| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
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The map label for this gene is ybcJ [C]
Identifier: 83720446
GI number: 83720446
Start: 1898940
End: 1899161
Strand: Reverse
Name: ybcJ [C]
Synonym: BTH_I1687
Alternate gene names: 83720446
Gene position: 1899161-1898940 (Counterclockwise)
Preceding gene: 83720016
Following gene: 83720398
Centisome position: 49.86
GC content: 65.32
Gene sequence:
>222_bases ATGCCCAATCTCGATTTCACGCTGACCGGCGAATTCGTCGAACTGCATAACCTGCTGAAGCTCACCGGGCTCGCGGACAG CGGCGGCTCGGCAAAGATGATCGTCGCGTCGGGCGCCGTGAAGGTCGACGGCGCGGTCGAGCTGCGCAAGACCTGCAAGA TCCGCGCGGGGCAAGTCGTGTTGCTCGGCGACACGCGCATCGCCGTGCACGGCGCGTCATAG
Upstream 100 bases:
>100_bases ACGCACGCCTTACACCGCGCGCGCCGCACATCGCTTATGATGCGAGGCCCGCCGCGCGCGGCGCTCCCGTTTCCGCGCGC TCGTTTCCGTTTTCATCGCC
Downstream 100 bases:
>100_bases CGAGCCCCTGTCGACCGTGAGGCCATCGGCAACGGCTCATCGACAGCACTCGCGGAAACTCGTAAGCTGATCGTTTCCAA AAAATAAGCAAAGCGCGGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 73; Mature: 72
Protein sequence:
>73_residues MPNLDFTLTGEFVELHNLLKLTGLADSGGSAKMIVASGAVKVDGAVELRKTCKIRAGQVVLLGDTRIAVHGAS
Sequences:
>Translated_73_residues MPNLDFTLTGEFVELHNLLKLTGLADSGGSAKMIVASGAVKVDGAVELRKTCKIRAGQVVLLGDTRIAVHGAS >Mature_72_residues PNLDFTLTGEFVELHNLLKLTGLADSGGSAKMIVASGAVKVDGAVELRKTCKIRAGQVVLLGDTRIAVHGAS
Specific function: Unknown
COG id: COG2501
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87081752, Length=57, Percent_Identity=56.140350877193, Blast_Score=61, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7563; Mature: 7432
Theoretical pI: Translated: 8.54; Mature: 8.54
Prosite motif: PS50889 S4
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPNLDFTLTGEFVELHNLLKLTGLADSGGSAKMIVASGAVKVDGAVELRKTCKIRAGQVV CCCCCEEEECCHHHHHHHEEEECCCCCCCCEEEEEECCCEEECCCEEEEEECCCCCCCEE LLGDTRIAVHGAS EECCCEEEEEECC >Mature Secondary Structure PNLDFTLTGEFVELHNLLKLTGLADSGGSAKMIVASGAVKVDGAVELRKTCKIRAGQVV CCCCEEEECCHHHHHHHEEEECCCCCCCCEEEEEECCCEEECCCEEEEEECCCCCCCEE LLGDTRIAVHGAS EECCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA