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The map label for this gene is ynfJ [C]

Identifier: 83721209

GI number: 83721209

Start: 2582094

End: 2583980

Strand: Reverse

Name: ynfJ [C]

Synonym: BTH_I2291

Alternate gene names: 83721209

Gene position: 2583980-2582094 (Counterclockwise)

Preceding gene: 83720774

Following gene: 83720332

Centisome position: 67.84

GC content: 69.63

Gene sequence:

>1887_bases
ATGCGATCGTCTATGCGACGCAGCGCTGGCTTGGCTGAACCGCCGCGCGCCTCGTCGCGCCGCCGCGCCGCGTTCGCCGG
GTTTGCCCCGCGCACGCGGCGCGATGCTATTCTTCCGCTCGATTTCATCCGCCGAACCTCGTCCGTCGTGCTCTCGTTCC
TGCTCAAGCTGCGCACTCGCGCACAAACCCTGTTCCGGCTGTCCGACGCGCATACGATGCTCGTGTGGTCGGTGATCGTC
GGCATCGGCGGCGCGCTCGCGACGGTCGCGTTTCGCGAAGGCATCGAGCTGATCCAGCGCGCGATTTCCGGCACGAGCGG
CAGCTTCACCGAAATGGCGAAGCGCCTGCCGTGGCAGGTGCGGTTCTGGCTGCCCGCCGCGGGCGGCTTCCTCGCGGGCT
GCGTGCTGCTCATCGCGCAGCGCGGCGTGCGCAAGGAAAGCAAGACCGACTACATGGAAGCCGTCGCGCTCGGCGACGGC
GTCGTGCCGGTGCGGCAGAGCCTCTGGCGCAGCGCGTCGTCGCTGCTCACGATCGGCAGCGGCGGCTCGATCGGCCGCGA
AGGCCCGATGGTGCAGCTCGCGGCGCTCGCCGCGTCGCTCGTCGGCCGCTTCGCGCACTTCGATCCGCCGCGGCTGCGCC
TGCTCGTCGCGTGCGGCGCGGCGGCGGGGATCACGTCCGCGTACAACGCGCCGATCGCGGGCGCGTTCTTCGTCTGCGAG
ATCGTGCTCGGCTCGATCGCGATGGAGAGCTTCGGGCCCGTCGTCGTCGCGTCGGTCGTCGCGAACATCGTGATGCGCGA
GTTCGCCGGGTACAAGCCGCCGTATCAGATGCCGGTGTTTCCGGCCGTCGCCGGCTGGGAAGTGCTGTTCTTCGTCGCGC
TGGGCCTCTTGTGCGGCGCGGCCGCGCCGCAGTTCCTGCGCCTGCTCGACCTGTCGAAGGCGCAGTTCAGGCGCCTGAAC
GCGCCGCTGCCCGTGCGCCTCGCCGCGGGCGGCCTCGTCGTCGGCGTGATCTCGGTGTGGGTGCCCGACGTCTGGGGCAA
CGGCTACAGCGTCGTCAACGCGATCCTGCACGCGCCGTGGACCTGGCAGGCGCTCGTCGCGGTGCTCGTCTTCAAGCTGA
TCGCGACCGCCGCGACGGCGGGCTCCGGCGCCGTCGGCGGGATCTTCACGCCGACGCTCTTCGTCGGCGCGGTGGTGGGC
TCGCTGTTCGGCATCGCGCTGCACGCGCTGATGCCCGCGCACGTGTCCGCGTGGTACGCGTACGCGATGGTCGGCATGGG
CGCATTCCTCGCGGGCGCGACGCAGGCGCCGCTGATGGCGATCCTGATGATCTTCGAGATGACGCTGAGCTACCAGGTCG
TGCTGCCGCTGATGGTGTCGTGCGTCGTCGCGTACTTCGCGGCGCGCGCGCTCGGCAAGACGTCGATGTACGAGATCACG
CTGCACCGCCACCGCGACGGCGAAGCGCGGATGCGGCTGCGCACCGCGCAGATGCGCGACCTGATCCAGCCGGCCGCGAC
CGTCGTGCCGCTCACGGCGAGCGTCGCCGACATGACGCGCGTGTTTCTCGAATACCCGGTCAAGTACCTGTACGTGACCG
ACGACGCCGGGCGGTTTCGCGGCGCGGTCGCGCTGAAAGACATCACGTCCGATCTGCTCGAAAAGCGCGACACGACGCAC
AAGAGCGCGGCGAACTACCTGCACACGCCGTTTCCGCTGCTCACGCCCGACATGCCGATCAGCACCGCGCTCGAGCACTT
CATGCAGTTCCAGGGCGAGCGCCTGCCCGTCGTCGCGCGCGACGACGATCCGACGCTCGCGGGCGTCGTCTACAAGACGT
CGCTGCTCGACGCATATCGTCGGATGAACATGGATCTCGAACGCTGA

Upstream 100 bases:

>100_bases
GCGCTCGGCATCGAGACGCGGATGTCGCAAATCCGCGCGGCCGGCCCCCGCGCGCTGATGACGGGCCTCATCCTGTACGC
GTGGCTCGTCTTCGGCGGCT

Downstream 100 bases:

>100_bases
GCGATCGCGCGCGAACCGCCAAGGCTCGGACGCCGCCGCACGGGTTCGCCGGTGAATCGAAGCGCGATCGGCCCGGCCGC
GCGATCGGCGGCAGCGCACG

Product: voltage-gated ClC-type chloride channel ClcB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 628; Mature: 628

Protein sequence:

>628_residues
MRSSMRRSAGLAEPPRASSRRRAAFAGFAPRTRRDAILPLDFIRRTSSVVLSFLLKLRTRAQTLFRLSDAHTMLVWSVIV
GIGGALATVAFREGIELIQRAISGTSGSFTEMAKRLPWQVRFWLPAAGGFLAGCVLLIAQRGVRKESKTDYMEAVALGDG
VVPVRQSLWRSASSLLTIGSGGSIGREGPMVQLAALAASLVGRFAHFDPPRLRLLVACGAAAGITSAYNAPIAGAFFVCE
IVLGSIAMESFGPVVVASVVANIVMREFAGYKPPYQMPVFPAVAGWEVLFFVALGLLCGAAAPQFLRLLDLSKAQFRRLN
APLPVRLAAGGLVVGVISVWVPDVWGNGYSVVNAILHAPWTWQALVAVLVFKLIATAATAGSGAVGGIFTPTLFVGAVVG
SLFGIALHALMPAHVSAWYAYAMVGMGAFLAGATQAPLMAILMIFEMTLSYQVVLPLMVSCVVAYFAARALGKTSMYEIT
LHRHRDGEARMRLRTAQMRDLIQPAATVVPLTASVADMTRVFLEYPVKYLYVTDDAGRFRGAVALKDITSDLLEKRDTTH
KSAANYLHTPFPLLTPDMPISTALEHFMQFQGERLPVVARDDDPTLAGVVYKTSLLDAYRRMNMDLER

Sequences:

>Translated_628_residues
MRSSMRRSAGLAEPPRASSRRRAAFAGFAPRTRRDAILPLDFIRRTSSVVLSFLLKLRTRAQTLFRLSDAHTMLVWSVIV
GIGGALATVAFREGIELIQRAISGTSGSFTEMAKRLPWQVRFWLPAAGGFLAGCVLLIAQRGVRKESKTDYMEAVALGDG
VVPVRQSLWRSASSLLTIGSGGSIGREGPMVQLAALAASLVGRFAHFDPPRLRLLVACGAAAGITSAYNAPIAGAFFVCE
IVLGSIAMESFGPVVVASVVANIVMREFAGYKPPYQMPVFPAVAGWEVLFFVALGLLCGAAAPQFLRLLDLSKAQFRRLN
APLPVRLAAGGLVVGVISVWVPDVWGNGYSVVNAILHAPWTWQALVAVLVFKLIATAATAGSGAVGGIFTPTLFVGAVVG
SLFGIALHALMPAHVSAWYAYAMVGMGAFLAGATQAPLMAILMIFEMTLSYQVVLPLMVSCVVAYFAARALGKTSMYEIT
LHRHRDGEARMRLRTAQMRDLIQPAATVVPLTASVADMTRVFLEYPVKYLYVTDDAGRFRGAVALKDITSDLLEKRDTTH
KSAANYLHTPFPLLTPDMPISTALEHFMQFQGERLPVVARDDDPTLAGVVYKTSLLDAYRRMNMDLER
>Mature_628_residues
MRSSMRRSAGLAEPPRASSRRRAAFAGFAPRTRRDAILPLDFIRRTSSVVLSFLLKLRTRAQTLFRLSDAHTMLVWSVIV
GIGGALATVAFREGIELIQRAISGTSGSFTEMAKRLPWQVRFWLPAAGGFLAGCVLLIAQRGVRKESKTDYMEAVALGDG
VVPVRQSLWRSASSLLTIGSGGSIGREGPMVQLAALAASLVGRFAHFDPPRLRLLVACGAAAGITSAYNAPIAGAFFVCE
IVLGSIAMESFGPVVVASVVANIVMREFAGYKPPYQMPVFPAVAGWEVLFFVALGLLCGAAAPQFLRLLDLSKAQFRRLN
APLPVRLAAGGLVVGVISVWVPDVWGNGYSVVNAILHAPWTWQALVAVLVFKLIATAATAGSGAVGGIFTPTLFVGAVVG
SLFGIALHALMPAHVSAWYAYAMVGMGAFLAGATQAPLMAILMIFEMTLSYQVVLPLMVSCVVAYFAARALGKTSMYEIT
LHRHRDGEARMRLRTAQMRDLIQPAATVVPLTASVADMTRVFLEYPVKYLYVTDDAGRFRGAVALKDITSDLLEKRDTTH
KSAANYLHTPFPLLTPDMPISTALEHFMQFQGERLPVVARDDDPTLAGVVYKTSLLDAYRRMNMDLER

Specific function: Unknown

COG id: COG0038

COG function: function code P; Chloride channel protein EriC

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the chloride channel (TC 2.A.49) family. ClcB subfamily [H]

Homologues:

Organism=Homo sapiens, GI55770838, Length=429, Percent_Identity=23.7762237762238, Blast_Score=79, Evalue=2e-14,
Organism=Homo sapiens, GI55770840, Length=428, Percent_Identity=23.3644859813084, Blast_Score=79, Evalue=2e-14,
Organism=Homo sapiens, GI153252026, Length=318, Percent_Identity=25.4716981132075, Blast_Score=72, Evalue=2e-12,
Organism=Homo sapiens, GI189217923, Length=132, Percent_Identity=30.3030303030303, Blast_Score=67, Evalue=6e-11,
Organism=Homo sapiens, GI189217921, Length=132, Percent_Identity=30.3030303030303, Blast_Score=67, Evalue=6e-11,
Organism=Homo sapiens, GI4557473, Length=132, Percent_Identity=30.3030303030303, Blast_Score=66, Evalue=8e-11,
Organism=Escherichia coli, GI87081943, Length=421, Percent_Identity=38.7173396674584, Blast_Score=201, Evalue=1e-52,
Organism=Escherichia coli, GI1786350, Length=325, Percent_Identity=27.3846153846154, Blast_Score=90, Evalue=3e-19,
Organism=Drosophila melanogaster, GI24665008, Length=401, Percent_Identity=22.6932668329177, Blast_Score=80, Evalue=6e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014743
- InterPro:   IPR001807 [H]

Pfam domain/function: PF00654 Voltage_CLC [H]

EC number: NA

Molecular weight: Translated: 67797; Mature: 67797

Theoretical pI: Translated: 10.36; Mature: 10.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSSMRRSAGLAEPPRASSRRRAAFAGFAPRTRRDAILPLDFIRRTSSVVLSFLLKLRTR
CCCCHHHHCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
AQTLFRLSDAHTMLVWSVIVGIGGALATVAFREGIELIQRAISGTSGSFTEMAKRLPWQV
HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCEE
RFWLPAAGGFLAGCVLLIAQRGVRKESKTDYMEAVALGDGVVPVRQSLWRSASSLLTIGS
EEEECCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHEEEECC
GGSIGREGPMVQLAALAASLVGRFAHFDPPRLRLLVACGAAAGITSAYNAPIAGAFFVCE
CCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHEECCCHHCCCHHCCCCCHHHHHHHH
IVLGSIAMESFGPVVVASVVANIVMREFAGYKPPYQMPVFPAVAGWEVLFFVALGLLCGA
HHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHC
AAPQFLRLLDLSKAQFRRLNAPLPVRLAAGGLVVGVISVWVPDVWGNGYSVVNAILHAPW
CHHHHHHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCC
TWQALVAVLVFKLIATAATAGSGAVGGIFTPTLFVGAVVGSLFGIALHALMPAHVSAWYA
HHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YAMVGMGAFLAGATQAPLMAILMIFEMTLSYQVVLPLMVSCVVAYFAARALGKTSMYEIT
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEE
LHRHRDGEARMRLRTAQMRDLIQPAATVVPLTASVADMTRVFLEYPVKYLYVTDDAGRFR
EEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCHHH
GAVALKDITSDLLEKRDTTHKSAANYLHTPFPLLTPDMPISTALEHFMQFQGERLPVVAR
HHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEC
DDDPTLAGVVYKTSLLDAYRRMNMDLER
CCCCCHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MRSSMRRSAGLAEPPRASSRRRAAFAGFAPRTRRDAILPLDFIRRTSSVVLSFLLKLRTR
CCCCHHHHCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
AQTLFRLSDAHTMLVWSVIVGIGGALATVAFREGIELIQRAISGTSGSFTEMAKRLPWQV
HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCEE
RFWLPAAGGFLAGCVLLIAQRGVRKESKTDYMEAVALGDGVVPVRQSLWRSASSLLTIGS
EEEECCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHEEEECC
GGSIGREGPMVQLAALAASLVGRFAHFDPPRLRLLVACGAAAGITSAYNAPIAGAFFVCE
CCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHEECCCHHCCCHHCCCCCHHHHHHHH
IVLGSIAMESFGPVVVASVVANIVMREFAGYKPPYQMPVFPAVAGWEVLFFVALGLLCGA
HHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHC
AAPQFLRLLDLSKAQFRRLNAPLPVRLAAGGLVVGVISVWVPDVWGNGYSVVNAILHAPW
CHHHHHHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCC
TWQALVAVLVFKLIATAATAGSGAVGGIFTPTLFVGAVVGSLFGIALHALMPAHVSAWYA
HHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YAMVGMGAFLAGATQAPLMAILMIFEMTLSYQVVLPLMVSCVVAYFAARALGKTSMYEIT
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEE
LHRHRDGEARMRLRTAQMRDLIQPAATVVPLTASVADMTRVFLEYPVKYLYVTDDAGRFR
EEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCHHH
GAVALKDITSDLLEKRDTTHKSAANYLHTPFPLLTPDMPISTALEHFMQFQGERLPVVAR
HHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEC
DDDPTLAGVVYKTSLLDAYRRMNMDLER
CCCCCHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11823852 [H]