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The map label for this gene is tnpA [H]

Identifier: 83718956

GI number: 83718956

Start: 1738887

End: 1739348

Strand: Direct

Name: tnpA [H]

Synonym: BTH_I1538

Alternate gene names: 83718956

Gene position: 1738887-1739348 (Clockwise)

Preceding gene: 83720227

Following gene: 83720178

Centisome position: 45.65

GC content: 58.87

Gene sequence:

>462_bases
GTGGATCAGGCCAATCAACTCCGACATGACAAGCCGGCGCGGAAGGTCCTGAAGTCCAGTCGTTGGCTGCTGCTGCGCAA
CCGCCACAATCTGAAGCCGGATCAGGCCGTGCACCTGAAGGAGTTACTGGCCGCCAATCAGTCGCTGTTATGCGTCTACG
TGCTGCGCGACGAACTCAAACGGCTCTGGTTCTACCGAAAGCCAGCCTGGGCGGAAAAGGCCTGGGGGCAATGGTTCGAG
CAGGCTCAGCAAAGCGGGATTGCCGCCCTACAAAAGTTCGCCCAGCGCTTGCAGGGGTACTGGCACGGAATCGTGACTCG
CTGTCGTCATCCGCTCAACACCAGCGTCGTTGAAGGCATCAACAACACCATCAAGGTCATCAAGCGCAGGGCTTATGGGT
ACCGCGACGAGGAGTACTTCTTCCTCAAGATCCGCGCCGCATTCCCCGGAATTCCACGATGA

Upstream 100 bases:

>100_bases
ATCACTTCCTGCCTGGTGTTAGTCAAAAACACAGTCCTATGCCTACCCGTTAGTTTAAGCGGGAGACTGTGTCCGGAGAT
TCAGGGGGCCGTTCCAACGG

Downstream 100 bases:

>100_bases
ACCAAAAATTCGGGATTCGGAAATGCGGCGAGGCGGATCAGTCGGTTGAGCAGAGGTTGGGGGACGCATGCTTTCTCAAA
ATAGACGAGATCGGCTGCGG

Product: ISBma1, transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 153; Mature: 153

Protein sequence:

>153_residues
MDQANQLRHDKPARKVLKSSRWLLLRNRHNLKPDQAVHLKELLAANQSLLCVYVLRDELKRLWFYRKPAWAEKAWGQWFE
QAQQSGIAALQKFAQRLQGYWHGIVTRCRHPLNTSVVEGINNTIKVIKRRAYGYRDEEYFFLKIRAAFPGIPR

Sequences:

>Translated_153_residues
MDQANQLRHDKPARKVLKSSRWLLLRNRHNLKPDQAVHLKELLAANQSLLCVYVLRDELKRLWFYRKPAWAEKAWGQWFE
QAQQSGIAALQKFAQRLQGYWHGIVTRCRHPLNTSVVEGINNTIKVIKRRAYGYRDEEYFFLKIRAAFPGIPR
>Mature_153_residues
MDQANQLRHDKPARKVLKSSRWLLLRNRHNLKPDQAVHLKELLAANQSLLCVYVLRDELKRLWFYRKPAWAEKAWGQWFE
QAQQSGIAALQKFAQRLQGYWHGIVTRCRHPLNTSVVEGINNTIKVIKRRAYGYRDEEYFFLKIRAAFPGIPR

Specific function: Involved in the transposition of the insertion sequence [H]

COG id: COG3464

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 12 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002560 [H]

Pfam domain/function: PF01610 Transposase_12 [H]

EC number: NA

Molecular weight: Translated: 18154; Mature: 18154

Theoretical pI: Translated: 10.98; Mature: 10.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDQANQLRHDKPARKVLKSSRWLLLRNRHNLKPDQAVHLKELLAANQSLLCVYVLRDELK
CCCHHHHCCCCHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHH
RLWFYRKPAWAEKAWGQWFEQAQQSGIAALQKFAQRLQGYWHGIVTRCRHPLNTSVVEGI
HHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
NNTIKVIKRRAYGYRDEEYFFLKIRAAFPGIPR
HHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCC
>Mature Secondary Structure
MDQANQLRHDKPARKVLKSSRWLLLRNRHNLKPDQAVHLKELLAANQSLLCVYVLRDELK
CCCHHHHCCCCHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHH
RLWFYRKPAWAEKAWGQWFEQAQQSGIAALQKFAQRLQGYWHGIVTRCRHPLNTSVVEGI
HHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
NNTIKVIKRRAYGYRDEEYFFLKIRAAFPGIPR
HHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8093238 [H]