Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
---|---|
Accession | NC_007651 |
Length | 3,809,201 |
Click here to switch to the map view.
The map label for this gene is gmk [H]
Identifier: 83719185
GI number: 83719185
Start: 1785775
End: 1786458
Strand: Direct
Name: gmk [H]
Synonym: BTH_I1586
Alternate gene names: 83719185
Gene position: 1785775-1786458 (Clockwise)
Preceding gene: 83719925
Following gene: 83720583
Centisome position: 46.88
GC content: 64.77
Gene sequence:
>684_bases ATGACCGATTCGAACCGCGGCGGCGCGGCAGCCCATTCGCTGCACGCCGGCGTCTATCCCGGCAATCTCTTCATGGTCGT CGCGCCGTCGGGCGCGGGCAAGTCGACGCTCGTCAACGCGCTGCTGTCGAAGGATCCGGAGATCTGTCTGTCGATTTCGT ACACGACGCGCAAGCCGCGTTCCGGCGAGCAGGACGGCCAGCACTATCACTTCACGACCGTCGAGGATTTCCGCGCGCGC CACGCGAGCCACGAGTTTCTGGAGAGCGCGGAGGTGCACGGCAACTACTACGGCACGTCGCGCGTGTGGATCGAAGAGCA GATGAAGAGCGGCCACGATGTGCTGCTCGAAATCGATTGGCAGGGCGCGCAGCAAGTGAAGAAGCAGTTTCGCAACGCGG TCGGCATCTTCATTCTGCCGCCGTCGCTCGCGGCGCTCGAGGAGCGGCTGAAAAAGCGCGGGCAGGACGAGCCGAACGTG ATCACGCGGCGCCTGCTCGCCGCAGGCAGCGAGATCGCGCACGCGGCCGAAGCGGAGTACGTCGTGATCAACGAGACCTT CGAGCACGCGCTTGCCGAGCTCGAATGCATCGTCGCCGCGACGCGCCTGCGCTTCACGTCGCAATATGCGCGGCATGCCG AACTATTCGTCGAGCTCGGCATTCATCTGCCGCATGCGGAGTGA
Upstream 100 bases:
>100_bases CTCGAAGGCGGCCGCGAAGGAACTCGCGGACGCGTCGATGGCGCTCAAGCTGCTGATCGAGCAGATGCGCGAGCAAGTGC AAAACCTGGAGTAACGCAAC
Downstream 100 bases:
>100_bases CGGCGGCGAACGAGGCACATAAGGTAGAATAAGCAACATATTCAGAAGGAACGACCCAACATGGCTCGCATTACCGTTGA AGACTGCCTGAAGCAGATTC
Product: guanylate kinase
Products: NA
Alternate protein names: GMP kinase [H]
Number of amino acids: Translated: 227; Mature: 226
Protein sequence:
>227_residues MTDSNRGGAAAHSLHAGVYPGNLFMVVAPSGAGKSTLVNALLSKDPEICLSISYTTRKPRSGEQDGQHYHFTTVEDFRAR HASHEFLESAEVHGNYYGTSRVWIEEQMKSGHDVLLEIDWQGAQQVKKQFRNAVGIFILPPSLAALEERLKKRGQDEPNV ITRRLLAAGSEIAHAAEAEYVVINETFEHALAELECIVAATRLRFTSQYARHAELFVELGIHLPHAE
Sequences:
>Translated_227_residues MTDSNRGGAAAHSLHAGVYPGNLFMVVAPSGAGKSTLVNALLSKDPEICLSISYTTRKPRSGEQDGQHYHFTTVEDFRAR HASHEFLESAEVHGNYYGTSRVWIEEQMKSGHDVLLEIDWQGAQQVKKQFRNAVGIFILPPSLAALEERLKKRGQDEPNV ITRRLLAAGSEIAHAAEAEYVVINETFEHALAELECIVAATRLRFTSQYARHAELFVELGIHLPHAE >Mature_226_residues TDSNRGGAAAHSLHAGVYPGNLFMVVAPSGAGKSTLVNALLSKDPEICLSISYTTRKPRSGEQDGQHYHFTTVEDFRARH ASHEFLESAEVHGNYYGTSRVWIEEQMKSGHDVLLEIDWQGAQQVKKQFRNAVGIFILPPSLAALEERLKKRGQDEPNVI TRRLLAAGSEIAHAAEAEYVVINETFEHALAELECIVAATRLRFTSQYARHAELFVELGIHLPHAE
Specific function: Essential for recycling GMP and indirectly, cGMP [H]
COG id: COG0194
COG function: function code F; Guanylate kinase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 guanylate kinase-like domain [H]
Homologues:
Organism=Homo sapiens, GI226874831, Length=172, Percent_Identity=37.7906976744186, Blast_Score=119, Evalue=2e-27, Organism=Homo sapiens, GI226874833, Length=175, Percent_Identity=37.1428571428571, Blast_Score=119, Evalue=2e-27, Organism=Homo sapiens, GI4504221, Length=175, Percent_Identity=37.1428571428571, Blast_Score=119, Evalue=2e-27, Organism=Homo sapiens, GI262118259, Length=134, Percent_Identity=32.089552238806, Blast_Score=78, Evalue=5e-15, Organism=Homo sapiens, GI4505237, Length=134, Percent_Identity=32.089552238806, Blast_Score=78, Evalue=5e-15, Organism=Homo sapiens, GI262118255, Length=134, Percent_Identity=32.089552238806, Blast_Score=78, Evalue=6e-15, Organism=Homo sapiens, GI262118263, Length=134, Percent_Identity=32.089552238806, Blast_Score=78, Evalue=6e-15, Organism=Homo sapiens, GI21361598, Length=198, Percent_Identity=24.2424242424242, Blast_Score=69, Evalue=4e-12, Organism=Homo sapiens, GI38570142, Length=174, Percent_Identity=26.4367816091954, Blast_Score=67, Evalue=2e-11, Organism=Escherichia coli, GI1790080, Length=201, Percent_Identity=48.2587064676617, Blast_Score=199, Evalue=1e-52, Organism=Caenorhabditis elegans, GI193203132, Length=180, Percent_Identity=35, Blast_Score=113, Evalue=6e-26, Organism=Caenorhabditis elegans, GI17508835, Length=180, Percent_Identity=35, Blast_Score=113, Evalue=9e-26, Organism=Caenorhabditis elegans, GI71988041, Length=183, Percent_Identity=25.6830601092896, Blast_Score=66, Evalue=1e-11, Organism=Caenorhabditis elegans, GI71988048, Length=171, Percent_Identity=26.9005847953216, Blast_Score=66, Evalue=2e-11, Organism=Saccharomyces cerevisiae, GI6320662, Length=182, Percent_Identity=37.9120879120879, Blast_Score=132, Evalue=7e-32, Organism=Drosophila melanogaster, GI21356141, Length=153, Percent_Identity=41.1764705882353, Blast_Score=121, Evalue=3e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008144 - InterPro: IPR008145 - InterPro: IPR020590 - InterPro: IPR017665 [H]
Pfam domain/function: PF00625 Guanylate_kin [H]
EC number: =2.7.4.8 [H]
Molecular weight: Translated: 25186; Mature: 25054
Theoretical pI: Translated: 6.45; Mature: 6.45
Prosite motif: PS00856 GUANYLATE_KINASE_1 ; PS50052 GUANYLATE_KINASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDSNRGGAAAHSLHAGVYPGNLFMVVAPSGAGKSTLVNALLSKDPEICLSISYTTRKPR CCCCCCCCCHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHCCCCCEEEEEEECCCCCC SGEQDGQHYHFTTVEDFRARHASHEFLESAEVHGNYYGTSRVWIEEQMKSGHDVLLEIDW CCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHCCCEECCEEEEHHHHHCCCCEEEEEECC QGAQQVKKQFRNAVGIFILPPSLAALEERLKKRGQDEPNVITRRLLAAGSEIAHAAEAEY CCHHHHHHHHHHCCEEEEECCCHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHCCCCE VVINETFEHALAELECIVAATRLRFTSQYARHAELFVELGIHLPHAE EEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure TDSNRGGAAAHSLHAGVYPGNLFMVVAPSGAGKSTLVNALLSKDPEICLSISYTTRKPR CCCCCCCCHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHCCCCCEEEEEEECCCCCC SGEQDGQHYHFTTVEDFRARHASHEFLESAEVHGNYYGTSRVWIEEQMKSGHDVLLEIDW CCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHCCCEECCEEEEHHHHHCCCCEEEEEECC QGAQQVKKQFRNAVGIFILPPSLAALEERLKKRGQDEPNVITRRLLAAGSEIAHAAEAEY CCHHHHHHHHHHCCEEEEECCCHHHHHHHHHHCCCCCHHHHHHHHHHCCHHHHHHCCCCE VVINETFEHALAELECIVAATRLRFTSQYARHAELFVELGIHLPHAE EEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA