Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
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Accession | NC_007651 |
Length | 3,809,201 |
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The map label for this gene is 83719112
Identifier: 83719112
GI number: 83719112
Start: 1640225
End: 1641796
Strand: Direct
Name: 83719112
Synonym: BTH_I1449
Alternate gene names: NA
Gene position: 1640225-1641796 (Clockwise)
Preceding gene: 83719460
Following gene: 83719728
Centisome position: 43.06
GC content: 61.7
Gene sequence:
>1572_bases ATGACCGCGGCCAACGCCTATCCGGACGACATCGAAGCGCCCAAAGCCATGCTGCTCGAGCGCGATGCTCGCATTGGGCA TCTCGAGGACGTAGTCGAATCGCACAAGGCGGCGAACGCCACCGCCAAGGCAGAGATCGAGCATCTGAAGCTGCTGATTG CGAAGCTGCGCCGCATGCAGTTCGGTCGCAAGTCGGAGAAGCTCGATCGTCAGATCGAACAACTCGAACTGCGTCTGGAA GAACTCGAAGCGGACGAAGGCGCGGCTCCGATCGAAATCCCGAAGACACCTCGTACCGCGCCGGAACAGTCGCCTCGCAA GCCGCTGCCCGAGCATCTGCCACGTGAAGAGCAAACGCACTTGCCGCAATCGACCGAGACGTGCTCGGAATGCGGCGGCA AGCTCAAGCTGCTAGGCGAAGACGTCTCCGAACAACTTGAATATGTACCTGCGAGCTTCCGCGTAATCCGTCATGTGCGG CCCAAGTTCGCCTGCGCGTGCTGCGATCACATCGCGCAAGCAGCAGCGCCGAGTCGTCCCATCGAGCGCGGCCTGGCGGG CCCTGGACTACTCGCGCACGTGCTGGTCTCGAAGTTCGCAGACCACATCCCGCTGTATCGGCAGTCGGTCATGTATGCGC GTGAAGGCGTCGAACTCGACCGCTCGTTGCTCGCGAAGTGGGTCGGCCACGGCGCGACGCTTTTACAACCACTGGTCGAT GCATTACGCCGTCATGTGATGACCGGGACGAAGCTGCATGCCGACGACACGCCGGTCCCAGTGCTCGAACCGGGCAGCGG CAAGACGAAGACTGGCCGCTTGTGGGTCTATGTGCGTGACGATCGATCGTCAGCCGATATGACGCCGCCAGCGGTGTGGT TCGCTTACACGCCGGATCGCAAAGGCATCCATCCGCAACAACATCTCGAGACGTTCAGCGGCACGCTGCAAGCGGACGCC TATGGCGGCTACCAGGCTATCTACGAGACCGGACGCGTGAGGGAAGCTGCCTGCTGGGCGCATGCCCGACGCCAGTTCTA TGAGCTACACGCTGCGCGCCCGAACGCATTGAATACCGAAGCGCTCGAGCGTATCGGTGCGTTGTACAAGATCGAAGACG CGATACGCGGCAAACCGCCCGACGAGCGTCGTGCGTATCGAGAAGCACATGCCCGACCGCTTCTCAGTCAGCTTCACGCC TGGCTCACCGCCACGCTGGAGACACTCTCAAAGAAATCCGATACGAGTCGGGCGATTCTCTATGCGCTGAACCGATGGGA AGCGCTCACACGCTATTGCGACGACGGCCAACTCGAGATCGATAACCTGCCGGTCGAGCGAGCGTTGCGTGGAGTGGCCA TCGGGAGGCGGAATTACCTGTTCGCCGGTGCCGACTCCGGCGGCGAGCGCGCTGCCGCGATCTATAGCCTCATCGGAACG GCGAAGCTCAACGGCATCGATCCCGAGGCGTATCTGCGCTTCGTCCTTGCCCGCATTGCTGATCACGCAATCAATCGTGT CGATCAGCTCATGCCGTGGGCCATAGCTGATCAACTCCGCGACGACAGCTGA
Upstream 100 bases:
>100_bases TGTCGATGCTGCTCGAAGGTATCGACTGGCGCCAGCCGATACGAACGACCGAGCCGACATCGGCGTTGTAAACCCGTCGG CCGCCGCGTAAACTGCCGGC
