Definition | Burkholderia thailandensis E264 chromosome chromosome I, complete sequence. |
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Accession | NC_007651 |
Length | 3,809,201 |
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The map label for this gene is 83718898
Identifier: 83718898
GI number: 83718898
Start: 1961810
End: 1963072
Strand: Direct
Name: 83718898
Synonym: BTH_I1754
Alternate gene names: NA
Gene position: 1961810-1963072 (Clockwise)
Preceding gene: 83721649
Following gene: 83719223
Centisome position: 51.5
GC content: 63.18
Gene sequence:
>1263_bases ATGCCGAGACTTGCCACCGTTGTTGCAGGCCAATCCGTTCACTCTGCACAAACTGCGATGCAAGACACACAACAACGTGA TGCCGTCGATGTCTTCGTCGGCGTCGATGTCGGTAAAGGCCAGCATCACGCCGTCGCACTCGATCGGAACGGCAAGCGTC TGTACAACAAGGCGCTACCCAACGACGAGGCCAAGCTGCGCGCCCTCATCGCCGAACTCAAGACTCACGGTCGACTCCTG TTCGTCGTCGACCAACCTTCCACCATCGGCGCGCTGCCGGTGGCCGTAGCCCGTGCTGAAGGCGTACTCGTCGCCTATCT GCCGGGACTGGCCATGCGCCGCATCGCCGATCTGCATGCAGGTGAAGCCAAGACCGATGCCCGCGATGCCGCGATCATTG CCGAAGCCGCCCGCTCGATGCCACATACGCTGCGCTCACTTCGATTGGCTGACGAGCAACTCGCCGAGCTCACCATGCTG TGCGGCTTCGACGATGATCTCGCCGCCCAGGTCACTCAAACCAGCAACCGCATTCGCGGCCTGCTTACTCAAATCCATCC GGCGCTCGAGCGCGTTCTCGGACCCCGCCTCGACCATCCGGCAGTGCTCGATCTGCTTGAGCGCTACCCGTCGCCCGCCG CGCTTGCCTCAACCAGCGAGAAGACGCTTGCTAACCGCCTGACCAAGCTCGCGCCCCGCATGGGCAAAAGCTTGGCGGCC GAGATCGTTCAGGCTCTGAGCGAACAAGCCGTGATCGTGCCCGGCACGCAAGCTGCCACCATCGTCATGCCTCGTTTGGC CCAGCAGCTTGCGGCCTTGCGTAAGCAGCGCGACGAGGTCGCGGCCGAAGTTGAGCAACTGGTGCTTGCTCACCCTCTTT GGCCGGTCCTGACCAGCATGCCGGGAGTCGGCGTCAGGACCGCCGCCAGACTCCTGACCGAAGTCGCCCATAAGGCCTTC GCTTCGGCTGCACACTTGGCGGCCTACGCTGGCCTTGCCCCGGTCACCCGGCGCTCAGGCTCGTCTATCCGAGGCGAACA TCCATCCAGACGCGGCAACAAGGTGCTAAAGCGCGCCTTGTTCCTATCCGCCTTCGCTGCCTTACGAGACCCAGTCTCAC GGGCCTATTACTCCCGCAAGATCCAGCAAGGCAAGCGCCACAACCAAGCCCTCATCGCACTGGCACGGCGACGCTGCGAC GTCCTGTTCGCCATGCTGCGTGACGGCACCATTTACCAACCCAAGTCAGCCCCTACCGCTTGA
Upstream 100 bases:
>100_bases GCAGTCATGATCCGGGGGGTGTTGTCACCGGGCCTGGTGGGTGGCTGGTGATCGCTGATAGGGGTTTGGCCGGGATATCC CGACGCCGTCCGTAACGTGG
Downstream 100 bases:
>100_bases CGAAACACATAGGGGCACCCCCCGGATGACGAATGCGGGCTTGAGCGAAAAGACCGACCGTGATCCGCCCCCCACGAAGC TGGACGGCTAAAGGCCAGGC
Product: ISBma3, transposase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 420; Mature: 419
Protein sequence:
>420_residues MPRLATVVAGQSVHSAQTAMQDTQQRDAVDVFVGVDVGKGQHHAVALDRNGKRLYNKALPNDEAKLRALIAELKTHGRLL FVVDQPSTIGALPVAVARAEGVLVAYLPGLAMRRIADLHAGEAKTDARDAAIIAEAARSMPHTLRSLRLADEQLAELTML CGFDDDLAAQVTQTSNRIRGLLTQIHPALERVLGPRLDHPAVLDLLERYPSPAALASTSEKTLANRLTKLAPRMGKSLAA EIVQALSEQAVIVPGTQAATIVMPRLAQQLAALRKQRDEVAAEVEQLVLAHPLWPVLTSMPGVGVRTAARLLTEVAHKAF ASAAHLAAYAGLAPVTRRSGSSIRGEHPSRRGNKVLKRALFLSAFAALRDPVSRAYYSRKIQQGKRHNQALIALARRRCD VLFAMLRDGTIYQPKSAPTA
Sequences:
>Translated_420_residues MPRLATVVAGQSVHSAQTAMQDTQQRDAVDVFVGVDVGKGQHHAVALDRNGKRLYNKALPNDEAKLRALIAELKTHGRLL FVVDQPSTIGALPVAVARAEGVLVAYLPGLAMRRIADLHAGEAKTDARDAAIIAEAARSMPHTLRSLRLADEQLAELTML CGFDDDLAAQVTQTSNRIRGLLTQIHPALERVLGPRLDHPAVLDLLERYPSPAALASTSEKTLANRLTKLAPRMGKSLAA EIVQALSEQAVIVPGTQAATIVMPRLAQQLAALRKQRDEVAAEVEQLVLAHPLWPVLTSMPGVGVRTAARLLTEVAHKAF ASAAHLAAYAGLAPVTRRSGSSIRGEHPSRRGNKVLKRALFLSAFAALRDPVSRAYYSRKIQQGKRHNQALIALARRRCD VLFAMLRDGTIYQPKSAPTA >Mature_419_residues PRLATVVAGQSVHSAQTAMQDTQQRDAVDVFVGVDVGKGQHHAVALDRNGKRLYNKALPNDEAKLRALIAELKTHGRLLF VVDQPSTIGALPVAVARAEGVLVAYLPGLAMRRIADLHAGEAKTDARDAAIIAEAARSMPHTLRSLRLADEQLAELTMLC GFDDDLAAQVTQTSNRIRGLLTQIHPALERVLGPRLDHPAVLDLLERYPSPAALASTSEKTLANRLTKLAPRMGKSLAAE IVQALSEQAVIVPGTQAATIVMPRLAQQLAALRKQRDEVAAEVEQLVLAHPLWPVLTSMPGVGVRTAARLLTEVAHKAFA SAAHLAAYAGLAPVTRRSGSSIRGEHPSRRGNKVLKRALFLSAFAALRDPVSRAYYSRKIQQGKRHNQALIALARRRCDV LFAMLRDGTIYQPKSAPTA
Specific function: Unknown
COG id: COG3547
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003346 - InterPro: IPR002525 [H]
Pfam domain/function: PF02371 Transposase_20; PF01548 Transposase_9 [H]
EC number: NA
Molecular weight: Translated: 45318; Mature: 45187
Theoretical pI: Translated: 10.83; Mature: 10.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRLATVVAGQSVHSAQTAMQDTQQRDAVDVFVGVDVGKGQHHAVALDRNGKRLYNKALP CCCHHHHHCCCHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCEEEEEECCCHHHHHHCCC NDEAKLRALIAELKTHGRLLFVVDQPSTIGALPVAVARAEGVLVAYLPGLAMRRIADLHA CCHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHCCEEEEHHHHHHHHHHHHHHC GEAKTDARDAAIIAEAARSMPHTLRSLRLADEQLAELTMLCGFDDDLAAQVTQTSNRIRG CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH LLTQIHPALERVLGPRLDHPAVLDLLERYPSPAALASTSEKTLANRLTKLAPRMGKSLAA HHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHH EIVQALSEQAVIVPGTQAATIVMPRLAQQLAALRKQRDEVAAEVEQLVLAHPLWPVLTSM HHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCC PGVGVRTAARLLTEVAHKAFASAAHLAAYAGLAPVTRRSGSSIRGEHPSRRGNKVLKRAL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCHHHHHHHHHHH FLSAFAALRDPVSRAYYSRKIQQGKRHNQALIALARRRCDVLFAMLRDGTIYQPKSAPTA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCC >Mature Secondary Structure PRLATVVAGQSVHSAQTAMQDTQQRDAVDVFVGVDVGKGQHHAVALDRNGKRLYNKALP CCHHHHHCCCHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCEEEEEECCCHHHHHHCCC NDEAKLRALIAELKTHGRLLFVVDQPSTIGALPVAVARAEGVLVAYLPGLAMRRIADLHA CCHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHCCEEEEHHHHHHHHHHHHHHC GEAKTDARDAAIIAEAARSMPHTLRSLRLADEQLAELTMLCGFDDDLAAQVTQTSNRIRG CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH LLTQIHPALERVLGPRLDHPAVLDLLERYPSPAALASTSEKTLANRLTKLAPRMGKSLAA HHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHH EIVQALSEQAVIVPGTQAATIVMPRLAQQLAALRKQRDEVAAEVEQLVLAHPLWPVLTSM HHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCC PGVGVRTAARLLTEVAHKAFASAAHLAAYAGLAPVTRRSGSSIRGEHPSRRGNKVLKRAL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCHHHHHHHHHHH FLSAFAALRDPVSRAYYSRKIQQGKRHNQALIALARRRCDVLFAMLRDGTIYQPKSAPTA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2821490; 12000953 [H]