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The map label for this gene is araH [H]

Identifier: 83720442

GI number: 83720442

Start: 1327653

End: 1328657

Strand: Direct

Name: araH [H]

Synonym: BTH_I1181

Alternate gene names: 83720442

Gene position: 1327653-1328657 (Clockwise)

Preceding gene: 83720375

Following gene: 83718723

Centisome position: 34.85

GC content: 66.47

Gene sequence:

>1005_bases
ATGCAAGCGAGAGAGAATCTTCCACAAGCCGCGGCGCATGCGGCGGTCGCGCCGGCCGAGGGCCGGCAGCGCTGGCGGCA
GCACGTCGCCGACTACAGTCTCGTCGCGATCTTCGCGGCGATGTTCGTCGCGATGTCGCTGACGGTCGATCATTTCTTCT
CGATCGACAACATGCTCGGGCTCGCGCTGTCGATCTCGCAGATCGGGATGGTCGCGTGCACGATGATGTTCTGCCTCGCG
TCGCGCGATTTCGACCTGTCGATCGGCTCGACGGTCGCGTTCGCCGGCGTGCTGTGCGCGATGGTGCTCAACGCGACCGA
CAACACGTTCGTCGCGATCGCCGCGGCGGTCGCGGCGGGCGCGGTCATCGGCTTCGTCAACGGCGCGGTGATCGCGTATC
TGCGGATCAACGCGCTGATCACGACGCTCGCGATGATGGAGATCGTGCGCGGGCTCGGCTTCATCGTGTCGAAGGGGCAG
GCGGTCGGCGTATCGTCGGAGACGTTCATCGCGCTCGGCGGGCTCACGCTCTTTGGCGTGTCGCTGCCGATCTGGGTGAC
GCTCGCGTGCTTCGTCGTGTTCGGCGTGCTGCTCAACCAGACCGTGTACGGCCGCAACACGCTCGCGATCGGCGGCAATC
CGGAAGCGTCGCGGCTCGCCGGGATCAATGTCGAGCGCACGCGCGTCTACATCTTCCTGATCCAGGGCGCGGTGACCGCG
CTCGCGGGCGTGATCCTCGCGTCGCGGATCACGTCGGGCCAGCCGAACGCCGCACAGGGCTTCGAGCTGAACGTGATCTC
GGCGTGCGTGCTGGGTGGCGTGTCGCTCGCGGGCGGGCGGGCGTCGATCTCGGGCGTCGTGATCGGCGTGCTGATCATGG
GCACCGTCGAGAACGTGATGAACCTGCTCAACATCGATGCGTTCTATCAATATCTGGTGCGCGGCGCGATCCTGCTCGCC
GCCGTGCTGCTCGACCAGTTGAAGAATCGCGGCGCGCGCGATTGA

Upstream 100 bases:

>100_bases
GCGCGACGCGCCGCACGATGACGTTTCGCGAAGCGCGGAACGACGAATTCGACGATTGGAGACGAGGGCGGCCACGCCGC
CCGGCAGAGGAGCAAACGAC

Downstream 100 bases:

>100_bases
GTGCATCGTCCATTTCCGGGAACGAACAGATGAGCGACATTGCCTCGCATCGCGAATCGAACGGCGCGCGCAGCGCGCAA
GACGAGCGTTACGCACGCTA

Product: L-arabinose transporter permease

Products: ADP; phosphate; arabinose [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 334; Mature: 334

Protein sequence:

>334_residues
MQARENLPQAAAHAAVAPAEGRQRWRQHVADYSLVAIFAAMFVAMSLTVDHFFSIDNMLGLALSISQIGMVACTMMFCLA
SRDFDLSIGSTVAFAGVLCAMVLNATDNTFVAIAAAVAAGAVIGFVNGAVIAYLRINALITTLAMMEIVRGLGFIVSKGQ
AVGVSSETFIALGGLTLFGVSLPIWVTLACFVVFGVLLNQTVYGRNTLAIGGNPEASRLAGINVERTRVYIFLIQGAVTA
LAGVILASRITSGQPNAAQGFELNVISACVLGGVSLAGGRASISGVVIGVLIMGTVENVMNLLNIDAFYQYLVRGAILLA
AVLLDQLKNRGARD

Sequences:

>Translated_334_residues
MQARENLPQAAAHAAVAPAEGRQRWRQHVADYSLVAIFAAMFVAMSLTVDHFFSIDNMLGLALSISQIGMVACTMMFCLA
SRDFDLSIGSTVAFAGVLCAMVLNATDNTFVAIAAAVAAGAVIGFVNGAVIAYLRINALITTLAMMEIVRGLGFIVSKGQ
AVGVSSETFIALGGLTLFGVSLPIWVTLACFVVFGVLLNQTVYGRNTLAIGGNPEASRLAGINVERTRVYIFLIQGAVTA
LAGVILASRITSGQPNAAQGFELNVISACVLGGVSLAGGRASISGVVIGVLIMGTVENVMNLLNIDAFYQYLVRGAILLA
AVLLDQLKNRGARD
>Mature_334_residues
MQARENLPQAAAHAAVAPAEGRQRWRQHVADYSLVAIFAAMFVAMSLTVDHFFSIDNMLGLALSISQIGMVACTMMFCLA
SRDFDLSIGSTVAFAGVLCAMVLNATDNTFVAIAAAVAAGAVIGFVNGAVIAYLRINALITTLAMMEIVRGLGFIVSKGQ
AVGVSSETFIALGGLTLFGVSLPIWVTLACFVVFGVLLNQTVYGRNTLAIGGNPEASRLAGINVERTRVYIFLIQGAVTA
LAGVILASRITSGQPNAAQGFELNVISACVLGGVSLAGGRASISGVVIGVLIMGTVENVMNLLNIDAFYQYLVRGAILLA
AVLLDQLKNRGARD

Specific function: Part of the binding-protein-dependent transport system for L-arabinose. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1172

COG function: function code G; Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. AraH/rbsC subfamily [H]

Homologues:

Organism=Escherichia coli, GI145693152, Length=309, Percent_Identity=57.6051779935275, Blast_Score=340, Evalue=5e-95,
Organism=Escherichia coli, GI1790191, Length=301, Percent_Identity=36.5448504983389, Blast_Score=168, Evalue=4e-43,
Organism=Escherichia coli, GI1788896, Length=316, Percent_Identity=31.6455696202532, Blast_Score=162, Evalue=4e-41,
Organism=Escherichia coli, GI1789992, Length=132, Percent_Identity=50, Blast_Score=139, Evalue=3e-34,
Organism=Escherichia coli, GI1790524, Length=307, Percent_Identity=29.6416938110749, Blast_Score=138, Evalue=6e-34,
Organism=Escherichia coli, GI1787793, Length=245, Percent_Identity=33.8775510204082, Blast_Score=118, Evalue=5e-28,
Organism=Escherichia coli, GI1788471, Length=266, Percent_Identity=37.218045112782, Blast_Score=111, Evalue=6e-26,
Organism=Escherichia coli, GI87082395, Length=244, Percent_Identity=29.9180327868852, Blast_Score=98, Evalue=8e-22,
Organism=Escherichia coli, GI1787794, Length=265, Percent_Identity=27.9245283018868, Blast_Score=93, Evalue=2e-20,
Organism=Escherichia coli, GI145693214, Length=229, Percent_Identity=29.6943231441048, Blast_Score=76, Evalue=3e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001851 [H]

Pfam domain/function: PF02653 BPD_transp_2 [H]

EC number: NA

Molecular weight: Translated: 34835; Mature: 34835

Theoretical pI: Translated: 7.86; Mature: 7.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQARENLPQAAAHAAVAPAEGRQRWRQHVADYSLVAIFAAMFVAMSLTVDHFFSIDNMLG
CCCHHCCCHHHHHHHCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LALSISQIGMVACTMMFCLASRDFDLSIGSTVAFAGVLCAMVLNATDNTFVAIAAAVAAG
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
AVIGFVNGAVIAYLRINALITTLAMMEIVRGLGFIVSKGQAVGVSSETFIALGGLTLFGV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCEEEECCHHHHHH
SLPIWVTLACFVVFGVLLNQTVYGRNTLAIGGNPEASRLAGINVERTRVYIFLIQGAVTA
HHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCHHHHCCCCEEHEEEEEEEHHHHHHH
LAGVILASRITSGQPNAAQGFELNVISACVLGGVSLAGGRASISGVVIGVLIMGTVENVM
HHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
NLLNIDAFYQYLVRGAILLAAVLLDQLKNRGARD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MQARENLPQAAAHAAVAPAEGRQRWRQHVADYSLVAIFAAMFVAMSLTVDHFFSIDNMLG
CCCHHCCCHHHHHHHCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LALSISQIGMVACTMMFCLASRDFDLSIGSTVAFAGVLCAMVLNATDNTFVAIAAAVAAG
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
AVIGFVNGAVIAYLRINALITTLAMMEIVRGLGFIVSKGQAVGVSSETFIALGGLTLFGV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCEEEECCHHHHHH
SLPIWVTLACFVVFGVLLNQTVYGRNTLAIGGNPEASRLAGINVERTRVYIFLIQGAVTA
HHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCHHHHCCCCEEHEEEEEEEHHHHHHH
LAGVILASRITSGQPNAAQGFELNVISACVLGGVSLAGGRASISGVVIGVLIMGTVENVM
HHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
NLLNIDAFYQYLVRGAILLAAVLLDQLKNRGARD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; arabinose [Periplasm]; H2O [C]

Specific reaction: ATP + arabinose [Periplasm] + H2O = ADP + phosphate + arabinose [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 2445996; 9097040; 9278503; 8045430 [H]