Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
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Accession | NC_007651 |
Length | 3,809,201 |
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The map label for this gene is 83718404
Identifier: 83718404
GI number: 83718404
Start: 1601258
End: 1603354
Strand: Direct
Name: 83718404
Synonym: BTH_I1420
Alternate gene names: NA
Gene position: 1601258-1603354 (Clockwise)
Preceding gene: 83720879
Following gene: 83719333
Centisome position: 42.04
GC content: 70.43
Gene sequence:
>2097_bases ATGACGACGATCAGGGGCGGATCGAGGCGCGCGTCGCTGCCGGCGCTCGCGCTTCTCGGCGTGCTGCTCGGCGCATGCCA CAGCGACGACAACGCGCAGGTGAACACGCTGCCCGGCTTTGTCTCGGGCAACGTGCGCAAGACGGCCTACGACGGCGCGA GCGATGATCTGCTGACGGCGGGGCTCGGCAAGACAGGCCTCGGCAGCGACACGCGGCCCGGCTTCGCGAACCCGGCGCAA CCGACCGCGGCGGAACTGCGGCGTCTTGCGATCTACTCGAACTACCGCGCGCTCGTCGACATCACGCCGAACGGCGGCTA CGGGCGCTTCTGGGGGCCGAACGTCGACCTCGCGGGCAACGATACGCTCGGCGAAGGCAAGATTGCCGGCACCGAATATC TCGCGTACTCCGACGACGGCAGCGGACGCAAGAACGTCACGCTGCTCGTGCAGGTGCCGGCGAGCTTCGATCCGGCGAAT CCGTGCATCGTGACGGCGACGTCGTCGGGCTCGCGCGGCGTCTACGGCGCGATCGCCGCGGCGGGCGAGTGGGGGCTGAA GCGCGGCTGCGCGGTCGCGTACAACGACAAGGGCGGCGGCAACGGCGCGCACGAGATCGGCACGGGCGTCGTCACGCTGA TCGACGGCACGCTCGCGAGCGCATCGAGCGCGGGCAGCGCGAGCCTCTTCACCGCGAGCGAATCGAGCAGCGCGCTCGCC GCGTTCAACAGCGCGTTTCCGAACCGCTACGCGTACAAACATGCGCATTCGCAGCAGAATCCCGAGCAGGACTGGGGGCG CGTGACGCTGCAGGCGGTCGAGTTCGCATACTGGGCGCTGAACGAGCAGTTCGGTCCCGCCATCGACGGCGCGCGGCACG GCGTCCGCTATCGGCCGGGCGACATCACGACGATCGCCGCATCGGTCAGCAACGGCGGCGCAGCGGCGCTCGCGGCAGCC GAGCAGGACACGCGAGGCTGGATCACCGCGGTCGTCGTCGGCGAGCCGCAGATCAACGTGCGCATGACGCCGGGCGTGAC CGTCGAGCAGGGCGGCGTGCCTGCGCCGTCGTTCGGCCGGCCGCTCGCCGATTACGCGACGCTCGCGAACCTGCTGCAAC CATGCGCGGCGGCGGCCGTCGCCGCGGTGGGCGCGCCTTATCTCAGCGCGCTGCCCGTCGGGCTCACGCAGTCGATTCGC GTGCAGCGCTGCGCGACGCTCGCGGCGGCCGGGCTCGTGTCGGGCGCCGATACGGCGAGCCAGGCGAACGACGCGCTCGC GCAACTGCACGCGGCCGGCTACCTCGCCGATTCCGACCTGCTGCAGGCGCCGATGTGGGATTCGCAGGCGATTCCGGCGA TCGCGGTTACGTATGCGAACGCTTACACGCGCTCGCGCGTCACCGATAACCTCTGCAACTTCAGCTTCGCGACGACGAAC TCCGTGACGGGCGCCGTTGCTCCGCCCGCCACGTCGCCGATGACGAGCCTGTTCGGCGCGGGCAACGGCGTGCCGCCGAC GAACGGGATCAATCTCGTGTTCAACGGCGCGTCGGGCGGCGTCGACCACCGGCTTGCGACGCCGGACGCGAGCTTTGCGG GCGCGTTCTGCCTGCGCCAGCTGTGGACCGCGAACCAGCTCGGCATCGGCGCGAATGTCGACGCGGTGCGCGTGGCCGCG AATCTGCAGCGCAAGCCGGCGATCATCGTGCAAGGCCGCAGCGACGCGCTCGTGCCCGTCAATCACGCGTCGCGCGCGTA TGTCGCGCAAAACAGCGCGACCGAGGGCCGCGCGAGCCAGCTGTCGTTCTACGAAGTGACGAACGGCCAGCACTTCGACG CGTTCCTGTCGGTGCCCGGCTTCGACACGCGCTTCGTGCCGGTTCACTACTACGACGAACAGGCGCTCAACCTGATGTGG AATCACCTGAAGAGCGGCGCGCCGCTGCCGCCGTCGCAGGTGATCCGCACGGTGCCGCGCGGCGGCGTGCCGGGCGCCGC GCCCGCGCTGTCGACGGCGAATCTGCCGCCGATCGTCCAGTCGCCGGGCTCGAACGCGATCACCGTGAACGCGGGGGTGA TCGACGTGCCGCTCTGA
Upstream 100 bases:
>100_bases CAACGACGCCGCCCGCCGCGCGCGCCGGCCGTGCCTGGGCGCGGCGCGCGCCGCCCGGCGAGCGGGCGATTCGAACCAAT CAGGCAGACTGGGGGCAACA
Downstream 100 bases:
>100_bases CGCGCCGCGCGCGCTCGCTGGTCACGACGGCCGGCCCGCACATACGTGCGGCCGGCCGTTTTTCATGGGCCGGCGAGCCT TCGCCGCAAAGGCGCGATTC
Product: D-(-)-3-hydroxybutyrate-oligomer hydrolase
Products: NA
Alternate protein names: 3HB-oligomer hydrolase; 3HBOH [H]
Number of amino acids: Translated: 698; Mature: 697
Protein sequence:
>698_residues MTTIRGGSRRASLPALALLGVLLGACHSDDNAQVNTLPGFVSGNVRKTAYDGASDDLLTAGLGKTGLGSDTRPGFANPAQ PTAAELRRLAIYSNYRALVDITPNGGYGRFWGPNVDLAGNDTLGEGKIAGTEYLAYSDDGSGRKNVTLLVQVPASFDPAN PCIVTATSSGSRGVYGAIAAAGEWGLKRGCAVAYNDKGGGNGAHEIGTGVVTLIDGTLASASSAGSASLFTASESSSALA AFNSAFPNRYAYKHAHSQQNPEQDWGRVTLQAVEFAYWALNEQFGPAIDGARHGVRYRPGDITTIAASVSNGGAAALAAA EQDTRGWITAVVVGEPQINVRMTPGVTVEQGGVPAPSFGRPLADYATLANLLQPCAAAAVAAVGAPYLSALPVGLTQSIR VQRCATLAAAGLVSGADTASQANDALAQLHAAGYLADSDLLQAPMWDSQAIPAIAVTYANAYTRSRVTDNLCNFSFATTN SVTGAVAPPATSPMTSLFGAGNGVPPTNGINLVFNGASGGVDHRLATPDASFAGAFCLRQLWTANQLGIGANVDAVRVAA NLQRKPAIIVQGRSDALVPVNHASRAYVAQNSATEGRASQLSFYEVTNGQHFDAFLSVPGFDTRFVPVHYYDEQALNLMW NHLKSGAPLPPSQVIRTVPRGGVPGAAPALSTANLPPIVQSPGSNAITVNAGVIDVPL
Sequences:
>Translated_698_residues MTTIRGGSRRASLPALALLGVLLGACHSDDNAQVNTLPGFVSGNVRKTAYDGASDDLLTAGLGKTGLGSDTRPGFANPAQ PTAAELRRLAIYSNYRALVDITPNGGYGRFWGPNVDLAGNDTLGEGKIAGTEYLAYSDDGSGRKNVTLLVQVPASFDPAN PCIVTATSSGSRGVYGAIAAAGEWGLKRGCAVAYNDKGGGNGAHEIGTGVVTLIDGTLASASSAGSASLFTASESSSALA AFNSAFPNRYAYKHAHSQQNPEQDWGRVTLQAVEFAYWALNEQFGPAIDGARHGVRYRPGDITTIAASVSNGGAAALAAA EQDTRGWITAVVVGEPQINVRMTPGVTVEQGGVPAPSFGRPLADYATLANLLQPCAAAAVAAVGAPYLSALPVGLTQSIR VQRCATLAAAGLVSGADTASQANDALAQLHAAGYLADSDLLQAPMWDSQAIPAIAVTYANAYTRSRVTDNLCNFSFATTN SVTGAVAPPATSPMTSLFGAGNGVPPTNGINLVFNGASGGVDHRLATPDASFAGAFCLRQLWTANQLGIGANVDAVRVAA NLQRKPAIIVQGRSDALVPVNHASRAYVAQNSATEGRASQLSFYEVTNGQHFDAFLSVPGFDTRFVPVHYYDEQALNLMW