Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
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Accession | NC_007651 |
Length | 3,809,201 |
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The map label for this gene is 83719333
Identifier: 83719333
GI number: 83719333
Start: 1603959
End: 1605800
Strand: Direct
Name: 83719333
Synonym: BTH_I1421
Alternate gene names: NA
Gene position: 1603959-1605800 (Clockwise)
Preceding gene: 83718404
Following gene: 83719531
Centisome position: 42.11
GC content: 64.98
Gene sequence:
>1842_bases ATGAAGATACAGAAGTCCTTGAAAGACGGTTTCGCGCTTGGATTGTGCAGGGCGGCACGGCCGGTCGCCGCTGCCGCGCT CGCCGCGCTGCTCGTCGCCGCGTGCGGCGGCGACGACGGCGGCGGCGGCCCGTCGCTCGCGGCCGCGAACGTCGCAAACA CGAGCACGTCGACGAACGCGACAGCCGCCGGCGCGGCGAATAATGCGGCGCTCCCGCCGGATCAACCGTATATCGACAAC GATGTCTACGGCACCGGGCCGAACGACGCGGTCACCGACGCGACGGAGGGCGCGGCGGTCGTGCACCGGCAGGTGAAGAT CGGCGACCAGATCCTCACCTACACGGCGACGGCCGGCCACCTCGTGACGATCGATCCGGTCACGTCGAAGCCGAACGCGA AGATGTTCTACGTCGCATACACGCTCGACAATCCGAATCCGAGCAAGCCGCGCCCCGTTACGTTCTTCTACAACGGCGGC CCGGGCTCGTCGTCGGTGTACCTGCTGCTCGGTTCGTTCGGACCGAAGCGCTTGCAGTCGTCGTTCCCGAACTTCACGCC GCCCGCGCCGTACCGGTTGCGCGACAACCCCGAGAGCCTGCTCGACCGCTCGGACCTCGTGTTCATCAACCCGGTCGGCA CCGGCTACTCGGCCGCGATCGCACCGGCGAAGAACAAGGATTTCTGGGGCGTCGACCAGGACGCGCACTCGATCGACCGC TTCATCCAGCGCTACCTGACGAAGTACGCGCGCTGGAACTCGCCGAAGTTCCTGTTCGGCGAGTCGTACGGCACGGCGCG CAGCGCGGTGACGTCGTGGGTGCTGCATGAGGACGGCATCGAGCTGAACGGGATCACGCTCCAGTCGTCGATTCTCGACT ACGCGAACGCGGTGAGCGCGATCGGCATCTTCCCGACGCTCGCGGCCGATGCGTTCTACTGGAACAAGACGACCATCAGC CCGAAACCGGCCGATCTGGACGCGTACATGGCGCAGGCGCGCAGCTACGCGGACAACGTGCTCGCGCCGCTCGCGCAGGC GCCGAATCCGCAGGACGGCGGCTTCGTCAACGTGCGGCTGAACCTGAACCTCGCGGCCGCGCAGCAGATGGGCGCGTACA TCGGCACCGATCCGGTTTCGCTGATCCAGACGTTCGGCAATCCGGCCGCGCTCGGCAACGTGCCGTCGTCCGACGACAAC CCGCCGTACACGTTCTTCCTGACGCTCGTGCCGGGCGTCCAGATCGGCCAGTACGACGGGCGCGCGAACTACACGGGCAA GGGCATCGCGCCGTACATCCTGCCGAACTCGGGCAGCAACGATCCGTCGATCAGCAACGTCGGCGGCGCGTACACGGTGC TGTGGAACGACTACATCAACAACGACCTGAAGTACGTGTCGACGTCGTCGTTCGTCGATCTGAACGACCAGGTGTTCAAC AACTGGGACTTCAGCCACACGGACCCGACGGGCGCGAACCGCGGCGGCGGCAATACGCTGTATACGGCGGGCGATCTCGC CGCGACGATGAGCCTGAATCCGGACCTGAAGGTGTTGTCGGCGAACGGCTATTTCGACGCGGTGACGCCGTTCCACCAGA CCGAGCTCACGCTGCAGCAGATGCCGCTCGATCCGTCGATCAAGTCGGCGAACCTGACGATGAAATACTATCCGTCGGGC CACATGATCTATCTGAACGATAACTCGCGGATCGCGATGAAGGCGGATCTCGCGACGTTCTACGACGGCATCCTCACGGA TCGCAAGGCGCTGCAACGCGTGCTGCTGCGTCAGCAGAAGGCGCTGCAGTTAAAGCAACAGAAGCAACAGCAAGGGCAGT GA
Upstream 100 bases:
>100_bases GGGGTGCGCGTCGCATAACGGTCGCATTCCTGGCGAGGCGCGTCGATGAAATCATCCGTTTCAATCGGCGGAATTTATCG TTCTATTCGAGAGGGCAATA
Downstream 100 bases:
>100_bases TGCGAGGCTGGCCGTTTTCGGCCGCGCTGCCCGTTGCCGTGTGACGGCGGCGGGCGGCGCGGTTTGCGCGAACGGCTGTT TCGCGGCGATCTTCGCCTCC
Product: serine-type carboxypeptidase family protein
Products: NA
Alternate protein names: Serine Carboxypeptidase Family Protein; Carboxypeptidase-Related Protein; Serine Carboxypeptidase; Carboxypeptidase C; Serine-Type Carboxypeptidase Family Protein; S10 Family Peptidase; Carboxypeptidase; S10 Family Carboxypeptidase; Acetoin Dehydrogenase E1 Component Beta-Subunit; Carboxypeptidase-Like Protein; Serine Carboxypeptidase Superfamily; Peptidase S
Number of amino acids: Translated: 613; Mature: 613
Protein sequence:
>613_residues MKIQKSLKDGFALGLCRAARPVAAAALAALLVAACGGDDGGGGPSLAAANVANTSTSTNATAAGAANNAALPPDQPYIDN DVYGTGPNDAVTDATEGAAVVHRQVKIGDQILTYTATAGHLVTIDPVTSKPNAKMFYVAYTLDNPNPSKPRPVTFFYNGG PGSSSVYLLLGSFGPKRLQSSFPNFTPPAPYRLRDNPESLLDRSDLVFINPVGTGYSAAIAPAKNKDFWGVDQDAHSIDR FIQRYLTKYARWNSPKFLFGESYGTARSAVTSWVLHEDGIELNGITLQSSILDYANAVSAIGIFPTLAADAFYWNKTTIS PKPADLDAYMAQARSYADNVLAPLAQAPNPQDGGFVNVRLNLNLAAAQQMGAYIGTDPVSLIQTFGNPAALGNVPSSDDN PPYTFFLTLVPGVQIGQYDGRANYTGKGIAPYILPNSGSNDPSISNVGGAYTVLWNDYINNDLKYVSTSSFVDLNDQVFN NWDFSHTDPTGANRGGGNTLYTAGDLAATMSLNPDLKVLSANGYFDAVTPFHQTELTLQQMPLDPSIKSANLTMKYYPSG HMIYLNDNSRIAMKADLATFYDGILTDRKALQRVLLRQQKALQLKQQKQQQGQ
Sequences:
>Translated_613_residues MKIQKSLKDGFALGLCRAARPVAAAALAALLVAACGGDDGGGGPSLAAANVANTSTSTNATAAGAANNAALPPDQPYIDN DVYGTGPNDAVTDATEGAAVVHRQVKIGDQILTYTATAGHLVTIDPVTSKPNAKMFYVAYTLDNPNPSKPRPVTFFYNGG PGSSSVYLLLGSFGPKRLQSSFPNFTPPAPYRLRDNPESLLDRSDLVFINPVGTGYSAAIAPAKNKDFWGVDQDAHSIDR FIQRYLTKYARWNSPKFLFGESYGTARSAVTSWVLHEDGIELNGITLQSSILDYANAVSAIGIFPTLAADAFYWNKTTIS PKPADLDAYMAQARSYADNVLAPLAQAPNPQDGGFVNVRLNLNLAAAQQMGAYIGTDPVSLIQTFGNPAALGNVPSSDDN PPYTFFLTLVPGVQIGQYDGRANYTGKGIAPYILPNSGSNDPSISNVGGAYTVLWNDYINNDLKYVSTSSFVDLNDQVFN NWDFSHTDPTGANRGGGNTLYTAGDLAATMSLNPDLKVLSANGYFDAVTPFHQTELTLQQMPLDPSIKSANLTMKYYPSG HMIYLNDNSRIAMKADLATFYDGILTDRKALQRVLLRQQKALQLKQQKQQQGQ >Mature_613_residues MKIQKSLKDGFALGLCRAARPVAAAALAALLVAACGGDDGGGGPSLAAANVANTSTSTNATAAGAANNAALPPDQPYIDN DVYGTGPNDAVTDATEGAAVVHRQVKIGDQILTYTATAGHLVTIDPVTSKPNAKMFYVAYTLDNPNPSKPRPVTFFYNGG PGSSSVYLLLGSFGPKRLQSSFPNFTPPAPYRLRDNPESLLDRSDLVFINPVGTGYSAAIAPAKNKDFWGVDQDAHSIDR FIQRYLTKYARWNSPKFLFGESYGTARSAVTSWVLHEDGIELNGITLQSSILDYANAVSAIGIFPTLAADAFYWNKTTIS PKPADLDAYMAQARSYADNVLAPLAQAPNPQDGGFVNVRLNLNLAAAQQMGAYIGTDPVSLIQTFGNPAALGNVPSSDDN PPYTFFLTLVPGVQIGQYDGRANYTGKGIAPYILPNSGSNDPSISNVGGAYTVLWNDYINNDLKYVSTSSFVDLNDQVFN NWDFSHTDPTGANRGGGNTLYTAGDLAATMSLNPDLKVLSANGYFDAVTPFHQTELTLQQMPLDPSIKSANLTMKYYPSG HMIYLNDNSRIAMKADLATFYDGILTDRKALQRVLLRQQKALQLKQQKQQQGQ
Specific function: Unknown
COG id: COG2939
COG function: function code E; Carboxypeptidase C (cathepsin A)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 65667; Mature: 65667
Theoretical pI: Translated: 5.93; Mature: 5.93
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00588 FLAGELLA_BB_ROD
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIQKSLKDGFALGLCRAARPVAAAALAALLVAACGGDDGGGGPSLAAANVANTSTSTNA CCCHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCC TAAGAANNAALPPDQPYIDNDVYGTGPNDAVTDATEGAAVVHRQVKIGDQILTYTATAGH EECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHEEEHHHCCCEEEEEEECCCE LVTIDPVTSKPNAKMFYVAYTLDNPNPSKPRPVTFFYNGGPGSSSVYLLLGSFGPKRLQS EEEECCCCCCCCCEEEEEEEEECCCCCCCCCCEEEEECCCCCCCEEEEEEECCCHHHHHH SFPNFTPPAPYRLRDNPESLLDRSDLVFINPVGTGYSAAIAPAKNKDFWGVDQDAHSIDR CCCCCCCCCCCEECCCHHHHHCCCCEEEEEECCCCCCEEECCCCCCCCCCCCCHHHHHHH FIQRYLTKYARWNSPKFLFGESYGTARSAVTSWVLHEDGIELNGITLQSSILDYANAVSA HHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHEEECCCCEECCEEEHHHHHHHHHHHHH IGIFPTLAADAFYWNKTTISPKPADLDAYMAQARSYADNVLAPLAQAPNPQDGGFVNVRL HHHHHHHHHCEEEECCEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEE NLNLAAAQQMGAYIGTDPVSLIQTFGNPAALGNVPSSDDNPPYTFFLTLVPGVQIGQYDG EEEEHHHHHCCCCCCCCHHHHHHHCCCCCEECCCCCCCCCCCEEEEEEECCCCEEECCCC RANYTGKGIAPYILPNSGSNDPSISNVGGAYTVLWNDYINNDLKYVSTSSFVDLNDQVFN CCCCCCCCCCEEEECCCCCCCCCCCCCCCEEEEEEEHHHCCCCEEEECCCEEECCHHHHC NWDFSHTDPTGANRGGGNTLYTAGDLAATMSLNPDLKVLSANGYFDAVTPFHQTELTLQQ CCCCCCCCCCCCCCCCCCEEEECCCEEEEEECCCCEEEEEECCCCCCCCCCCHHCEEHHH MPLDPSIKSANLTMKYYPSGHMIYLNDNSRIAMKADLATFYDGILTDRKALQRVLLRQQK CCCCCCCCCCCEEEEEECCCCEEEEECCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHH ALQLKQQKQQQGQ HHHHHHHHHHCCC >Mature Secondary Structure MKIQKSLKDGFALGLCRAARPVAAAALAALLVAACGGDDGGGGPSLAAANVANTSTSTNA CCCHHHHHCCHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCC TAAGAANNAALPPDQPYIDNDVYGTGPNDAVTDATEGAAVVHRQVKIGDQILTYTATAGH EECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHEEEHHHCCCEEEEEEECCCE LVTIDPVTSKPNAKMFYVAYTLDNPNPSKPRPVTFFYNGGPGSSSVYLLLGSFGPKRLQS EEEECCCCCCCCCEEEEEEEEECCCCCCCCCCEEEEECCCCCCCEEEEEEECCCHHHHHH SFPNFTPPAPYRLRDNPESLLDRSDLVFINPVGTGYSAAIAPAKNKDFWGVDQDAHSIDR CCCCCCCCCCCEECCCHHHHHCCCCEEEEEECCCCCCEEECCCCCCCCCCCCCHHHHHHH FIQRYLTKYARWNSPKFLFGESYGTARSAVTSWVLHEDGIELNGITLQSSILDYANAVSA HHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHEEECCCCEECCEEEHHHHHHHHHHHHH IGIFPTLAADAFYWNKTTISPKPADLDAYMAQARSYADNVLAPLAQAPNPQDGGFVNVRL HHHHHHHHHCEEEECCEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEE NLNLAAAQQMGAYIGTDPVSLIQTFGNPAALGNVPSSDDNPPYTFFLTLVPGVQIGQYDG EEEEHHHHHCCCCCCCCHHHHHHHCCCCCEECCCCCCCCCCCEEEEEEECCCCEEECCCC RANYTGKGIAPYILPNSGSNDPSISNVGGAYTVLWNDYINNDLKYVSTSSFVDLNDQVFN CCCCCCCCCCEEEECCCCCCCCCCCCCCCEEEEEEEHHHCCCCEEEECCCEEECCHHHHC NWDFSHTDPTGANRGGGNTLYTAGDLAATMSLNPDLKVLSANGYFDAVTPFHQTELTLQQ CCCCCCCCCCCCCCCCCCEEEECCCEEEEEECCCCEEEEEECCCCCCCCCCCHHCEEHHH MPLDPSIKSANLTMKYYPSGHMIYLNDNSRIAMKADLATFYDGILTDRKALQRVLLRQQK CCCCCCCCCCCEEEEEECCCCEEEEECCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHH ALQLKQQKQQQGQ HHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA