| Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_007651 |
| Length | 3,809,201 |
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The map label for this gene is tkt [H]
Identifier: 83719441
GI number: 83719441
Start: 1340636
End: 1342708
Strand: Direct
Name: tkt [H]
Synonym: BTH_I1195
Alternate gene names: 83719441
Gene position: 1340636-1342708 (Clockwise)
Preceding gene: 83719313
Following gene: 83720633
Centisome position: 35.19
GC content: 68.07
Gene sequence:
>2073_bases ATGCCGCCCGTGCCCCGTTTTCTCGACTCGTTCTCCGGACTCGACATGACGACTTCGTCTCCCGCCTCCACCACCTTGAT GGCCAACGCGATCCGCGCGCTCGCGATGGACGCCGTCCAGCAAGCGAACTCCGGTCACCCCGGCATGCCGATGGGCATGG CCGAGATCGGCGTCGCGCTGTGGTCGCGCCACCTGAAGCACAACCCGACGAACCCGCATTGGGCCGACCGCGACCGCTTC GTGCTGTCGAACGGCCACGGCTCGATGCTGCTGTACTCGCTGCTGCACCTGACAGGCTACGATCTGCCGATCGAAGAGCT GAAGAATTTCCGGCAACTGCATTCGAAGACGCCGGGCCACCCGGAATACGGGATCACGCCGGGCGTCGAGACGACGACGG GCCCGCTCGGCCAGGGCCTCGCGAACGCGGTCGGCATGGCGCTCGGCGAGGCGCTGCTCGCCGCCGAGTTCAACCGCGAC GACGCGAAGATCGTCGATCACCACACGTACGTGTTCCTCGGCGACGGCTGCCTGATGGAAGGCATCTCGCACGAGGCCTG CTCGCTCGCGGGCACGCTGAAGCTCAACAAGCTGATCGCGCTCTATGACGACAACGGGATCTCGATCGACGGCGACGTCG TCAACTGGTTCCACGACGACACGCCGAAGCGCTTCGAGGCGTACGGCTGGAACGTGATTCCGAACGTGAACGGCCATGAC GTCGACGCGATCGACGCGGCGATCGCGAAGGCGAAGCGCTCGGACAAGCCGAGCCTCATCTGCTGCAAGACGCGCATCGG CAACGGCGCGGCGACGAAGGCGGGCGGCCACGACGTGCACGGCGCGCCGCTCGGCGCGGACGAAATCGCGAAGACCCGCG AGGCGCTCGGCTGGACGTGGGCGCCGTTCGTGATTCCGCAGGAAGTCTATGCGGCATGGGACGCGAAGGAGGCGGGCAAG CGCAGCGAAGACGACTGGAACGCGGCGTTCGCGCAATACCGCGCGAAGTACCCGGCCGAAGCGGCCGAATTCGAGCGCCG GATGGCGGGCACGCTGCCGGCCGATTGGGCCGCGAAGGCCGCGGCGATCGTCGCCGGCGCGAACGAGCGCGGCGAGACGG TCGCGACGCGCAAGGCGTCGCAGCAGACGATCGAGGGGCTCGCCGCCGTGCTGCCCGAGCTGCTCGGCGGCTCGGCGGAC CTGACGGGCTCGAACCTCACGAACTGGAAGGCGTCGAAGGCGGTTCGCGCGAATGCGGACGGCCCGGGCGTCCAGTGGGG CAACCATATCAACTACGGCGTGCGCGAATTCGGCATGAGCGCCGCGATCAACGGCCTCGTGCTGCACGGCGGCTACAAGC CGTTCGGCGGCACGTTCCTCACGTTCTCCGACTACAGCCGCAATGCGCTGCGCGTCGCCGCGCTGATGAAGGTGCCGTCG ATCTTCGTGTTCACGCACGATTCGATCGGCCTCGGCGAGGACGGCCCGACGCACCAGTCGGTCGAGCATGTCGCGAGCCT GCGCCTGATTCCCAACCTCGACGTCTGGCGTCCGGCGGACACGGTGGAGACGGCCGTCGCGTGGACCTACGCGGTCGCGC ACCAGCACCCGTCGTGCCTGATCTTCAGCCGCCAGAACCTCGCGTTCAACGCGCGCACCGATGCGCAGCTCGCGAACGTC GAGAAGGGCGGCTACGTGCTGCGCGACTGGGACGAAGAAATCGTCGCGCGCAAGATCATCCTGATCGCGACGGGCTCCGA AGTCGAGCTCGCGATGAAGGCGGTCGAGCCCCTCGCGCAGCAGGGGATCGCCGCGCGCGTCGTGTCGATGCCGTCGAGCG ACGTGTTCGACCGCCAGGACGCCGAGTACCGCGAGCGGGTGCTGCCGCACGGCGTGCGCCGCGTCGCGATCGAAGCGGGC GTCACCGATTTCTGGCGCAAGTACGTGGGCCTCGAAGGCGGCGTGGTCGGCATCGACACGTTCGGCGAGTCGGCCCCGGC CGGCGTGCTGTTCAAGCATTTCGGCTTCACTGTCGAGCACGTGATCGAAACGGCGAAGGCGGTGCTCGCGTAA
Upstream 100 bases:
>100_bases TTAAAATGACCCGCTTTGCAGCCTCGTCCGTCTGCTCGTCCGCATCGCGTCCCGCCGGCGCCGCACCGCGCGCCGGGAAC GGTTTGCCCGCGAGCTTCGG
Downstream 100 bases:
>100_bases CCCAATCGACGCCCGGGCGGCCGTGCCCTGCGCCGGCCGGGCGCGCGTGAAGCTGCACGAAGTATTTTTTCAGCCATCAG GAGATACATCATGACGATTC
Product: transketolase
Products: NA
Alternate protein names: TK 1 [H]
Number of amino acids: Translated: 690; Mature: 689
Protein sequence:
>690_residues MPPVPRFLDSFSGLDMTTSSPASTTLMANAIRALAMDAVQQANSGHPGMPMGMAEIGVALWSRHLKHNPTNPHWADRDRF VLSNGHGSMLLYSLLHLTGYDLPIEELKNFRQLHSKTPGHPEYGITPGVETTTGPLGQGLANAVGMALGEALLAAEFNRD DAKIVDHHTYVFLGDGCLMEGISHEACSLAGTLKLNKLIALYDDNGISIDGDVVNWFHDDTPKRFEAYGWNVIPNVNGHD VDAIDAAIAKAKRSDKPSLICCKTRIGNGAATKAGGHDVHGAPLGADEIAKTREALGWTWAPFVIPQEVYAAWDAKEAGK RSEDDWNAAFAQYRAKYPAEAAEFERRMAGTLPADWAAKAAAIVAGANERGETVATRKASQQTIEGLAAVLPELLGGSAD LTGSNLTNWKASKAVRANADGPGVQWGNHINYGVREFGMSAAINGLVLHGGYKPFGGTFLTFSDYSRNALRVAALMKVPS IFVFTHDSIGLGEDGPTHQSVEHVASLRLIPNLDVWRPADTVETAVAWTYAVAHQHPSCLIFSRQNLAFNARTDAQLANV EKGGYVLRDWDEEIVARKIILIATGSEVELAMKAVEPLAQQGIAARVVSMPSSDVFDRQDAEYRERVLPHGVRRVAIEAG VTDFWRKYVGLEGGVVGIDTFGESAPAGVLFKHFGFTVEHVIETAKAVLA
Sequences:
>Translated_690_residues MPPVPRFLDSFSGLDMTTSSPASTTLMANAIRALAMDAVQQANSGHPGMPMGMAEIGVALWSRHLKHNPTNPHWADRDRF VLSNGHGSMLLYSLLHLTGYDLPIEELKNFRQLHSKTPGHPEYGITPGVETTTGPLGQGLANAVGMALGEALLAAEFNRD DAKIVDHHTYVFLGDGCLMEGISHEACSLAGTLKLNKLIALYDDNGISIDGDVVNWFHDDTPKRFEAYGWNVIPNVNGHD VDAIDAAIAKAKRSDKPSLICCKTRIGNGAATKAGGHDVHGAPLGADEIAKTREALGWTWAPFVIPQEVYAAWDAKEAGK RSEDDWNAAFAQYRAKYPAEAAEFERRMAGTLPADWAAKAAAIVAGANERGETVATRKASQQTIEGLAAVLPELLGGSAD LTGSNLTNWKASKAVRANADGPGVQWGNHINYGVREFGMSAAINGLVLHGGYKPFGGTFLTFSDYSRNALRVAALMKVPS IFVFTHDSIGLGEDGPTHQSVEHVASLRLIPNLDVWRPADTVETAVAWTYAVAHQHPSCLIFSRQNLAFNARTDAQLANV EKGGYVLRDWDEEIVARKIILIATGSEVELAMKAVEPLAQQGIAARVVSMPSSDVFDRQDAEYRERVLPHGVRRVAIEAG VTDFWRKYVGLEGGVVGIDTFGESAPAGVLFKHFGFTVEHVIETAKAVLA >Mature_689_residues PPVPRFLDSFSGLDMTTSSPASTTLMANAIRALAMDAVQQANSGHPGMPMGMAEIGVALWSRHLKHNPTNPHWADRDRFV LSNGHGSMLLYSLLHLTGYDLPIEELKNFRQLHSKTPGHPEYGITPGVETTTGPLGQGLANAVGMALGEALLAAEFNRDD AKIVDHHTYVFLGDGCLMEGISHEACSLAGTLKLNKLIALYDDNGISIDGDVVNWFHDDTPKRFEAYGWNVIPNVNGHDV DAIDAAIAKAKRSDKPSLICCKTRIGNGAATKAGGHDVHGAPLGADEIAKTREALGWTWAPFVIPQEVYAAWDAKEAGKR SEDDWNAAFAQYRAKYPAEAAEFERRMAGTLPADWAAKAAAIVAGANERGETVATRKASQQTIEGLAAVLPELLGGSADL TGSNLTNWKASKAVRANADGPGVQWGNHINYGVREFGMSAAINGLVLHGGYKPFGGTFLTFSDYSRNALRVAALMKVPSI FVFTHDSIGLGEDGPTHQSVEHVASLRLIPNLDVWRPADTVETAVAWTYAVAHQHPSCLIFSRQNLAFNARTDAQLANVE KGGYVLRDWDEEIVARKIILIATGSEVELAMKAVEPLAQQGIAARVVSMPSSDVFDRQDAEYRERVLPHGVRRVAIEAGV TDFWRKYVGLEGGVVGIDTFGESAPAGVLFKHFGFTVEHVIETAKAVLA
Specific function: Unknown
COG id: COG0021
COG function: function code G; Transketolase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transketolase family [H]
Homologues:
Organism=Homo sapiens, GI205277463, Length=605, Percent_Identity=27.7685950413223, Blast_Score=160, Evalue=3e-39, Organism=Homo sapiens, GI4507521, Length=605, Percent_Identity=27.7685950413223, Blast_Score=160, Evalue=3e-39, Organism=Homo sapiens, GI133778974, Length=274, Percent_Identity=33.2116788321168, Blast_Score=112, Evalue=9e-25, Organism=Escherichia coli, GI48994911, Length=671, Percent_Identity=64.0834575260805, Blast_Score=877, Evalue=0.0, Organism=Escherichia coli, GI1788808, Length=666, Percent_Identity=60.6606606606607, Blast_Score=819, Evalue=0.0, Organism=Caenorhabditis elegans, GI17539652, Length=677, Percent_Identity=25.9970457902511, Blast_Score=152, Evalue=6e-37, Organism=Saccharomyces cerevisiae, GI6325331, Length=672, Percent_Identity=50.1488095238095, Blast_Score=616, Evalue=1e-177, Organism=Saccharomyces cerevisiae, GI6319593, Length=674, Percent_Identity=45.1038575667656, Blast_Score=550, Evalue=1e-157, Organism=Drosophila melanogaster, GI24666278, Length=263, Percent_Identity=33.4600760456274, Blast_Score=124, Evalue=3e-28, Organism=Drosophila melanogaster, GI45551847, Length=294, Percent_Identity=32.9931972789116, Blast_Score=122, Evalue=7e-28, Organism=Drosophila melanogaster, GI45550715, Length=294, Percent_Identity=32.9931972789116, Blast_Score=122, Evalue=7e-28, Organism=Drosophila melanogaster, GI24645119, Length=245, Percent_Identity=33.8775510204082, Blast_Score=102, Evalue=9e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009014 - InterPro: IPR015941 - InterPro: IPR005475 - InterPro: IPR005478 - InterPro: IPR020826 - InterPro: IPR005476 - InterPro: IPR005474 [H]
Pfam domain/function: PF02779 Transket_pyr; PF02780 Transketolase_C; PF00456 Transketolase_N [H]
EC number: =2.2.1.1 [H]
Molecular weight: Translated: 74352; Mature: 74220
Theoretical pI: Translated: 6.14; Mature: 6.14
Prosite motif: PS00801 TRANSKETOLASE_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPPVPRFLDSFSGLDMTTSSPASTTLMANAIRALAMDAVQQANSGHPGMPMGMAEIGVAL CCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHH WSRHLKHNPTNPHWADRDRFVLSNGHGSMLLYSLLHLTGYDLPIEELKNFRQLHSKTPGH HHHHHCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCC PEYGITPGVETTTGPLGQGLANAVGMALGEALLAAEFNRDDAKIVDHHTYVFLGDGCLME CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECEEEEEECCCHHHH GISHEACSLAGTLKLNKLIALYDDNGISIDGDVVNWFHDDTPKRFEAYGWNVIPNVNGHD CCCHHHHHHHHHEEEEEEEEEECCCCCEECCCEEECCCCCCCCHHHHCCCEECCCCCCCC VDAIDAAIAKAKRSDKPSLICCKTRIGNGAATKAGGHDVHGAPLGADEIAKTREALGWTW CHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCC APFVIPQEVYAAWDAKEAGKRSEDDWNAAFAQYRAKYPAEAAEFERRMAGTLPADWAAKA CCCCCCHHHHHHCCCHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHH AAIVAGANERGETVATRKASQQTIEGLAAVLPELLGGSADLTGSNLTNWKASKAVRANAD HHEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEECCCC GPGVQWGNHINYGVREFGMSAAINGLVLHGGYKPFGGTFLTFSDYSRNALRVAALMKVPS CCCCCCCCCCCCCHHHHHHHHHCCCEEEECCCCCCCCEEEEECCCCCCHHHHHHHHHCCE IFVFTHDSIGLGEDGPTHQSVEHVASLRLIPNLDVWRPADTVETAVAWTYAVAHQHPSCL EEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEE IFSRQNLAFNARTDAQLANVEKGGYVLRDWDEEIVARKIILIATGSEVELAMKAVEPLAQ EEECCCCEEECCCCCHHHCCCCCCEEEECCHHHHHHCEEEEEEECCHHHHHHHHHHHHHH QGIAARVVSMPSSDVFDRQDAEYRERVLPHGVRRVAIEAGVTDFWRKYVGLEGGVVGIDT CCHHEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCEEEEEC FGESAPAGVLFKHFGFTVEHVIETAKAVLA CCCCCCCHHHHHHHCCHHHHHHHHHHHHCC >Mature Secondary Structure PPVPRFLDSFSGLDMTTSSPASTTLMANAIRALAMDAVQQANSGHPGMPMGMAEIGVAL CCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHH WSRHLKHNPTNPHWADRDRFVLSNGHGSMLLYSLLHLTGYDLPIEELKNFRQLHSKTPGH HHHHHCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCC PEYGITPGVETTTGPLGQGLANAVGMALGEALLAAEFNRDDAKIVDHHTYVFLGDGCLME CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECEEEEEECCCHHHH GISHEACSLAGTLKLNKLIALYDDNGISIDGDVVNWFHDDTPKRFEAYGWNVIPNVNGHD CCCHHHHHHHHHEEEEEEEEEECCCCCEECCCEEECCCCCCCCHHHHCCCEECCCCCCCC VDAIDAAIAKAKRSDKPSLICCKTRIGNGAATKAGGHDVHGAPLGADEIAKTREALGWTW CHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCC APFVIPQEVYAAWDAKEAGKRSEDDWNAAFAQYRAKYPAEAAEFERRMAGTLPADWAAKA CCCCCCHHHHHHCCCHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHH AAIVAGANERGETVATRKASQQTIEGLAAVLPELLGGSADLTGSNLTNWKASKAVRANAD HHEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEECCCC GPGVQWGNHINYGVREFGMSAAINGLVLHGGYKPFGGTFLTFSDYSRNALRVAALMKVPS CCCCCCCCCCCCCHHHHHHHHHCCCEEEECCCCCCCCEEEEECCCCCCHHHHHHHHHCCE IFVFTHDSIGLGEDGPTHQSVEHVASLRLIPNLDVWRPADTVETAVAWTYAVAHQHPSCL EEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEE IFSRQNLAFNARTDAQLANVEKGGYVLRDWDEEIVARKIILIATGSEVELAMKAVEPLAQ EEECCCCEEECCCCCHHHCCCCCCEEEECCHHHHHHCEEEEEEECCHHHHHHHHHHHHHH QGIAARVVSMPSSDVFDRQDAEYRERVLPHGVRRVAIEAGVTDFWRKYVGLEGGVVGIDT CCHHEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCEEEEEC FGESAPAGVLFKHFGFTVEHVIETAKAVLA CCCCCCCHHHHHHHCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10952301 [H]