Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
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Accession | NC_007651 |
Length | 3,809,201 |
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The map label for this gene is nagZ [H]
Identifier: 83721329
GI number: 83721329
Start: 1943186
End: 1944214
Strand: Direct
Name: nagZ [H]
Synonym: BTH_I1735
Alternate gene names: 83721329
Gene position: 1943186-1944214 (Clockwise)
Preceding gene: 83718999
Following gene: 83720723
Centisome position: 51.01
GC content: 68.22
Gene sequence:
>1029_bases ATGAAACTGCCCCCCGGTCCGGTGATGCTCGACGTCGTCGGCACGACGCTCACGCGTGACGACGCGCGCCGTCTCGCGCA TCCACAGACGGGCGGCGTGATTCTGTTCGCGCGCCACTTCGAAAGCCGCGCGCAGCTCGTCGCGCTGACCGACGCGATCC GGGCGATCCGCGACGACATCCTGATCGCGGTCGATCACGAGGGCGGCCGGGTGCAGCGCTTTCGCACCGACGGCTTCACC GTGCTGCCGGCGATGCGCCGGCTCGGCGAGCTGTGGGACAAGGATGTGCTGCACGCGACGAAGGCGGCGACCGCGACGGG CTACGTGCTCGCGTCCGAGCTGCGCGCGTGCGGCATCGACATGAGTTTCACGCCCGTGCTCGACCTCGACTACGGCCGCT CGAAGGTGATCGGCGATCGCGCGCTCCATCGCGATCCGCGCGTCGTCGCGCTGCTTGCGAAGAGTCTGAATCACGGGCTT GCGCTTGCCGGGATGTCGAACTGCGGCAAGCATTTTCCCGGTCATGGCTTCGCTGAGGCCGATTCGCACGTCGCGCTGCC GATCGACGATCGCCCGCTCGACGAGATCCTCGCGAACGATGCGGCGCCGTACGACTGGCTCGGGCTGTCGCTGTCGGCCG TCATTCCGGCGCACGTGATTTACACGCAGGTCGATTCGAAGCCGGCGGGCTTCTCGCGCGTATGGCTGCAGGACGTGCTG CGCGGCCGGCTGCGTTTCCCGGGCGCGGTGTTCAGCGACGATCTGTCGATGGAAGCCGCGCGCGAAGGCGGCACGCTCGC GCAGGCGGCGCAGGCCGCGCTCGATGCGGGCTGCGACATGGTGCTTGTGTGCAATCAACCGGATGCGGCGCAGCGGGTGC TCGACGAGCTGCGCACGACGACGTCGCACGAATCGCTGCTGCGGATCAAGCAGATGCGCCCGCGCGGCAAGGCGCTCAAA TGGCGCAAGCTGATGCGTGAGCCGCGCTATCTGAGCGCGCAGGAACTGTTGCGCAGCACGTTCGCTTGA
Upstream 100 bases:
>100_bases TTACGCGGTCACGTTCGTCGTCGCCGAAGCGCCCGACGACGTGGTCGCCGCGCGCTCGGGCGCCGCTTCCTGATCCATTC TCCGCAAGGACGCTGATTCG
Downstream 100 bases:
>100_bases CTTGAAACAGGCGAGGGCGGCGCGCGGCCGCCCCGCTTCGATGTCGGCCGGGCGTCAGCCGATCTTCATTCGCTGCAGCT TGTTGTAGAGCGTCTTCGGG
Product: beta-hexosaminidase
Products: NA
Alternate protein names: Beta-N-acetylhexosaminidase; N-acetyl-beta-glucosaminidase [H]
Number of amino acids: Translated: 342; Mature: 342
Protein sequence:
>342_residues MKLPPGPVMLDVVGTTLTRDDARRLAHPQTGGVILFARHFESRAQLVALTDAIRAIRDDILIAVDHEGGRVQRFRTDGFT VLPAMRRLGELWDKDVLHATKAATATGYVLASELRACGIDMSFTPVLDLDYGRSKVIGDRALHRDPRVVALLAKSLNHGL ALAGMSNCGKHFPGHGFAEADSHVALPIDDRPLDEILANDAAPYDWLGLSLSAVIPAHVIYTQVDSKPAGFSRVWLQDVL RGRLRFPGAVFSDDLSMEAAREGGTLAQAAQAALDAGCDMVLVCNQPDAAQRVLDELRTTTSHESLLRIKQMRPRGKALK WRKLMREPRYLSAQELLRSTFA
Sequences:
>Translated_342_residues MKLPPGPVMLDVVGTTLTRDDARRLAHPQTGGVILFARHFESRAQLVALTDAIRAIRDDILIAVDHEGGRVQRFRTDGFT VLPAMRRLGELWDKDVLHATKAATATGYVLASELRACGIDMSFTPVLDLDYGRSKVIGDRALHRDPRVVALLAKSLNHGL ALAGMSNCGKHFPGHGFAEADSHVALPIDDRPLDEILANDAAPYDWLGLSLSAVIPAHVIYTQVDSKPAGFSRVWLQDVL RGRLRFPGAVFSDDLSMEAAREGGTLAQAAQAALDAGCDMVLVCNQPDAAQRVLDELRTTTSHESLLRIKQMRPRGKALK WRKLMREPRYLSAQELLRSTFA >Mature_342_residues MKLPPGPVMLDVVGTTLTRDDARRLAHPQTGGVILFARHFESRAQLVALTDAIRAIRDDILIAVDHEGGRVQRFRTDGFT VLPAMRRLGELWDKDVLHATKAATATGYVLASELRACGIDMSFTPVLDLDYGRSKVIGDRALHRDPRVVALLAKSLNHGL ALAGMSNCGKHFPGHGFAEADSHVALPIDDRPLDEILANDAAPYDWLGLSLSAVIPAHVIYTQVDSKPAGFSRVWLQDVL RGRLRFPGAVFSDDLSMEAAREGGTLAQAAQAALDAGCDMVLVCNQPDAAQRVLDELRTTTSHESLLRIKQMRPRGKALK WRKLMREPRYLSAQELLRSTFA
Specific function: Cleaves GlcNAc linked beta-1,4 to MurNAc tripeptides [H]
COG id: COG1472
COG function: function code G; Beta-glucosidase-related glycosidases
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 3 family. NagZ subfamily [H]
Homologues:
Organism=Escherichia coli, GI1787350, Length=328, Percent_Identity=45.4268292682927, Blast_Score=250, Evalue=7e-68,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022956 - InterPro: IPR019800 - InterPro: IPR001764 - InterPro: IPR017853 [H]
Pfam domain/function: PF00933 Glyco_hydro_3 [H]
EC number: =3.2.1.52 [H]
Molecular weight: Translated: 37510; Mature: 37510
Theoretical pI: Translated: 8.35; Mature: 8.35
Prosite motif: PS00639 THIOL_PROTEASE_HIS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLPPGPVMLDVVGTTLTRDDARRLAHPQTGGVILFARHFESRAQLVALTDAIRAIRDDI CCCCCCCEEEEECCCHHCHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCE LIAVDHEGGRVQRFRTDGFTVLPAMRRLGELWDKDVLHATKAATATGYVLASELRACGID EEEEECCCCEEEEEECCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC MSFTPVLDLDYGRSKVIGDRALHRDPRVVALLAKSLNHGLALAGMSNCGKHFPGHGFAEA CCCCEEEECCCCCCHHHCCHHHCCCCHHHHHHHHHHCCCEEEECHHHCCCCCCCCCCCCC DSHVALPIDDRPLDEILANDAAPYDWLGLSLSAVIPAHVIYTQVDSKPAGFSRVWLQDVL CCEEEECCCCCCHHHHHCCCCCCCHHHCCHHHHHHHHHHEEEECCCCCCCHHHHHHHHHH RGRLRFPGAVFSDDLSMEAAREGGTLAQAAQAALDAGCDMVLVCNQPDAAQRVLDELRTT HHHHCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHC TSHESLLRIKQMRPRGKALKWRKLMREPRYLSAQELLRSTFA CCHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCHHHHHHHHCC >Mature Secondary Structure MKLPPGPVMLDVVGTTLTRDDARRLAHPQTGGVILFARHFESRAQLVALTDAIRAIRDDI CCCCCCCEEEEECCCHHCHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCE LIAVDHEGGRVQRFRTDGFTVLPAMRRLGELWDKDVLHATKAATATGYVLASELRACGID EEEEECCCCEEEEEECCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC MSFTPVLDLDYGRSKVIGDRALHRDPRVVALLAKSLNHGLALAGMSNCGKHFPGHGFAEA CCCCEEEECCCCCCHHHCCHHHCCCCHHHHHHHHHHCCCEEEECHHHCCCCCCCCCCCCC DSHVALPIDDRPLDEILANDAAPYDWLGLSLSAVIPAHVIYTQVDSKPAGFSRVWLQDVL CCEEEECCCCCCHHHHHCCCCCCCHHHCCHHHHHHHHHHEEEECCCCCCCHHHHHHHHHH RGRLRFPGAVFSDDLSMEAAREGGTLAQAAQAALDAGCDMVLVCNQPDAAQRVLDELRTT HHHHCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHC TSHESLLRIKQMRPRGKALKWRKLMREPRYLSAQELLRSTFA CCHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12910271 [H]