Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
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Accession | NC_007651 |
Length | 3,809,201 |
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The map label for this gene is 83719728
Identifier: 83719728
GI number: 83719728
Start: 1649176
End: 1650819
Strand: Direct
Name: 83719728
Synonym: BTH_I1455
Alternate gene names: NA
Gene position: 1649176-1650819 (Clockwise)
Preceding gene: 83719112
Following gene: 83719186
Centisome position: 43.29
GC content: 60.04
Gene sequence:
>1644_bases GTGGCTCTTATTCGCAGGGTGGCAACGACACCGTTCCAGTGGAATAAAGCAACTCCGGAAGATTTCGTCCCGAACGAGTA CGACGTTAGTGAGCTTGCCATACACTTGCCAGCGCTCGACGCCATCTGGCGGCCTGATGGCGTCATCTCAGGTGTGGTTA CGCCGATGCCTCCGGCTTCTCAATGTTCGCTCGAAGTCTGGAACGGTGTGGCCTGTGAACATGAAGCCACTGTTACCGTG GCTGCTGACGGAGATTTTGCGACGGGCTCGCTGCAATCCAGCGATGCGCCAGGCGGCCGGTTGCTCAAGCTCAAGGCTGG ATCCTTCGTAGCCAAGGGCTGGCTGAACGTCGAAACAGAACTGCGGATGTCACCGCGCGACAGGCAGCTCGTACGAGCTG CCGCCCGGGTTTCGGCAGGAATGGCAACGGGCCAGGACCTTTGGGCCATTTACGATGTGCTGCGCGAGGCTATGAGAACG CCGTCCATGGGTGGTTCAACACCGCGCCATTCAACTGTGGCCAAAAATGTCGAGCCGGTCGTTCAAAAAGCGAGCACCAC GACGTACGTTGGGTGGAGCGACATCGATTTTACGCAGATGGGGGCATCCAATCCCCTTGAGATGCAATGTCTGACTGCGG CTTTCAAGCACCTGAATGGAGACCTGGCGCGCGGTGGCGGTCCGAGTGCTGGCCACAAGTCTGCTGAGCTCGTGCTCCTT CGTAACGCGGGTGACGAGTTCGGCGATGACGCTACCGCTCCCGGAACGAACACCACGGAAGGCGCCGATACCCTCGAAGA TGCACAGGCCGCTATGCTCGATGTTCTCCCGGACTCGCTCGCGCGGGACGCGACACATCCGCTCCTGACAGGTGCAGTTA CGCTCGCCGCCAGCGAGGCACTCAAGCGGGCGTTTGCGCGCCGGCGCGGACTTGCGACCAGCGGCAATTCCTTTTTCGCC GGCAGTGACCTCGCATACGGACTGGATTCGTGGCTGACACGATTCAGCGCATTCGACTACGGCGATGGCAATCGTCAGCG ACTGATTTCCGCCTTCTGTACGTTGGCGTGCTGCGCGGTGTACTACGCGAAACCCGCGACCTCCCAGATCGTCTGTGGGA CTGTCAAGGAAGCGGTGCGGGTGCTGGTGGGGTATGTTCCGGATGAAGCAGCGTGGACACAGCGCGTCCAGCTGACACTA CCAACACTGCCGTTTGTCCGTGTGCCGGTGGAAGACCGGGTTGGCGTTGCGCAGACGGCAGCGCTCATCGCGAAGGCGCT GACCACGCGTGAGCAGCTCGAGCAGCTGATTGTGGCGATTTTCACGGACAAGGCGCGGCCCGACCTTCCGGTCGACACGT ACGGGCCCGTAATCCAGCGCCTGGAGGCGTATCGCAAAAAGCCACCCATCGGGAAGAACAAGAGGGTCTTCGGCGTTGTT AAAAGCGCAAACGCACCGTTCGGATGCCCGGGTTGTTTTGTGAATATCAAGGACACGGCCGAACTGGGCGCACTTCGTTC CACGCAGGCACTCGTCCATAACTGTCAACGCGTCATATTCTTGGGACTGGACGTGTCTGCGCTTCGTGCTGCGCTTCCGT CGAATATTGAGTTTGGTGTTGTTCTGCCGGAGAAACGTTCGTGA
Upstream 100 bases:
>100_bases CTGCCTGGTGTTAGTCAAAAACACAGTCCTATGCCTACCCGTTAGTTTAAGCGGGAGACTGTGTCCGGAGATTCAGGGGG CCGTTCCAGACAACGTTGAG