Downstream 100 bases:
>100_bases CATCAAGATCCCGTCGTCAAGACGGCGCTGCCGACACGCTTACCGCTTACGCCCGCTTGGCATATCATCAAATCACGCGC GCGCGTCACAGTCACCGGTG
Product: TnpC protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 523; Mature: 522
Protein sequence:
>523_residues MTAANAYPDDIEAPKAMLLERDARIGHLEDVVESHKAANATAKAEIEHLKLLIAKLRRMQFGRKSEKLDRQIEQLELRLE ELEADEGAAPIEIPKTPRTAPEQSPRKPLPEHLPREEQTHLPQSTETCSECGGKLKLLGEDVSEQLEYVPASFRVIRHVR PKFACACCDHIAQAAAPSRPIERGLAGPGLLAHVLVSKFADHIPLYRQSVMYAREGVELDRSLLAKWVGHGATLLQPLVD ALRRHVMTGTKLHADDTPVPVLEPGSGKTKTGRLWVYVRDDRSSADMTPPAVWFAYTPDRKGIHPQQHLETFSGTLQADA YGGYQAIYETGRVREAACWAHARRQFYELHAARPNALNTEALERIGALYKIEDAIRGKPPDERRAYREAHARPLLSQLHA WLTATLETLSKKSDTSRAILYALNRWEALTRYCDDGQLEIDNLPVERALRGVAIGRRNYLFAGADSGGERAAAIYSLIGT AKLNGIDPEAYLRFVLARIADHAINRVDQLMPWAIADQLRDDS
Sequences:
>Translated_523_residues MTAANAYPDDIEAPKAMLLERDARIGHLEDVVESHKAANATAKAEIEHLKLLIAKLRRMQFGRKSEKLDRQIEQLELRLE ELEADEGAAPIEIPKTPRTAPEQSPRKPLPEHLPREEQTHLPQSTETCSECGGKLKLLGEDVSEQLEYVPASFRVIRHVR PKFACACCDHIAQAAAPSRPIERGLAGPGLLAHVLVSKFADHIPLYRQSVMYAREGVELDRSLLAKWVGHGATLLQPLVD ALRRHVMTGTKLHADDTPVPVLEPGSGKTKTGRLWVYVRDDRSSADMTPPAVWFAYTPDRKGIHPQQHLETFSGTLQADA YGGYQAIYETGRVREAACWAHARRQFYELHAARPNALNTEALERIGALYKIEDAIRGKPPDERRAYREAHARPLLSQLHA WLTATLETLSKKSDTSRAILYALNRWEALTRYCDDGQLEIDNLPVERALRGVAIGRRNYLFAGADSGGERAAAIYSLIGT AKLNGIDPEAYLRFVLARIADHAINRVDQLMPWAIADQLRDDS >Mature_522_residues TAANAYPDDIEAPKAMLLERDARIGHLEDVVESHKAANATAKAEIEHLKLLIAKLRRMQFGRKSEKLDRQIEQLELRLEE LEADEGAAPIEIPKTPRTAPEQSPRKPLPEHLPREEQTHLPQSTETCSECGGKLKLLGEDVSEQLEYVPASFRVIRHVRP KFACACCDHIAQAAAPSRPIERGLAGPGLLAHVLVSKFADHIPLYRQSVMYAREGVELDRSLLAKWVGHGATLLQPLVDA LRRHVMTGTKLHADDTPVPVLEPGSGKTKTGRLWVYVRDDRSSADMTPPAVWFAYTPDRKGIHPQQHLETFSGTLQADAY GGYQAIYETGRVREAACWAHARRQFYELHAARPNALNTEALERIGALYKIEDAIRGKPPDERRAYREAHARPLLSQLHAW LTATLETLSKKSDTSRAILYALNRWEALTRYCDDGQLEIDNLPVERALRGVAIGRRNYLFAGADSGGERAAAIYSLIGTA KLNGIDPEAYLRFVLARIADHAINRVDQLMPWAIADQLRDDS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transposase 25 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004291 [H]
Pfam domain/function: PF03050 Transposase_25 [H]
EC number: NA
Molecular weight: Translated: 58417; Mature: 58286
Theoretical pI: Translated: 7.17; Mature: 7.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAANAYPDDIEAPKAMLLERDARIGHLEDVVESHKAANATAKAEIEHLKLLIAKLRRMQ CCCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH FGRKSEKLDRQIEQLELRLEELEADEGAAPIEIPKTPRTAPEQSPRKPLPEHLPREEQTH CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCHHHC LPQSTETCSECGGKLKLLGEDVSEQLEYVPASFRVIRHVRPKFACACCDHIAQAAAPSRP CCCCHHHHHHCCCEEEEHHHHHHHHHHHCCHHHHHHHHHCHHHHHHHHHHHHHHCCCCCC IERGLAGPGLLAHVLVSKFADHIPLYRQSVMYAREGVELDRSLLAKWVGHGATLLQPLVD HHHCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHH ALRRHVMTGTKLHADDTPVPVLEPGSGKTKTGRLWVYVRDDRSSADMTPPAVWFAYTPDR HHHHHHHCCCEECCCCCCCCEECCCCCCCCCCEEEEEEECCCCCCCCCCCEEEEEECCCC KGIHPQQHLETFSGTLQADAYGGYQAIYETGRVREAACWAHARRQFYELHAARPNALNTE CCCCHHHHHHHHHCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHH ALERIGALYKIEDAIRGKPPDERRAYREAHARPLLSQLHAWLTATLETLSKKSDTSRAIL HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH YALNRWEALTRYCDDGQLEIDNLPVERALRGVAIGRRNYLFAGADSGGERAAAIYSLIGT HHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHH AKLNGIDPEAYLRFVLARIADHAINRVDQLMPWAIADQLRDDS HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure TAANAYPDDIEAPKAMLLERDARIGHLEDVVESHKAANATAKAEIEHLKLLIAKLRRMQ CCCCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH FGRKSEKLDRQIEQLELRLEELEADEGAAPIEIPKTPRTAPEQSPRKPLPEHLPREEQTH CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCHHHC LPQSTETCSECGGKLKLLGEDVSEQLEYVPASFRVIRHVRPKFACACCDHIAQAAAPSRP CCCCHHHHHHCCCEEEEHHHHHHHHHHHCCHHHHHHHHHCHHHHHHHHHHHHHHCCCCCC IERGLAGPGLLAHVLVSKFADHIPLYRQSVMYAREGVELDRSLLAKWVGHGATLLQPLVD HHHCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHH ALRRHVMTGTKLHADDTPVPVLEPGSGKTKTGRLWVYVRDDRSSADMTPPAVWFAYTPDR HHHHHHHCCCEECCCCCCCCEECCCCCCCCCCEEEEEEECCCCCCCCCCCEEEEEECCCC KGIHPQQHLETFSGTLQADAYGGYQAIYETGRVREAACWAHARRQFYELHAARPNALNTE CCCCHHHHHHHHHCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHH ALERIGALYKIEDAIRGKPPDERRAYREAHARPLLSQLHAWLTATLETLSKKSDTSRAIL HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH YALNRWEALTRYCDDGQLEIDNLPVERALRGVAIGRRNYLFAGADSGGERAAAIYSLIGT HHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHH AKLNGIDPEAYLRFVLARIADHAINRVDQLMPWAIADQLRDDS HHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9163424 [H]