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The map label for this gene is yngJ [H]

Identifier: 83720291

GI number: 83720291

Start: 1221288

End: 1222421

Strand: Direct

Name: yngJ [H]

Synonym: BTH_I1079

Alternate gene names: 83720291

Gene position: 1221288-1222421 (Clockwise)

Preceding gene: 83721338

Following gene: 83719875

Centisome position: 32.06

GC content: 70.81

Gene sequence:

>1134_bases
ATGAACTTCACCTTCAGCGAAGAACAACAGCAATTCGCCGATGCGCTGCGCCGCTATCTCGATGAGCGCTACGGCTTCGA
CGCACGGTGCGCGATCGTCCATTCGGACGCGGGTGTGTCGGCCGACCAGTGGCGCGCGTTCGCCGAGCTGGGCCTGACCG
CGCTGCCCGTGCCGGAAGCGCACGGCGGTTTCGGCGGCGGCGCAGTCGACATGCTCGTCGCGACGCAGGAGCTTGGGCGC
GCGCTCGTCGTCGAGCCTTATTGGGCGACGGCCGTCGGGATCGAGGCGCTGCGTGTCGCGGGTTCGGGCGCCGGCGAGGA
CGCGGCGCTCCTCGAGCGCGCGGCGCAGGGCGACGCGAAGCTCGCGGTCGCGTTCCATGAGCCGCGCGCACGCCACGACC
TGTTCGCGATCGCGACCGTCGCGCGGCCGGTCGGCGACAAATTCGTGCTGACGGGCGTCAAGTCGGTCGTCCGGCACGGC
GCGCAGGCGGACGTGCTGATCGCGCCCGCGCGGCTGCCGAACGGCGCGATCGGCCTCTTCGCGATCGAGCGCGGCGCGGC
AGGCGTCGACATCGTCGACTATCGGACGATCGACGGCCAGCGCGCGGCGACGATCCGCCTGTCGAACACGCCCGCTCGCG
CGCTCGCGGGCGGCGAGCGCGACGCGGCCGCGCTCAAGCGGATCGCCGACTATGGAATCGTGCTGTTGTGCGGCGAAGCG
ATCGGCGCGCTCGACGCGCTCAACCGCGCGACGCTCGACTACACGAAGACGCGCGAACAGTTCGGCATGCCGATCGCGCG
TTTCCAGGCGCTGCAGCACCGGATGGTCGACATGCTGATCCACGCCGAACAGGCGCGCTCGCTCACTTATCTCGCGGCGG
TGCGCTACGCGAGCGGCGACGCGAACGCGCGCCGCAAGGCGGTGTCGGCGGCGAAGGCGCGCGTCGGGCAGGCCGCGCGC
TTCGTCGGTCAGCAGGCGGTGCAGTTGCACGGCGGAATGGGCGTCACGGACGAGGTCGCGGCCGCGCATCTCTTCAAGCG
TCTGTCGATCATCGAAACGACGCTCGGCGACGTCGATCATCACCTCGCGCGTTTCGCGTCGCTGCCGGATTTCGCGGCGC
TGCAGGATGCCTGA

Upstream 100 bases:

>100_bases
ATTACTTCAACTACCGCAAGACGTCGATCTACGGCGGTTCGAACGAAATCCAGAAGAACATCATCGCGCAGATGATTCTC
GGACTGTAAGGAGCCGCGCC

Downstream 100 bases:

>100_bases
GCGGGCGGCGCCCGCCCGTTTCATTTCACGGAGAAGCTCGATGGGTATCAGTTACGAAGACCTGGAAGTCGGCGGTAGAA
CCGAAGTCGGCAAGCATCGA

Product: acyl-CoA dehydrogenase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 377; Mature: 377

Protein sequence:

>377_residues
MNFTFSEEQQQFADALRRYLDERYGFDARCAIVHSDAGVSADQWRAFAELGLTALPVPEAHGGFGGGAVDMLVATQELGR
ALVVEPYWATAVGIEALRVAGSGAGEDAALLERAAQGDAKLAVAFHEPRARHDLFAIATVARPVGDKFVLTGVKSVVRHG
AQADVLIAPARLPNGAIGLFAIERGAAGVDIVDYRTIDGQRAATIRLSNTPARALAGGERDAAALKRIADYGIVLLCGEA
IGALDALNRATLDYTKTREQFGMPIARFQALQHRMVDMLIHAEQARSLTYLAAVRYASGDANARRKAVSAAKARVGQAAR
FVGQQAVQLHGGMGVTDEVAAAHLFKRLSIIETTLGDVDHHLARFASLPDFAALQDA

Sequences:

>Translated_377_residues
MNFTFSEEQQQFADALRRYLDERYGFDARCAIVHSDAGVSADQWRAFAELGLTALPVPEAHGGFGGGAVDMLVATQELGR
ALVVEPYWATAVGIEALRVAGSGAGEDAALLERAAQGDAKLAVAFHEPRARHDLFAIATVARPVGDKFVLTGVKSVVRHG
AQADVLIAPARLPNGAIGLFAIERGAAGVDIVDYRTIDGQRAATIRLSNTPARALAGGERDAAALKRIADYGIVLLCGEA
IGALDALNRATLDYTKTREQFGMPIARFQALQHRMVDMLIHAEQARSLTYLAAVRYASGDANARRKAVSAAKARVGQAAR
FVGQQAVQLHGGMGVTDEVAAAHLFKRLSIIETTLGDVDHHLARFASLPDFAALQDA
>Mature_377_residues
MNFTFSEEQQQFADALRRYLDERYGFDARCAIVHSDAGVSADQWRAFAELGLTALPVPEAHGGFGGGAVDMLVATQELGR
ALVVEPYWATAVGIEALRVAGSGAGEDAALLERAAQGDAKLAVAFHEPRARHDLFAIATVARPVGDKFVLTGVKSVVRHG
AQADVLIAPARLPNGAIGLFAIERGAAGVDIVDYRTIDGQRAATIRLSNTPARALAGGERDAAALKRIADYGIVLLCGEA
IGALDALNRATLDYTKTREQFGMPIARFQALQHRMVDMLIHAEQARSLTYLAAVRYASGDANARRKAVSAAKARVGQAAR
FVGQQAVQLHGGMGVTDEVAAAHLFKRLSIIETTLGDVDHHLARFASLPDFAALQDA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI226958412, Length=367, Percent_Identity=25.0681198910082, Blast_Score=90, Evalue=3e-18,
Organism=Homo sapiens, GI226958414, Length=338, Percent_Identity=25.7396449704142, Blast_Score=85, Evalue=1e-16,
Organism=Homo sapiens, GI4501857, Length=375, Percent_Identity=26.4, Blast_Score=84, Evalue=1e-16,
Organism=Homo sapiens, GI4557233, Length=334, Percent_Identity=26.3473053892216, Blast_Score=80, Evalue=3e-15,
Organism=Homo sapiens, GI4557231, Length=376, Percent_Identity=26.5957446808511, Blast_Score=74, Evalue=3e-13,
Organism=Homo sapiens, GI187960098, Length=376, Percent_Identity=26.5957446808511, Blast_Score=74, Evalue=3e-13,
Organism=Escherichia coli, GI87081958, Length=356, Percent_Identity=21.6292134831461, Blast_Score=69, Evalue=5e-13,
Organism=Caenorhabditis elegans, GI17538396, Length=327, Percent_Identity=25.9938837920489, Blast_Score=95, Evalue=5e-20,
Organism=Caenorhabditis elegans, GI17506239, Length=338, Percent_Identity=27.2189349112426, Blast_Score=90, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI17508101, Length=347, Percent_Identity=26.2247838616715, Blast_Score=79, Evalue=3e-15,
Organism=Caenorhabditis elegans, GI71985184, Length=331, Percent_Identity=25.9818731117825, Blast_Score=74, Evalue=1e-13,
Organism=Drosophila melanogaster, GI21356377, Length=328, Percent_Identity=27.1341463414634, Blast_Score=91, Evalue=2e-18,
Organism=Drosophila melanogaster, GI21355753, Length=328, Percent_Identity=25.9146341463415, Blast_Score=83, Evalue=3e-16,
Organism=Drosophila melanogaster, GI24646207, Length=369, Percent_Identity=25.4742547425474, Blast_Score=79, Evalue=7e-15,
Organism=Drosophila melanogaster, GI24666513, Length=350, Percent_Identity=27.1428571428571, Blast_Score=76, Evalue=4e-14,
Organism=Drosophila melanogaster, GI24660351, Length=378, Percent_Identity=24.8677248677249, Blast_Score=67, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 40089; Mature: 40089

Theoretical pI: Translated: 6.92; Mature: 6.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNFTFSEEQQQFADALRRYLDERYGFDARCAIVHSDAGVSADQWRAFAELGLTALPVPEA
CCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHCCCEECCCCCC
HGGFGGGAVDMLVATQELGRALVVEPYWATAVGIEALRVAGSGAGEDAALLERAAQGDAK
CCCCCCCHHHHHHHHHHHCCEEEECCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCE
LAVAFHEPRARHDLFAIATVARPVGDKFVLTGVKSVVRHGAQADVLIAPARLPNGAIGLF
EEEEECCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCCCCEEEE
AIERGAAGVDIVDYRTIDGQRAATIRLSNTPARALAGGERDAAALKRIADYGIVLLCGEA
EEECCCCCCEEEEEEECCCCCEEEEEECCCCHHHHCCCCHHHHHHHHHHHCCEEEEECHH
IGALDALNRATLDYTKTREQFGMPIARFQALQHRMVDMLIHAEQARSLTYLAAVRYASGD
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
ANARRKAVSAAKARVGQAARFVGQQAVQLHGGMGVTDEVAAAHLFKRLSIIETTLGDVDH
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
HLARFASLPDFAALQDA
HHHHHHCCCCCHHCCCC
>Mature Secondary Structure
MNFTFSEEQQQFADALRRYLDERYGFDARCAIVHSDAGVSADQWRAFAELGLTALPVPEA
CCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHCCCEECCCCCC
HGGFGGGAVDMLVATQELGRALVVEPYWATAVGIEALRVAGSGAGEDAALLERAAQGDAK
CCCCCCCHHHHHHHHHHHCCEEEECCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCE
LAVAFHEPRARHDLFAIATVARPVGDKFVLTGVKSVVRHGAQADVLIAPARLPNGAIGLF
EEEEECCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCCCCEEEE
AIERGAAGVDIVDYRTIDGQRAATIRLSNTPARALAGGERDAAALKRIADYGIVLLCGEA
EEECCCCCCEEEEEEECCCCCEEEEEECCCCHHHHCCCCHHHHHHHHHHHCCEEEEECHH
IGALDALNRATLDYTKTREQFGMPIARFQALQHRMVDMLIHAEQARSLTYLAAVRYASGD
HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
ANARRKAVSAAKARVGQAARFVGQQAVQLHGGMGVTDEVAAAHLFKRLSIIETTLGDVDH
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
HLARFASLPDFAALQDA
HHHHHHCCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9387222; 9384377 [H]