Downstream 100 bases:
>100_bases TTACTGCACCTTCATTTACCGCTCCGGCTCCGACGTCGCTCGCACCAGACCCTCTCGGCACACAGAGCGTCAACATGGCG CTCTATCGTTCGGTGTTCCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 547; Mature: 546
Protein sequence:
>547_residues MALIRRVATTPFQWNKATPEDFVPNEYDVSELAIHLPALDAIWRPDGVISGVVTPMPPASQCSLEVWNGVACEHEATVTV AADGDFATGSLQSSDAPGGRLLKLKAGSFVAKGWLNVETELRMSPRDRQLVRAAARVSAGMATGQDLWAIYDVLREAMRT PSMGGSTPRHSTVAKNVEPVVQKASTTTYVGWSDIDFTQMGASNPLEMQCLTAAFKHLNGDLARGGGPSAGHKSAELVLL RNAGDEFGDDATAPGTNTTEGADTLEDAQAAMLDVLPDSLARDATHPLLTGAVTLAASEALKRAFARRRGLATSGNSFFA GSDLAYGLDSWLTRFSAFDYGDGNRQRLISAFCTLACCAVYYAKPATSQIVCGTVKEAVRVLVGYVPDEAAWTQRVQLTL PTLPFVRVPVEDRVGVAQTAALIAKALTTREQLEQLIVAIFTDKARPDLPVDTYGPVIQRLEAYRKKPPIGKNKRVFGVV KSANAPFGCPGCFVNIKDTAELGALRSTQALVHNCQRVIFLGLDVSALRAALPSNIEFGVVLPEKRS
Sequences:
>Translated_547_residues MALIRRVATTPFQWNKATPEDFVPNEYDVSELAIHLPALDAIWRPDGVISGVVTPMPPASQCSLEVWNGVACEHEATVTV AADGDFATGSLQSSDAPGGRLLKLKAGSFVAKGWLNVETELRMSPRDRQLVRAAARVSAGMATGQDLWAIYDVLREAMRT PSMGGSTPRHSTVAKNVEPVVQKASTTTYVGWSDIDFTQMGASNPLEMQCLTAAFKHLNGDLARGGGPSAGHKSAELVLL RNAGDEFGDDATAPGTNTTEGADTLEDAQAAMLDVLPDSLARDATHPLLTGAVTLAASEALKRAFARRRGLATSGNSFFA GSDLAYGLDSWLTRFSAFDYGDGNRQRLISAFCTLACCAVYYAKPATSQIVCGTVKEAVRVLVGYVPDEAAWTQRVQLTL PTLPFVRVPVEDRVGVAQTAALIAKALTTREQLEQLIVAIFTDKARPDLPVDTYGPVIQRLEAYRKKPPIGKNKRVFGVV KSANAPFGCPGCFVNIKDTAELGALRSTQALVHNCQRVIFLGLDVSALRAALPSNIEFGVVLPEKRS >Mature_546_residues ALIRRVATTPFQWNKATPEDFVPNEYDVSELAIHLPALDAIWRPDGVISGVVTPMPPASQCSLEVWNGVACEHEATVTVA ADGDFATGSLQSSDAPGGRLLKLKAGSFVAKGWLNVETELRMSPRDRQLVRAAARVSAGMATGQDLWAIYDVLREAMRTP SMGGSTPRHSTVAKNVEPVVQKASTTTYVGWSDIDFTQMGASNPLEMQCLTAAFKHLNGDLARGGGPSAGHKSAELVLLR NAGDEFGDDATAPGTNTTEGADTLEDAQAAMLDVLPDSLARDATHPLLTGAVTLAASEALKRAFARRRGLATSGNSFFAG SDLAYGLDSWLTRFSAFDYGDGNRQRLISAFCTLACCAVYYAKPATSQIVCGTVKEAVRVLVGYVPDEAAWTQRVQLTLP TLPFVRVPVEDRVGVAQTAALIAKALTTREQLEQLIVAIFTDKARPDLPVDTYGPVIQRLEAYRKKPPIGKNKRVFGVVK SANAPFGCPGCFVNIKDTAELGALRSTQALVHNCQRVIFLGLDVSALRAALPSNIEFGVVLPEKRS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 58546; Mature: 58415
Theoretical pI: Translated: 6.85; Mature: 6.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALIRRVATTPFQWNKATPEDFVPNEYDVSELAIHLPALDAIWRPDGVISGVVTPMPPAS CCHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHCCHHHHHCCCCCCCCCCCCCCCCCC QCSLEVWNGVACEHEATVTVAADGDFATGSLQSSDAPGGRLLKLKAGSFVAKGWLNVETE CCCHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEEECCCEEECCEECEEEE LRMSPRDRQLVRAAARVSAGMATGQDLWAIYDVLREAMRTPSMGGSTPRHSTVAKNVEPV ECCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHH VQKASTTTYVGWSDIDFTQMGASNPLEMQCLTAAFKHLNGDLARGGGPSAGHKSAELVLL HHHCCCEEEECCCCCCHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEE RNAGDEFGDDATAPGTNTTEGADTLEDAQAAMLDVLPDSLARDATHPLLTGAVTLAASEA ECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH LKRAFARRRGLATSGNSFFAGSDLAYGLDSWLTRFSAFDYGDGNRQRLISAFCTLACCAV HHHHHHHHCCCCCCCCCEECCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH YYAKPATSQIVCGTVKEAVRVLVGYVPDEAAWTQRVQLTLPTLPFVRVPVEDRVGVAQTA HHCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHEEEEEEECCCCEEECCCHHCCCHHHHH ALIAKALTTREQLEQLIVAIFTDKARPDLPVDTYGPVIQRLEAYRKKPPIGKNKRVFGVV HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEE KSANAPFGCPGCFVNIKDTAELGALRSTQALVHNCQRVIFLGLDVSALRAALPSNIEFGV ECCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHCCCCCEEEE VLPEKRS ECCCCCC >Mature Secondary Structure ALIRRVATTPFQWNKATPEDFVPNEYDVSELAIHLPALDAIWRPDGVISGVVTPMPPAS CHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHCCHHHHHCCCCCCCCCCCCCCCCCC QCSLEVWNGVACEHEATVTVAADGDFATGSLQSSDAPGGRLLKLKAGSFVAKGWLNVETE CCCHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEEECCCEEECCEECEEEE LRMSPRDRQLVRAAARVSAGMATGQDLWAIYDVLREAMRTPSMGGSTPRHSTVAKNVEPV ECCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHH VQKASTTTYVGWSDIDFTQMGASNPLEMQCLTAAFKHLNGDLARGGGPSAGHKSAELVLL HHHCCCEEEECCCCCCHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEE RNAGDEFGDDATAPGTNTTEGADTLEDAQAAMLDVLPDSLARDATHPLLTGAVTLAASEA ECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH LKRAFARRRGLATSGNSFFAGSDLAYGLDSWLTRFSAFDYGDGNRQRLISAFCTLACCAV HHHHHHHHCCCCCCCCCEECCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH YYAKPATSQIVCGTVKEAVRVLVGYVPDEAAWTQRVQLTLPTLPFVRVPVEDRVGVAQTA HHCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHEEEEEEECCCCEEECCCHHCCCHHHHH ALIAKALTTREQLEQLIVAIFTDKARPDLPVDTYGPVIQRLEAYRKKPPIGKNKRVFGVV HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEE KSANAPFGCPGCFVNIKDTAELGALRSTQALVHNCQRVIFLGLDVSALRAALPSNIEFGV ECCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHCCEEEEECCCHHHHHHHCCCCCEEEE VLPEKRS ECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA