136986, Blast_Score=75, Evalue=1e-13,
Organism=Escherichia coli, GI87081958, Length=401, Percent_Identity=22.9426433915212, Blast_Score=89, Evalue=5e-19,
Organism=Escherichia coli, GI1786223, Length=330, Percent_Identity=22.7272727272727, Blast_Score=79, Evalue=7e-16,
Organism=Caenorhabditis elegans, GI17538396, Length=335, Percent_Identity=26.2686567164179, Blast_Score=114, Evalue=8e-26,
Organism=Caenorhabditis elegans, GI17508101, Length=370, Percent_Identity=26.7567567567568, Blast_Score=112, Evalue=3e-25,
Organism=Caenorhabditis elegans, GI17570075, Length=421, Percent_Identity=25.41567695962, Blast_Score=107, Evalue=8e-24,
Organism=Caenorhabditis elegans, GI17506239, Length=346, Percent_Identity=26.878612716763, Blast_Score=107, Evalue=2e-23,
Organism=Caenorhabditis elegans, GI17569725, Length=356, Percent_Identity=26.4044943820225, Blast_Score=106, Evalue=3e-23,
Organism=Caenorhabditis elegans, GI17534899, Length=271, Percent_Identity=30.2583025830258, Blast_Score=105, Evalue=4e-23,
Organism=Caenorhabditis elegans, GI17551932, Length=212, Percent_Identity=32.0754716981132, Blast_Score=103, Evalue=2e-22,
Organism=Caenorhabditis elegans, GI71985184, Length=254, Percent_Identity=32.2834645669291, Blast_Score=103, Evalue=2e-22,
Organism=Caenorhabditis elegans, GI71985192, Length=254, Percent_Identity=32.2834645669291, Blast_Score=102, Evalue=5e-22,
Organism=Caenorhabditis elegans, GI32563615, Length=197, Percent_Identity=31.9796954314721, Blast_Score=97, Evalue=2e-20,
Organism=Caenorhabditis elegans, GI17505929, Length=351, Percent_Identity=25.6410256410256, Blast_Score=95, Evalue=6e-20,
Organism=Caenorhabditis elegans, GI71990804, Length=271, Percent_Identity=25.4612546125461, Blast_Score=90, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI17533517, Length=257, Percent_Identity=27.6264591439689, Blast_Score=86, Evalue=5e-17,
Organism=Caenorhabditis elegans, GI17534353, Length=343, Percent_Identity=23.0320699708455, Blast_Score=78, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI71982178, Length=196, Percent_Identity=27.0408163265306, Blast_Score=76, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI17562446, Length=350, Percent_Identity=24.5714285714286, Blast_Score=67, Evalue=2e-11,
Organism=Drosophila melanogaster, GI21356377, Length=390, Percent_Identity=27.6923076923077, Blast_Score=124, Evalue=1e-28,
Organism=Drosophila melanogaster, GI21355753, Length=318, Percent_Identity=28.9308176100629, Blast_Score=111, Evalue=9e-25,
Organism=Drosophila melanogaster, GI281363737, Length=282, Percent_Identity=28.7234042553192, Blast_Score=105, Evalue=4e-23,
Organism=Drosophila melanogaster, GI24666513, Length=347, Percent_Identity=25.9365994236311, Blast_Score=105, Evalue=4e-23,
Organism=Drosophila melanogaster, GI24660351, Length=310, Percent_Identity=27.4193548387097, Blast_Score=102, Evalue=7e-22,
Organism=Drosophila melanogaster, GI24646207, Length=359, Percent_Identity=26.7409470752089, Blast_Score=98, Evalue=9e-21,
Organism=Drosophila melanogaster, GI19920834, Length=400, Percent_Identity=24.75, Blast_Score=81, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 44311; Mature: 44311

Theoretical pI: Translated: 5.71; Mature: 5.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLDYSPADDAFRAEVRAWLEANLPRALRDKVLNHKRLNRDDFASWHRLLGTRGWSAPAW
CCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCC
PVEYGGPGWDATQRHIWEEECARIGAPPVLPFGVSMVAPVLMKYGSEAQKRRYLPRILDG
CCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHCHHHHCC
TDWWCQGYSEPGSGSDLASLRTRAERRGDHYVVNGQKTWTTLGQYADMMFCLVRTDPDAK
CCHHHCCCCCCCCCCHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHEEEEECCCCHH
KQEGISFLLIDMKSPGITVRPIVTLDEDREVNEVFFEDVKVPVENLVGDENRGWTYAKYL
HHCCCEEEEEEECCCCEEEEEEEEECCCCCHHHHHHHHHCCCHHHHCCCCCCCCHHHHHH
LGHERTGIARVGASKRELDFLKRLASREHKNGKPLIADPVFAAKIAALEVELMALEVTVL
HCCCCCCHHHCCCCHHHHHHHHHHHHHCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHH
RVVSSEASGRGPGPEASMLKIKGTEIQQALTELMVDAIGPLAAPFDAAFLEGEREHSAAG
HHHHHCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCHHHCCCC
DDDAAPLAAHYFNYRKTSIYGGSNEIQKNIIAQMILGL
CCCCCHHHHHHHCCHHEEECCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MDLDYSPADDAFRAEVRAWLEANLPRALRDKVLNHKRLNRDDFASWHRLLGTRGWSAPAW
CCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCC
PVEYGGPGWDATQRHIWEEECARIGAPPVLPFGVSMVAPVLMKYGSEAQKRRYLPRILDG
CCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHCHHHHCC
TDWWCQGYSEPGSGSDLASLRTRAERRGDHYVVNGQKTWTTLGQYADMMFCLVRTDPDAK
CCHHHCCCCCCCCCCHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHEEEEECCCCHH
KQEGISFLLIDMKSPGITVRPIVTLDEDREVNEVFFEDVKVPVENLVGDENRGWTYAKYL
HHCCCEEEEEEECCCCEEEEEEEEECCCCCHHHHHHHHHCCCHHHHCCCCCCCCHHHHHH
LGHERTGIARVGASKRELDFLKRLASREHKNGKPLIADPVFAAKIAALEVELMALEVTVL
HCCCCCCHHHCCCCHHHHHHHHHHHHHCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHH
RVVSSEASGRGPGPEASMLKIKGTEIQQALTELMVDAIGPLAAPFDAAFLEGEREHSAAG
HHHHHCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCHHHCCCC
DDDAAPLAAHYFNYRKTSIYGGSNEIQKNIIAQMILGL
CCCCCHHHHHHHCCHHEEECCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9353933; 9384377 [H]