Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
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Accession | NC_007651 |
Length | 3,809,201 |
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The map label for this gene is wcaL [C]
Identifier: 83720315
GI number: 83720315
Start: 1537528
End: 1538673
Strand: Direct
Name: wcaL [C]
Synonym: BTH_I1359
Alternate gene names: 83720315
Gene position: 1537528-1538673 (Clockwise)
Preceding gene: 83721188
Following gene: 83719323
Centisome position: 40.36
GC content: 66.75
Gene sequence:
>1146_bases ATGACGATCGACGGCGTCGATACGCAACGTCGCGATGCAGCGGCCGACGGCCGTCCGCGAATGAAGATCGTGCAGATCCT CGAATCGAGCGCGACAGGCACCTTGTTGATGGTGTGCCTGATCGCGAACCGCCTCGCGCGAGACGGACACGACGTGCACG TCGTCTATTCGCTTCGGCCCGACACGCCCGCGGATTTTCACGCGTTGTTCGATGCGACTGTCAAGCTGCGCCACATTCAG ATGAAAGGCGTGCCGCTGCTGCCGATGTTGCTCGAGTTGCGACGCACGCTGGTCGGCATCGGGCCGGACATCGTGCATCT GCATTCGTCGTTCGCGGGATTCCTCGGAAGAATCGCGTCGCTTTTCGCGTTGCGCGGCGCCGCGCTTTTCTATAGCCCGC ACTGCATCTCGTTCATGCGCCGCGACATCTCGGCGCTCAAGCGATCGGCGTTCGTCGCGCTCGAACGGATCGCGTGCGTG AAGCGATGCCTCTACATCGCGTGCTCGGCCAGCGAGCGCGAAGCGGTGCGCGCGCACTTGCGGCGACCGGCGGTCGTGAT CGAGAACGCGGTCGGCGCGATGCCCGAGCGCGACGCCGGCGAGCCGGAAGACGCGCGCGGGTCGGTGTTGCGGATCGTGA CGGTCGGCGGCATTCGCGTGCAGAAGAATCCGCAGCTGTTCGCCGAGATCGCGCGCCGCCTGCGCGGCTCGCGCATGCGC TTCACGTGGATCGGCGACGGCGATGCCGCGCTCAAGGCGCAGTTGCGCGACGCGGGCGTCGAGGTTGCAGGCTGGCTCGG CCGCGCCGAAGTCGCCGCGCGATTGCGGCGCATGGACGTGTATTTGTCGACGTCGTCGTGGGAGGGCATGCCCGTGTCGG TCATCGAGGCGATGCTGCTCGGTTTGCCCGTCGTCGCGTCGGCATGCGCGGGAAACGTCGACGTCATACGGCACTTGCAA ACCGGCGCGATATTTCGCGGCGCCGACGACGCGGTCGAACTGCTCGCGTCGATCGACCGCGATGCGGCGCTGCGCGCGCG TCTCGCAACCGCGGCGAGTAAGGAAGCACGCGAACGTTTCGGCGAGGCGCGCTTCTTCCGGCAACTGACGCTGGTCTATG CGTCGCGGCTTGCGCGCGCATCATGA
Upstream 100 bases:
>100_bases ACGATCCCGCGCGGCTGAAGCGCCTGGGATGGACGTCGGTGATCGCGCAATCGGGAGTGCTCGCGCACATCGAGGCGGCA TCCTCGCAGCGAGGTGCGCG
Downstream 100 bases:
>100_bases GGATTCGCCGTCCCGAACGCGAGCTCGCCGCGCGGAATCGGCGCGTTGCGCGCACGGGACGGTTCATTTGGAGATTTGAC CTATGAACGTAGCAATCAGC
Product: glycosyltransferase
Products: NA
Alternate protein names: ORF7 [H]
Number of amino acids: Translated: 381; Mature: 380
Protein sequence:
>381_residues MTIDGVDTQRRDAAADGRPRMKIVQILESSATGTLLMVCLIANRLARDGHDVHVVYSLRPDTPADFHALFDATVKLRHIQ MKGVPLLPMLLELRRTLVGIGPDIVHLHSSFAGFLGRIASLFALRGAALFYSPHCISFMRRDISALKRSAFVALERIACV KRCLYIACSASEREAVRAHLRRPAVVIENAVGAMPERDAGEPEDARGSVLRIVTVGGIRVQKNPQLFAEIARRLRGSRMR FTWIGDGDAALKAQLRDAGVEVAGWLGRAEVAARLRRMDVYLSTSSWEGMPVSVIEAMLLGLPVVASACAGNVDVIRHLQ TGAIFRGADDAVELLASIDRDAALRARLATAASKEARERFGEARFFRQLTLVYASRLARAS
Sequences:
>Translated_381_residues MTIDGVDTQRRDAAADGRPRMKIVQILESSATGTLLMVCLIANRLARDGHDVHVVYSLRPDTPADFHALFDATVKLRHIQ MKGVPLLPMLLELRRTLVGIGPDIVHLHSSFAGFLGRIASLFALRGAALFYSPHCISFMRRDISALKRSAFVALERIACV KRCLYIACSASEREAVRAHLRRPAVVIENAVGAMPERDAGEPEDARGSVLRIVTVGGIRVQKNPQLFAEIARRLRGSRMR FTWIGDGDAALKAQLRDAGVEVAGWLGRAEVAARLRRMDVYLSTSSWEGMPVSVIEAMLLGLPVVASACAGNVDVIRHLQ TGAIFRGADDAVELLASIDRDAALRARLATAASKEARERFGEARFFRQLTLVYASRLARAS >Mature_380_residues TIDGVDTQRRDAAADGRPRMKIVQILESSATGTLLMVCLIANRLARDGHDVHVVYSLRPDTPADFHALFDATVKLRHIQM KGVPLLPMLLELRRTLVGIGPDIVHLHSSFAGFLGRIASLFALRGAALFYSPHCISFMRRDISALKRSAFVALERIACVK RCLYIACSASEREAVRAHLRRPAVVIENAVGAMPERDAGEPEDARGSVLRIVTVGGIRVQKNPQLFAEIARRLRGSRMRF TWIGDGDAALKAQLRDAGVEVAGWLGRAEVAARLRRMDVYLSTSSWEGMPVSVIEAMLLGLPVVASACAGNVDVIRHLQT GAIFRGADDAVELLASIDRDAALRARLATAASKEARERFGEARFFRQLTLVYASRLARAS
Specific function: Slime polysaccharide colanic acid biosynthesis. [C]
COG id: COG0438
COG function: function code M; Glycosyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001296 [H]
Pfam domain/function: PF00534 Glycos_transf_1 [H]
EC number: 2.-.-.- [C]
Molecular weight: Translated: 41699; Mature: 41568
Theoretical pI: Translated: 10.55; Mature: 10.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIDGVDTQRRDAAADGRPRMKIVQILESSATGTLLMVCLIANRLARDGHDVHVVYSLRP CCCCCCCCCCHHCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCEEEEEEECC DTPADFHALFDATVKLRHIQMKGVPLLPMLLELRRTLVGIGPDIVHLHSSFAGFLGRIAS CCCHHHHHHHHHHHHEEEEEECCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH LFALRGAALFYSPHCISFMRRDISALKRSAFVALERIACVKRCLYIACSASEREAVRAHL HHHHHHHHHEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH RRPAVVIENAVGAMPERDAGEPEDARGSVLRIVTVGGIRVQKNPQLFAEIARRLRGSRMR CCCHHEEHHHHCCCCCCCCCCCCCCCCCEEEEEEECCEEEECCHHHHHHHHHHHCCCCEE FTWIGDGDAALKAQLRDAGVEVAGWLGRAEVAARLRRMDVYLSTSSWEGMPVSVIEAMLL EEEECCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCHHHHHHHHH GLPVVASACAGNVDVIRHLQTGAIFRGADDAVELLASIDRDAALRARLATAASKEARERF HHHHHHHHHCCCHHHHHHHHHCCEECCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH GEARFFRQLTLVYASRLARAS HHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TIDGVDTQRRDAAADGRPRMKIVQILESSATGTLLMVCLIANRLARDGHDVHVVYSLRP CCCCCCCCCHHCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCEEEEEEECC DTPADFHALFDATVKLRHIQMKGVPLLPMLLELRRTLVGIGPDIVHLHSSFAGFLGRIAS CCCHHHHHHHHHHHHEEEEEECCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH LFALRGAALFYSPHCISFMRRDISALKRSAFVALERIACVKRCLYIACSASEREAVRAHL HHHHHHHHHEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH RRPAVVIENAVGAMPERDAGEPEDARGSVLRIVTVGGIRVQKNPQLFAEIARRLRGSRMR CCCHHEEHHHHCCCCCCCCCCCCCCCCCEEEEEEECCEEEECCHHHHHHHHHHHCCCCEE FTWIGDGDAALKAQLRDAGVEVAGWLGRAEVAARLRRMDVYLSTSSWEGMPVSVIEAMLL EEEECCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCHHHHHHHHH GLPVVASACAGNVDVIRHLQTGAIFRGADDAVELLASIDRDAALRARLATAASKEARERF HHHHHHHHHCCCHHHHHHHHHCCEECCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH GEARFFRQLTLVYASRLARAS HHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7896702 [H]