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The map label for this gene is fliD [H]

Identifier: 83593870

GI number: 83593870

Start: 2949070

End: 2950725

Strand: Direct

Name: fliD [H]

Synonym: Rru_A2535

Alternate gene names: 83593870

Gene position: 2949070-2950725 (Clockwise)

Preceding gene: 83593869

Following gene: 83593871

Centisome position: 67.75

GC content: 60.33

Gene sequence:

>1656_bases
ATGAGCACTTCGGTTTCAAGCAGCACGGTCACCACCGCCACCAGCGGCAGCGGCACGACCTATATTTCGGGCACTTCGGG
ATTTGATAGCTCGGCGCTGATCAAAGCCGCCGTTAACGCCCGTATGCAGCCGGCCTATACCCTGGATGCGGCGATCAAGG
ATGCCGGCACCAAGGTTACGTCGTGGCAGGAGATGCTGACCGATCTCACGGCGATTTCTGACTCCCTGAAGCCGCTCTCA
AGCGCCAAGGGCGCGGTGTATTCAACCTTTACCGCTTATCTCAATTCATCGACGCTGACCACGCCAAGCAGCTATGTGGC
CGCCACCGTCACCGATGGCGCCGCCGCCGGCATCTACGATGTGAAGATCGAGCGACTGGCCACCACCCATAAGGTCGCGG
CCAATGCGGTGGCGACCGCGACCACCGTGGGGCCGGGCAGCTTTACCTTAAAGGCGGGCACGGCCGAAGGGGCGACGATC
ACCCTGGACAAGGCCACCTCGCTGAGCGATCTGGCCAAGGCGATCAACGCCCAAAGCGCCACCTCGGGCGTCAGCGCCAC
TTTGGTGAAAACCAGCGACAACCAATCGACCCTGGTACTCTCGGCCACGACAACCGGCGTGGCGATCACCGCCACCGATA
CCGATGGCCTGCTGGCGGGACTCGGTCTTGACAGCGGCGATTTCACCGTCGATGGCGAAAGCCTGAAAGCCAAACTGACC
ATCGACGGCGTGACGGTCACCAGCAGCACCAATGACATCAAGGACCTTGTTCCCGGCGTCTCCCTCAACCTTTACGCCGC
CACCGGCACCGGCTCCATCACCTTGGAAATCGGTCAGGATCTGAGCGCGCTGAAGAAACAGGTCGAGACCTTCGTCAAGG
CCTTCAATGCCTATCGCACCTTTGCCCTGACCCAACAGGCGACCGACGAGAACGGCGCCGCCGATACGGCCATTCTGTTC
GGCGACGGGCTGCTGCGCAGCGCCAATTCCGCGATCTTCGACGCCATCAACGCCAATACCAAGGTTGGCGGCGTCACCCT
GGCCAATTTCGGTATCACCATGGGTACGGGCAATATGCTCGAGATCGACGACGCCGCTCTGCAAAAGGCCTTGCTCCAGG
ATCCCAAAGCCATCCAGGCGTTTTTTCAGACGTCCAGCACCTCGACGTCACCCGATCTCGGCGTCTATCAGGCCGGGGGA
AAGGTCGCCACGGGCGATTACACGGTGAACGTCACGGTCGACGGATCCGGCGCGGTGACCGGCGCCACGATCAATGGCGT
GGCCCTGGCCGTCAATGGCACAACCCTGACAGGAACCACGGGAAGCGCTTATGAGGGGGTAACCCTGGTCTATACCGGCA
AGGAAGCGGGCACCCATACCGCGACCTTATCGATTAGCCGAGGTTTGGCCGACACCATGCTGTCGAGCCTGGAGACCTAT
ACGAATTCCTCGACGGGATTGATCGCCAACAAGGTGGCCAATCTCAATCAAACGATCGCCACCAAGCAGAGCCGCCGTGA
CGAAATCGCCACCTCGGCCGCAAGTTACGAAGACCAGCTCGTCAAGTATTACGCCCGCCTTGAAGCCCAGATCCAGGCTT
CAAAGACTACGCTCCAAAAAATCGAAGCCCTGTTCTTCTCGAAAAACAACGACTAA

Upstream 100 bases:

>100_bases
GCTGCTGCGCTAACGGTTAGCCTTAAGGGGATGAGGGGGGTGGAGCCCACGACCAACCACCCACCCCCCTCAGCCTTTTT
TTATGTCGGGGAGGCGGTCG

Downstream 100 bases:

>100_bases
CCCCGGACCCTGGAGAGACTAAAGATGAGCACTATGAGCCAGGCGATGGCGGCCTATGGAACCGCCCGGCGCGCCCAGAC
CCCCCTGAAAATCGTTGTCG

Product: flagellar hook-associated protein 2 (FliD, filament cap protein)

Products: NA

Alternate protein names: HAP2; Filament cap protein [H]

Number of amino acids: Translated: 551; Mature: 550

Protein sequence:

>551_residues
MSTSVSSSTVTTATSGSGTTYISGTSGFDSSALIKAAVNARMQPAYTLDAAIKDAGTKVTSWQEMLTDLTAISDSLKPLS
SAKGAVYSTFTAYLNSSTLTTPSSYVAATVTDGAAAGIYDVKIERLATTHKVAANAVATATTVGPGSFTLKAGTAEGATI
TLDKATSLSDLAKAINAQSATSGVSATLVKTSDNQSTLVLSATTTGVAITATDTDGLLAGLGLDSGDFTVDGESLKAKLT
IDGVTVTSSTNDIKDLVPGVSLNLYAATGTGSITLEIGQDLSALKKQVETFVKAFNAYRTFALTQQATDENGAADTAILF
GDGLLRSANSAIFDAINANTKVGGVTLANFGITMGTGNMLEIDDAALQKALLQDPKAIQAFFQTSSTSTSPDLGVYQAGG
KVATGDYTVNVTVDGSGAVTGATINGVALAVNGTTLTGTTGSAYEGVTLVYTGKEAGTHTATLSISRGLADTMLSSLETY
TNSSTGLIANKVANLNQTIATKQSRRDEIATSAASYEDQLVKYYARLEAQIQASKTTLQKIEALFFSKNND

Sequences:

>Translated_551_residues
MSTSVSSSTVTTATSGSGTTYISGTSGFDSSALIKAAVNARMQPAYTLDAAIKDAGTKVTSWQEMLTDLTAISDSLKPLS
SAKGAVYSTFTAYLNSSTLTTPSSYVAATVTDGAAAGIYDVKIERLATTHKVAANAVATATTVGPGSFTLKAGTAEGATI
TLDKATSLSDLAKAINAQSATSGVSATLVKTSDNQSTLVLSATTTGVAITATDTDGLLAGLGLDSGDFTVDGESLKAKLT
IDGVTVTSSTNDIKDLVPGVSLNLYAATGTGSITLEIGQDLSALKKQVETFVKAFNAYRTFALTQQATDENGAADTAILF
GDGLLRSANSAIFDAINANTKVGGVTLANFGITMGTGNMLEIDDAALQKALLQDPKAIQAFFQTSSTSTSPDLGVYQAGG
KVATGDYTVNVTVDGSGAVTGATINGVALAVNGTTLTGTTGSAYEGVTLVYTGKEAGTHTATLSISRGLADTMLSSLETY
TNSSTGLIANKVANLNQTIATKQSRRDEIATSAASYEDQLVKYYARLEAQIQASKTTLQKIEALFFSKNND
>Mature_550_residues
STSVSSSTVTTATSGSGTTYISGTSGFDSSALIKAAVNARMQPAYTLDAAIKDAGTKVTSWQEMLTDLTAISDSLKPLSS
AKGAVYSTFTAYLNSSTLTTPSSYVAATVTDGAAAGIYDVKIERLATTHKVAANAVATATTVGPGSFTLKAGTAEGATIT
LDKATSLSDLAKAINAQSATSGVSATLVKTSDNQSTLVLSATTTGVAITATDTDGLLAGLGLDSGDFTVDGESLKAKLTI
DGVTVTSSTNDIKDLVPGVSLNLYAATGTGSITLEIGQDLSALKKQVETFVKAFNAYRTFALTQQATDENGAADTAILFG
DGLLRSANSAIFDAINANTKVGGVTLANFGITMGTGNMLEIDDAALQKALLQDPKAIQAFFQTSSTSTSPDLGVYQAGGK
VATGDYTVNVTVDGSGAVTGATINGVALAVNGTTLTGTTGSAYEGVTLVYTGKEAGTHTATLSISRGLADTMLSSLETYT
NSSTGLIANKVANLNQTIATKQSRRDEIATSAASYEDQLVKYYARLEAQIQASKTTLQKIEALFFSKNND

Specific function: Required for the morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the

COG id: COG1345

COG function: function code N; Flagellar capping protein

Gene ontology:

Cell location: Secreted. Bacterial flagellum [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliD family [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010810
- InterPro:   IPR010809
- InterPro:   IPR003481 [H]

Pfam domain/function: PF07196 Flagellin_IN; PF07195 FliD_C; PF02465 FliD_N [H]

EC number: NA

Molecular weight: Translated: 56183; Mature: 56052

Theoretical pI: Translated: 4.55; Mature: 4.55

Prosite motif: PS00012 PHOSPHOPANTETHEINE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTSVSSSTVTTATSGSGTTYISGTSGFDSSALIKAAVNARMQPAYTLDAAIKDAGTKVT
CCCCCCCCEEEEEECCCCEEEEECCCCCCCHHHHHHHHCCCCCCCEEHHHHHHHCCCCCH
SWQEMLTDLTAISDSLKPLSSAKGAVYSTFTAYLNSSTLTTPSSYVAATVTDGAAAGIYD
HHHHHHHHHHHHHHHHCHHHHCCCCHHEEHHHHHCCCCCCCCCCEEEEEECCCCCCCEEE
VKIERLATTHKVAANAVATATTVGPGSFTLKAGTAEGATITLDKATSLSDLAKAINAQSA
EEHHHHHHHHHHHHHHHEEEEEECCCCEEEEECCCCCCEEEEECCCCHHHHHHHHCCCCC
TSGVSATLVKTSDNQSTLVLSATTTGVAITATDTDGLLAGLGLDSGDFTVDGESLKAKLT
CCCCEEEEEEECCCCCEEEEEEECCCEEEEEECCCCEEEECCCCCCCEEECCCCEEEEEE
IDGVTVTSSTNDIKDLVPGVSLNLYAATGTGSITLEIGQDLSALKKQVETFVKAFNAYRT
EEEEEEECCCCHHHHHCCCCEEEEEEEECCCEEEEEECCCHHHHHHHHHHHHHHHHHHHE
FALTQQATDENGAADTAILFGDGLLRSANSAIFDAINANTKVGGVTLANFGITMGTGNML
EEEECCCCCCCCCCCEEEEECCCHHHCCCCHHEECCCCCCEECCEEEEECEEEECCCCEE
EIDDAALQKALLQDPKAIQAFFQTSSTSTSPDLGVYQAGGKVATGDYTVNVTVDGSGAVT
EECHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCEEECCCEEEECCEEEEEEECCCCCEE
GATINGVALAVNGTTLTGTTGSAYEGVTLVYTGKEAGTHTATLSISRGLADTMLSSLETY
EEEECCEEEEEECEEEECCCCCCCCCEEEEEECCCCCCEEEEEEECCCHHHHHHHHHHHH
TNSSTGLIANKVANLNQTIATKQSRRDEIATSAASYEDQLVKYYARLEAQIQASKTTLQK
CCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IEALFFSKNND
HHHHHCCCCCC
>Mature Secondary Structure 
STSVSSSTVTTATSGSGTTYISGTSGFDSSALIKAAVNARMQPAYTLDAAIKDAGTKVT
CCCCCCCEEEEEECCCCEEEEECCCCCCCHHHHHHHHCCCCCCCEEHHHHHHHCCCCCH
SWQEMLTDLTAISDSLKPLSSAKGAVYSTFTAYLNSSTLTTPSSYVAATVTDGAAAGIYD
HHHHHHHHHHHHHHHHCHHHHCCCCHHEEHHHHHCCCCCCCCCCEEEEEECCCCCCCEEE
VKIERLATTHKVAANAVATATTVGPGSFTLKAGTAEGATITLDKATSLSDLAKAINAQSA
EEHHHHHHHHHHHHHHHEEEEEECCCCEEEEECCCCCCEEEEECCCCHHHHHHHHCCCCC
TSGVSATLVKTSDNQSTLVLSATTTGVAITATDTDGLLAGLGLDSGDFTVDGESLKAKLT
CCCCEEEEEEECCCCCEEEEEEECCCEEEEEECCCCEEEECCCCCCCEEECCCCEEEEEE
IDGVTVTSSTNDIKDLVPGVSLNLYAATGTGSITLEIGQDLSALKKQVETFVKAFNAYRT
EEEEEEECCCCHHHHHCCCCEEEEEEEECCCEEEEEECCCHHHHHHHHHHHHHHHHHHHE
FALTQQATDENGAADTAILFGDGLLRSANSAIFDAINANTKVGGVTLANFGITMGTGNML
EEEECCCCCCCCCCCEEEEECCCHHHCCCCHHEECCCCCCEECCEEEEECEEEECCCCEE
EIDDAALQKALLQDPKAIQAFFQTSSTSTSPDLGVYQAGGKVATGDYTVNVTVDGSGAVT
EECHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCEEECCCEEEECCEEEEEEECCCCCEE
GATINGVALAVNGTTLTGTTGSAYEGVTLVYTGKEAGTHTATLSISRGLADTMLSSLETY
EEEECCEEEEEECEEEECCCCCCCCCEEEEEECCCCCCEEEEEEECCCHHHHHHHHHHHH
TNSSTGLIANKVANLNQTIATKQSRRDEIATSAASYEDQLVKYYARLEAQIQASKTTLQK
CCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IEALFFSKNND
HHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10678962; 10984043 [H]