NHLKSGAPLPPSQVIRTVPRGGVPGAAPALSTANLPPIVQSPGSNAITVNAGVIDVPL >Mature_697_residues TTIRGGSRRASLPALALLGVLLGACHSDDNAQVNTLPGFVSGNVRKTAYDGASDDLLTAGLGKTGLGSDTRPGFANPAQP TAAELRRLAIYSNYRALVDITPNGGYGRFWGPNVDLAGNDTLGEGKIAGTEYLAYSDDGSGRKNVTLLVQVPASFDPANP CIVTATSSGSRGVYGAIAAAGEWGLKRGCAVAYNDKGGGNGAHEIGTGVVTLIDGTLASASSAGSASLFTASESSSALAA FNSAFPNRYAYKHAHSQQNPEQDWGRVTLQAVEFAYWALNEQFGPAIDGARHGVRYRPGDITTIAASVSNGGAAALAAAE QDTRGWITAVVVGEPQINVRMTPGVTVEQGGVPAPSFGRPLADYATLANLLQPCAAAAVAAVGAPYLSALPVGLTQSIRV QRCATLAAAGLVSGADTASQANDALAQLHAAGYLADSDLLQAPMWDSQAIPAIAVTYANAYTRSRVTDNLCNFSFATTNS VTGAVAPPATSPMTSLFGAGNGVPPTNGINLVFNGASGGVDHRLATPDASFAGAFCLRQLWTANQLGIGANVDAVRVAAN LQRKPAIIVQGRSDALVPVNHASRAYVAQNSATEGRASQLSFYEVTNGQHFDAFLSVPGFDTRFVPVHYYDEQALNLMWN HLKSGAPLPPSQVIRTVPRGGVPGAAPALSTANLPPIVQSPGSNAITVNAGVIDVPL
Specific function: Participates in the degradation of poly-3- hydroxybutyrate (PHB). It works downstream of poly(3- hydroxybutyrate) depolymerase, hydrolyzing D(-)-3-hydroxybutyrate oligomers of various length (3HB-oligomers) into 3HB-monomers [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Secreted (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the D-(-)-3-hydroxybutyrate oligomer hydrolase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016582 [H]
Pfam domain/function: PF10605 3HBOH [H]
EC number: =3.1.1.22 [H]
Molecular weight: Translated: 71669; Mature: 71537
Theoretical pI: Translated: 6.58; Mature: 6.58
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTIRGGSRRASLPALALLGVLLGACHSDDNAQVNTLPGFVSGNVRKTAYDGASDDLLTA CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEECCCCEECCCEEEEECCCCCCCEEEE GLGKTGLGSDTRPGFANPAQPTAAELRRLAIYSNYRALVDITPNGGYGRFWGPNVDLAGN CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHEECCEEEEEECCCCCCCCCCCCCCCCCCC DTLGEGKIAGTEYLAYSDDGSGRKNVTLLVQVPASFDPANPCIVTATSSGSRGVYGAIAA CCCCCCCCCCCEEEEECCCCCCCCCEEEEEEECCCCCCCCCEEEEEECCCCCCCEEEEEE AGEWGLKRGCAVAYNDKGGGNGAHEIGTGVVTLIDGTLASASSAGSASLFTASESSSALA CCCCCCCCCCEEEECCCCCCCCHHHHCCCEEEEEECCHHCCCCCCCEEEEEECCCCCHHH AFNSAFPNRYAYKHAHSQQNPEQDWGRVTLQAVEFAYWALNEQFGPAIDGARHGVRYRPG HHHHCCCCCHHHHHHHCCCCCCHHHHHEEHHHHHHHHHHHCCCCCCCCCHHHCCCEECCC DITTIAASVSNGGAAALAAAEQDTRGWITAVVVGEPQINVRMTPGVTVEQGGVPAPSFGR CEEEEEEECCCCCEEEEEECCCCCCCEEEEEEECCCCEEEEECCCCEEECCCCCCCCCCC PLADYATLANLLQPCAAAAVAAVGAPYLSALPVGLTQSIRVQRCATLAAAGLVSGADTAS CHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCHH QANDALAQLHAAGYLADSDLLQAPMWDSQAIPAIAVTYANAYTRSRVTDNLCNFSFATTN HHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHCCEEEECC SVTGAVAPPATSPMTSLFGAGNGVPPTNGINLVFNGASGGVDHRLATPDASFAGAFCLRQ CCCCCCCCCCCCHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCEECCCCCHHHHHHHHHH LWTANQLGIGANVDAVRVAANLQRKPAIIVQGRSDALVPVNHASRAYVAQNSATEGRASQ HHCCCCCCCCCCCHHHHHHHCCCCCCEEEEECCCCCEEECCCCCCEEEECCCCCCCCHHE LSFYEVTNGQHFDAFLSVPGFDTRFVPVHYYDEQALNLMWNHLKSGAPLPPSQVIRTVPR EEEEEECCCCCEEEEEECCCCCCEEEEEEECCHHHHHHHHHHHHCCCCCCHHHHHHHCCC GGVPGAAPALSTANLPPIVQSPGSNAITVNAGVIDVPL CCCCCCCCCCCCCCCCCCEECCCCCEEEEECCEEECCC >Mature Secondary Structure TTIRGGSRRASLPALALLGVLLGACHSDDNAQVNTLPGFVSGNVRKTAYDGASDDLLTA CCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEECCCCEECCCEEEEECCCCCCCEEEE GLGKTGLGSDTRPGFANPAQPTAAELRRLAIYSNYRALVDITPNGGYGRFWGPNVDLAGN CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHEECCEEEEEECCCCCCCCCCCCCCCCCCC DTLGEGKIAGTEYLAYSDDGSGRKNVTLLVQVPASFDPANPCIVTATSSGSRGVYGAIAA CCCCCCCCCCCEEEEECCCCCCCCCEEEEEEECCCCCCCCCEEEEEECCCCCCCEEEEEE AGEWGLKRGCAVAYNDKGGGNGAHEIGTGVVTLIDGTLASASSAGSASLFTASESSSALA CCCCCCCCCCEEEECCCCCCCCHHHHCCCEEEEEECCHHCCCCCCCEEEEEECCCCCHHH AFNSAFPNRYAYKHAHSQQNPEQDWGRVTLQAVEFAYWALNEQFGPAIDGARHGVRYRPG HHHHCCCCCHHHHHHHCCCCCCHHHHHEEHHHHHHHHHHHCCCCCCCCCHHHCCCEECCC DITTIAASVSNGGAAALAAAEQDTRGWITAVVVGEPQINVRMTPGVTVEQGGVPAPSFGR CEEEEEEECCCCCEEEEEECCCCCCCEEEEEEECCCCEEEEECCCCEEECCCCCCCCCCC PLADYATLANLLQPCAAAAVAAVGAPYLSALPVGLTQSIRVQRCATLAAAGLVSGADTAS CHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCHH QANDALAQLHAAGYLADSDLLQAPMWDSQAIPAIAVTYANAYTRSRVTDNLCNFSFATTN HHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHCCEEEECC SVTGAVAPPATSPMTSLFGAGNGVPPTNGINLVFNGASGGVDHRLATPDASFAGAFCLRQ CCCCCCCCCCCCHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCEECCCCCHHHHHHHHHH LWTANQLGIGANVDAVRVAANLQRKPAIIVQGRSDALVPVNHASRAYVAQNSATEGRASQ HHCCCCCCCCCCCHHHHHHHCCCCCCEEEEECCCCCEEECCCCCCEEEECCCCCCCCHHE LSFYEVTNGQHFDAFLSVPGFDTRFVPVHYYDEQALNLMWNHLKSGAPLPPSQVIRTVPR EEEEEECCCCCEEEEEECCCCCCEEEEEEECCHHHHHHHHHHHHCCCCCCHHHHHHHCCC GGVPGAAPALSTANLPPIVQSPGSNAITVNAGVIDVPL CCCCCCCCCCCCCCCCCCEECCCCCEEEEECCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA