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The map label for this gene is cobD [H]

Identifier: 83718751

GI number: 83718751

Start: 1875426

End: 1876466

Strand: Direct

Name: cobD [H]

Synonym: BTH_I1666

Alternate gene names: 83718751

Gene position: 1875426-1876466 (Clockwise)

Preceding gene: 83719482

Following gene: 83720885

Centisome position: 49.23

GC content: 66.19

Gene sequence:

>1041_bases
GTGGCGGGCGCCACAGTCGGCGCAAGCCGGAGCCATCCGGCGCGCCCGCTGTGCTATCTTTACGCGAAAAATCAATCATC
CCAGAACGGCACGGCCCTTCGCATGACTTTCTTCTCGGTTCTCCTTGCCCTCATCATCGAACAGGTCCGCGCGCTGTCGC
CGAGCAATCCGGTGTTCGCGCTGTTTCAGTCTCATGCGGAATCGGCTGCGCACGGCTTCGACGCCGGCAAAAAGAAGCAC
GGCGTGCTCGCGTGGCTCGTCGTCGTGCTGCCCTGGGTGCTCGGCGTCGGGCTCGTCTACTTCCTGTTGTACAAGGTGAG
CTTCGTGCTCGCGTTCCTCTGGAACATCGCCGTCGTGTACTTCACGCTCGGGTTCAGGCAGTTCAGCCATTACTTCACCG
ATATCCATCTCGCGCTCAACAACGACGACGTGCCGCGCGCGCGCGACATCCTGCGAGAATGGACGGGCATCGACACGGTC
GACATGCCGGTCAGCGAAATCGTTCGCCACACGCTGATCCATGCGGTCGTCGCGTCGCATCGGCACGTGTTCGGCGTGTT
TTTCTGGTTCGTGCTGCCGGTCGGCCCGGCCGGCGCGGTGCTGTATCGGATCGCCGAATATCTGTCGCGCAGCTGGTCGG
TGCCGGCGGACGACCGCACCGCGGCGTTCTCGACGTTCGCGCAGCGCGCGTTCTTCGTGATCGATTGGGTGCCGGCGCGC
CTGACCGCGCTCGGCTTCGCGATCGTCGGCAACTTCGAGGACGCGATCTATGCCTGGCGCAATCACACGCGCCAGTGGCC
CGACCCGAACGATGGCGTGCTGCTCGCGGCCGGCAGCGGTGCGCTCGGCGCGCGGCTCGCGGGCCCGCTCGCGGAGCCGT
CGAGCGTCGATGCGCTCGCGGCGGGCGACAGCGGTCCGATCACGGTCGGCGACGATTGCTCGCCACGCACGCTGCAATCG
GCCGTCGGCCTCGTGTGGCGCGCCGTGATCCTGTGGATGCTGCTCCTGCTCATGCTGACGATCGCGGTCTGGGTGTCGTG
A

Upstream 100 bases:

>100_bases
TCGCGATGCCGTATCCGCGCGGACCGGTCGGCGGCCAGTATTTCATCTGGGGCGCGACGGCCGGCATGCTGCGCAACCTG
TATCGCTTTCTCGCGGCCTA

Downstream 100 bases:

>100_bases
CGCGGCGTGCGTTGATGTCGAGCCAGGGCTCGCCAACGAACAAGCCGGCTTCGAGCCGGCTTTTTTTCGCCCATTTCCCG
GCGCGCTTCGGTGCTTCGGG

Product: CobD/CbiB family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 346; Mature: 345

Protein sequence:

>346_residues
MAGATVGASRSHPARPLCYLYAKNQSSQNGTALRMTFFSVLLALIIEQVRALSPSNPVFALFQSHAESAAHGFDAGKKKH
GVLAWLVVVLPWVLGVGLVYFLLYKVSFVLAFLWNIAVVYFTLGFRQFSHYFTDIHLALNNDDVPRARDILREWTGIDTV
DMPVSEIVRHTLIHAVVASHRHVFGVFFWFVLPVGPAGAVLYRIAEYLSRSWSVPADDRTAAFSTFAQRAFFVIDWVPAR
LTALGFAIVGNFEDAIYAWRNHTRQWPDPNDGVLLAAGSGALGARLAGPLAEPSSVDALAAGDSGPITVGDDCSPRTLQS
AVGLVWRAVILWMLLLLMLTIAVWVS

Sequences:

>Translated_346_residues
MAGATVGASRSHPARPLCYLYAKNQSSQNGTALRMTFFSVLLALIIEQVRALSPSNPVFALFQSHAESAAHGFDAGKKKH
GVLAWLVVVLPWVLGVGLVYFLLYKVSFVLAFLWNIAVVYFTLGFRQFSHYFTDIHLALNNDDVPRARDILREWTGIDTV
DMPVSEIVRHTLIHAVVASHRHVFGVFFWFVLPVGPAGAVLYRIAEYLSRSWSVPADDRTAAFSTFAQRAFFVIDWVPAR
LTALGFAIVGNFEDAIYAWRNHTRQWPDPNDGVLLAAGSGALGARLAGPLAEPSSVDALAAGDSGPITVGDDCSPRTLQS
AVGLVWRAVILWMLLLLMLTIAVWVS
>Mature_345_residues
AGATVGASRSHPARPLCYLYAKNQSSQNGTALRMTFFSVLLALIIEQVRALSPSNPVFALFQSHAESAAHGFDAGKKKHG
VLAWLVVVLPWVLGVGLVYFLLYKVSFVLAFLWNIAVVYFTLGFRQFSHYFTDIHLALNNDDVPRARDILREWTGIDTVD
MPVSEIVRHTLIHAVVASHRHVFGVFFWFVLPVGPAGAVLYRIAEYLSRSWSVPADDRTAAFSTFAQRAFFVIDWVPARL
TALGFAIVGNFEDAIYAWRNHTRQWPDPNDGVLLAAGSGALGARLAGPLAEPSSVDALAAGDSGPITVGDDCSPRTLQSA
VGLVWRAVILWMLLLLMLTIAVWVS

Specific function: Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group [H]

COG id: COG1270

COG function: function code H; Cobalamin biosynthesis protein CobD/CbiB

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CobD/CbiB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004485 [H]

Pfam domain/function: PF03186 CobD_Cbib [H]

EC number: NA

Molecular weight: Translated: 37936; Mature: 37805

Theoretical pI: Translated: 8.26; Mature: 8.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGATVGASRSHPARPLCYLYAKNQSSQNGTALRMTFFSVLLALIIEQVRALSPSNPVFA
CCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
LFQSHAESAAHGFDAGKKKHGVLAWLVVVLPWVLGVGLVYFLLYKVSFVLAFLWNIAVVY
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FTLGFRQFSHYFTDIHLALNNDDVPRARDILREWTGIDTVDMPVSEIVRHTLIHAVVASH
HHHHHHHHHHHHHEEEEEECCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHH
RHVFGVFFWFVLPVGPAGAVLYRIAEYLSRSWSVPADDRTAAFSTFAQRAFFVIDWVPAR
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHEECHHHH
LTALGFAIVGNFEDAIYAWRNHTRQWPDPNDGVLLAAGSGALGARLAGPLAEPSSVDALA
HHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCHHHHCCCCCCCCCCCEEE
AGDSGPITVGDDCSPRTLQSAVGLVWRAVILWMLLLLMLTIAVWVS
CCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
AGATVGASRSHPARPLCYLYAKNQSSQNGTALRMTFFSVLLALIIEQVRALSPSNPVFA
CCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
LFQSHAESAAHGFDAGKKKHGVLAWLVVVLPWVLGVGLVYFLLYKVSFVLAFLWNIAVVY
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FTLGFRQFSHYFTDIHLALNNDDVPRARDILREWTGIDTVDMPVSEIVRHTLIHAVVASH
HHHHHHHHHHHHHEEEEEECCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHH
RHVFGVFFWFVLPVGPAGAVLYRIAEYLSRSWSVPADDRTAAFSTFAQRAFFVIDWVPAR
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHEECHHHH
LTALGFAIVGNFEDAIYAWRNHTRQWPDPNDGVLLAAGSGALGARLAGPLAEPSSVDALA
HHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCHHHHCCCCCCCCCCCEEE
AGDSGPITVGDDCSPRTLQSAVGLVWRAVILWMLLLLMLTIAVWVS
CCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA