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The map label for this gene is ydhM [C]

Identifier: 83718759

GI number: 83718759

Start: 2237712

End: 2238278

Strand: Reverse

Name: ydhM [C]

Synonym: BTH_I1974

Alternate gene names: 83718759

Gene position: 2238278-2237712 (Counterclockwise)

Preceding gene: 83719922

Following gene: 83719695

Centisome position: 58.76

GC content: 67.9

Gene sequence:

>567_bases
ATGCGTTATTCACCGAAACACAAGGAGGCCAGCCGGGCGCGCCTCGTCGAGGCGGGCGCCGCGCTTGCAAAGCGCAACGG
CTTCGCGAACACCGGCATGGATGCGCTCACCGCGGCAGCCGGCGTGACGACGGGCGCGTTCTATTCGCAATTCCGCTCGA
AGCCGGAATTCCTGCACGCGATCGTCGAGCATGAGATGTCGAAGGTGCTCGCGACGGTCGAGAATCGCTCGAAAGACGAT
CTCGTCGCCGCGCTGCGAAGCTATCTGAGCGCCGCGCACGCCGATCATCCGGAGCTCGGCTGCCCCGTGCCCGCGCTCGG
CGCGGAAATCGCGCGCGCCGATGTCGCGACCCGCAAGATGTTCGAGGATCTGATCAAGCGCTTCCAGGCGTCGCTCGCGA
GCGCGCTCGACGACGACGAAGCCGCCTGGACGCTCGGATGCGCGGCGATCGGCGCGGTGCTCGTCGCTCGCGCGATGGCG
ACGCCCGCGCGCCGCAGCGAAGTGCTGCACGCGGTGCTCGCGTACACGATGCGATCGTTCGAGGGCGACACGCGCAGGAA
GAAGTGA

Upstream 100 bases:

>100_bases
GATAACGATCGTTACCGTAACGGACGTTATTCTATACTTCCATTAACGTCAATCGAACAAAGCCTCGAAAATCGATCAGG
GCCTCGAAAACGGAACGGAC

Downstream 100 bases:

>100_bases
CGGACGCGCGGCGCGCGAGCGCCGATGCGATGCGCACGCGCGCTTCGCAAACGCCCGCGCGCCGCGCGCCCTCGCGCCGA
GCCGCCAGTCGACGGCCGAT

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; Regulatory Protein TetR

Number of amino acids: Translated: 188; Mature: 188

Protein sequence:

>188_residues
MRYSPKHKEASRARLVEAGAALAKRNGFANTGMDALTAAAGVTTGAFYSQFRSKPEFLHAIVEHEMSKVLATVENRSKDD
LVAALRSYLSAAHADHPELGCPVPALGAEIARADVATRKMFEDLIKRFQASLASALDDDEAAWTLGCAAIGAVLVARAMA
TPARRSEVLHAVLAYTMRSFEGDTRRKK

Sequences:

>Translated_188_residues
MRYSPKHKEASRARLVEAGAALAKRNGFANTGMDALTAAAGVTTGAFYSQFRSKPEFLHAIVEHEMSKVLATVENRSKDD
LVAALRSYLSAAHADHPELGCPVPALGAEIARADVATRKMFEDLIKRFQASLASALDDDEAAWTLGCAAIGAVLVARAMA
TPARRSEVLHAVLAYTMRSFEGDTRRKK
>Mature_188_residues
MRYSPKHKEASRARLVEAGAALAKRNGFANTGMDALTAAAGVTTGAFYSQFRSKPEFLHAIVEHEMSKVLATVENRSKDD
LVAALRSYLSAAHADHPELGCPVPALGAEIARADVATRKMFEDLIKRFQASLASALDDDEAAWTLGCAAIGAVLVARAMA
TPARRSEVLHAVLAYTMRSFEGDTRRKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20259; Mature: 20259

Theoretical pI: Translated: 9.50; Mature: 9.50

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRYSPKHKEASRARLVEAGAALAKRNGFANTGMDALTAAAGVTTGAFYSQFRSKPEFLHA
CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHH
IVEHEMSKVLATVENRSKDDLVAALRSYLSAAHADHPELGCPVPALGAEIARADVATRKM
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHH
FEDLIKRFQASLASALDDDEAAWTLGCAAIGAVLVARAMATPARRSEVLHAVLAYTMRSF
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
EGDTRRKK
CCCCCCCC
>Mature Secondary Structure
MRYSPKHKEASRARLVEAGAALAKRNGFANTGMDALTAAAGVTTGAFYSQFRSKPEFLHA
CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHH
IVEHEMSKVLATVENRSKDDLVAALRSYLSAAHADHPELGCPVPALGAEIARADVATRKM
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHH
FEDLIKRFQASLASALDDDEAAWTLGCAAIGAVLVARAMATPARRSEVLHAVLAYTMRSF
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
EGDTRRKK
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA