Click here to switch to the map view.

The map label for this gene is 83718797

Identifier: 83718797

GI number: 83718797

Start: 1361482

End: 1361904

Strand: Direct

Name: 83718797

Synonym: BTH_I1215

Alternate gene names: NA

Gene position: 1361482-1361904 (Clockwise)

Preceding gene: 83720441

Following gene: 83720229

Centisome position: 35.74

GC content: 64.3

Gene sequence:

>423_bases
ATGGCGATGCTCTGGGTCAAGACCTTTCATATCGTGCTGATCGCATCGTGGTTCGCGGGGCTCTTCTATCTGCCGCGCAT
CTATGTGAACCTCGCGATGGAATCCGATCCCGCCGCGGTCCGGCGGCTGCTCGCGATGGCGCGCAAGCTGTTTCGCTTCA
TGACGATCATCGCGGTGCCCGCGCTCGCGTGCGGGCTGTGGCTGTGGCTCGTGATCGGCATCGGGCAGGGGCAGGGCTGG
GTGCACGCGAAGCTCGCGGTCGTGCTGCTGCTTGTCGTTTATCACGCGTACTGCGGGCATCTGCTGAAGGTGTTCGAGCG
CGGCGAGAACCGCCGCTCGGACAAGTGGTACCGCGTGTTCAACGAGCTGCCGGTGCTCGGGATGCTCGCGGCCGTCGCGC
TTGCGGTGATCAAGCCGTTTTGA

Upstream 100 bases:

>100_bases
TGCATGCGCGCGGCCCGGTCGGGCTCGAAGGGCTCACGTCGCTGAAGTACGTGGTGCTCGGGCACGGCGAAGGGCGTCAG
TAACGAAGGGGGAATGATCG

Downstream 100 bases:

>100_bases
GCGCGGGCGGCGCGCTGGCCGTCGCGGTTTCGGCGTCGGCGGACGCGCTGGTCCGATGACAGAGCCCCGGCCGTTGCGGC
CGGGGTTTTTCATTTGGCGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 140; Mature: 139

Protein sequence:

>140_residues
MAMLWVKTFHIVLIASWFAGLFYLPRIYVNLAMESDPAAVRRLLAMARKLFRFMTIIAVPALACGLWLWLVIGIGQGQGW
VHAKLAVVLLLVVYHAYCGHLLKVFERGENRRSDKWYRVFNELPVLGMLAAVALAVIKPF

Sequences:

>Translated_140_residues
MAMLWVKTFHIVLIASWFAGLFYLPRIYVNLAMESDPAAVRRLLAMARKLFRFMTIIAVPALACGLWLWLVIGIGQGQGW
VHAKLAVVLLLVVYHAYCGHLLKVFERGENRRSDKWYRVFNELPVLGMLAAVALAVIKPF
>Mature_139_residues
AMLWVKTFHIVLIASWFAGLFYLPRIYVNLAMESDPAAVRRLLAMARKLFRFMTIIAVPALACGLWLWLVIGIGQGQGWV
HAKLAVVLLLVVYHAYCGHLLKVFERGENRRSDKWYRVFNELPVLGMLAAVALAVIKPF

Specific function: Unknown

COG id: COG1981

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0093 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014351
- InterPro:   IPR008457
- InterPro:   IPR005265 [H]

Pfam domain/function: PF05425 CopD; PF03653 UPF0093 [H]

EC number: NA

Molecular weight: Translated: 15914; Mature: 15782

Theoretical pI: Translated: 10.56; Mature: 10.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAMLWVKTFHIVLIASWFAGLFYLPRIYVNLAMESDPAAVRRLLAMARKLFRFMTIIAVP
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
ALACGLWLWLVIGIGQGQGWVHAKLAVVLLLVVYHAYCGHLLKVFERGENRRSDKWYRVF
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
NELPVLGMLAAVALAVIKPF
HHCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
AMLWVKTFHIVLIASWFAGLFYLPRIYVNLAMESDPAAVRRLLAMARKLFRFMTIIAVP
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
ALACGLWLWLVIGIGQGQGWVHAKLAVVLLLVVYHAYCGHLLKVFERGENRRSDKWYRVF
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
NELPVLGMLAAVALAVIKPF
HHCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9252185 [H]