Click here to switch to the map view.

The map label for this gene is tnpA [H]

Identifier: 83720227

GI number: 83720227

Start: 1736838

End: 1737563

Strand: Direct

Name: tnpA [H]

Synonym: BTH_I1535

Alternate gene names: 83720227

Gene position: 1736838-1737563 (Clockwise)

Preceding gene: 83720281

Following gene: 83718956

Centisome position: 45.6

GC content: 63.36

Gene sequence:

>726_bases
TTGGAACGGGTGGAGTGGCCGCAAGGAGAAGAGCGCACGCTATCGCTGTATCTGAAGCCGGTCAGCAAGGTCATGTACTG
CGAGCAATGCGGGGCGCGCTGCCAGCAGATCCACGAGACGACCGTTCGTCGAGTGCGCGATCTGCCGCTGTTCGAATACC
GGGTGGTGTTGCATGTGCCTCGTCGCCGGGTCTGGTGTGAGCACTGCGGTGGCCCGCGACTGGAGAAGCTGGCGTGGCTG
GGCCGCTACCAGCGCGTGACGGAGCGGTTCGCCAAGGCCTGCGAGAAGCTGCTACAAGCGGCCAGCGTGCAAGCGGTCGC
AGCCTTCTACGAGTTGGGTTGGCACACGGTGAAATCGATCGACAAGATGCGCTTGCGAGCGCGCGTGGCCGAGCCGGACT
GGTCGACGATCCGCTATCTGGCGATGGACGAGTTCGCGCTCCATAAAGGCCATCGCTACGCCACGGTGGTGGTCGATCCG
ATCGGCCGGCAGGTGCTCTGGGTCGGACCAGGACGCTCACGGGAAACGGCGCGAGCCTTCTTCGAACAACTCCCTGAAGG
CGTGGCCGAGCGTATCGAAGCGGTTGCGATCGACATGACCACGGCCTACGAGTTGGAGATCAAGGAGCAGTGCCCGCAGG
CGGAAATCGTCTTCGACCTGTACCACGTCGTGGCCAAGTACGGGCGCGAAGTGATCGACCGGGTACGGGTGGAATTGACC
CTGTAA

Upstream 100 bases:

>100_bases
AGTGATTGCATAATCTGACACCTGATTCTAAGGATGTCGGAGGAAGCAATTGCTCGATCGAAAGGCACTTCAGGCACTGG
GCTGCTGGACCGGCTACCGG

Downstream 100 bases:

>100_bases
TCCCGGACACAGCTTCACACTAAGGTTGCTGAATCCATCGAGCGCCGGAACTCGCGAGGCGAGCGGTATTTCAGCGCGCT
ATGGGGATGCTTCTCGTTGT

Product: ISBma1, transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 241; Mature: 241

Protein sequence:

>241_residues
MERVEWPQGEERTLSLYLKPVSKVMYCEQCGARCQQIHETTVRRVRDLPLFEYRVVLHVPRRRVWCEHCGGPRLEKLAWL
GRYQRVTERFAKACEKLLQAASVQAVAAFYELGWHTVKSIDKMRLRARVAEPDWSTIRYLAMDEFALHKGHRYATVVVDP
IGRQVLWVGPGRSRETARAFFEQLPEGVAERIEAVAIDMTTAYELEIKEQCPQAEIVFDLYHVVAKYGREVIDRVRVELT
L

Sequences:

>Translated_241_residues
MERVEWPQGEERTLSLYLKPVSKVMYCEQCGARCQQIHETTVRRVRDLPLFEYRVVLHVPRRRVWCEHCGGPRLEKLAWL
GRYQRVTERFAKACEKLLQAASVQAVAAFYELGWHTVKSIDKMRLRARVAEPDWSTIRYLAMDEFALHKGHRYATVVVDP
IGRQVLWVGPGRSRETARAFFEQLPEGVAERIEAVAIDMTTAYELEIKEQCPQAEIVFDLYHVVAKYGREVIDRVRVELT
L
>Mature_241_residues
MERVEWPQGEERTLSLYLKPVSKVMYCEQCGARCQQIHETTVRRVRDLPLFEYRVVLHVPRRRVWCEHCGGPRLEKLAWL
GRYQRVTERFAKACEKLLQAASVQAVAAFYELGWHTVKSIDKMRLRARVAEPDWSTIRYLAMDEFALHKGHRYATVVVDP
IGRQVLWVGPGRSRETARAFFEQLPEGVAERIEAVAIDMTTAYELEIKEQCPQAEIVFDLYHVVAKYGREVIDRVRVELT
L

Specific function: Involved in the transposition of the insertion sequence [H]

COG id: COG3464

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 12 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002560 [H]

Pfam domain/function: PF01610 Transposase_12 [H]

EC number: NA

Molecular weight: Translated: 28118; Mature: 28118

Theoretical pI: Translated: 8.47; Mature: 8.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MERVEWPQGEERTLSLYLKPVSKVMYCEQCGARCQQIHETTVRRVRDLPLFEYRVVLHVP
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHEECCC
RRRVWCEHCGGPRLEKLAWLGRYQRVTERFAKACEKLLQAASVQAVAAFYELGWHTVKSI
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DKMRLRARVAEPDWSTIRYLAMDEFALHKGHRYATVVVDPIGRQVLWVGPGRSRETARAF
HHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCCEEEEECCCCCHHHHHHH
FEQLPEGVAERIEAVAIDMTTAYELEIKEQCPQAEIVFDLYHVVAKYGREVIDRVRVELT
HHHHHHHHHHHHHHHHEEECHHEEEEHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
L
C
>Mature Secondary Structure
MERVEWPQGEERTLSLYLKPVSKVMYCEQCGARCQQIHETTVRRVRDLPLFEYRVVLHVP
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHEECCC
RRRVWCEHCGGPRLEKLAWLGRYQRVTERFAKACEKLLQAASVQAVAAFYELGWHTVKSI
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DKMRLRARVAEPDWSTIRYLAMDEFALHKGHRYATVVVDPIGRQVLWVGPGRSRETARAF
HHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCCEEEEECCCCCHHHHHHH
FEQLPEGVAERIEAVAIDMTTAYELEIKEQCPQAEIVFDLYHVVAKYGREVIDRVRVELT
HHHHHHHHHHHHHHHHEEECHHEEEEHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
L
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8093238 [H]