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The map label for this gene is fliC [C]

Identifier: 83593869

GI number: 83593869

Start: 2948086

End: 2948982

Strand: Direct

Name: fliC [C]

Synonym: Rru_A2534

Alternate gene names: 83593869

Gene position: 2948086-2948982 (Clockwise)

Preceding gene: 83593862

Following gene: 83593870

Centisome position: 67.73

GC content: 61.65

Gene sequence:

>897_bases
ATGCCCGTCATCACGACGAATACCTCGGCCAACTCGGCGCTGCGCTACCTCAACATGAACGCCGCCGAACAGACCAACTC
CTTAAACCGCATCGCCAGCGGTTCGAAAATCAACCGTGCGTCGGACGACGCCTCGGGTCTGGCCGTGGCCACCAAGCTGC
AGACCAACGTCAGCACGCTGAACCAAGCCGCCACCAACGCCTCGCATGCCACGTCGATCCTGCAGACCGCCGATGGCGGC
CTGTCGCAGATCAGCGACATTCTGCAGCGTATGAAGACCCTGACCGCCCAGTCGATCTCGGGCGCCGTGACCAACACCGA
ACGCGCCTACATCAACGCGGAATACGATCAGTTGGTTAAGGAAATCGATTCGATCGTCGCCAGCACCACGTTCAATGGCG
ATCAGCTGCTTAAAGGCACTGGCGCTGGCTATTCGGGGTCCTTCTTGGTGGGAACCAACGCCGGCACCTCCGGCAGCACC
GCCAATAGCGACATTATCGATATCAAAATCACCTCGGGCACCACGCTGGGCGATGGCACGTTCAACGCTGTCGCTGGTTT
GGACCTGGAAACCACGCTGTATAAATCCGGCGCCACGACGAATAAGGAAGACATCGACGCCGCGCAGCTCGCCGCCACCG
CGATCGACAAGGCCATCAGCGCCGTAGCCGGTGCCCGTGCCGATGTCGGTGCGCAGATGTCGCGCTTCCAGTTCCAGGCG
GCGCAGATCGCCAGTTCGACCGAAAACCTCGATGCCGCCCAGTCGGCGATCACCGATGCCGACGTCGCCAAGGAGCAGTC
GAACTTCTCCTCGGCTCAGGTGAAGACCAATGCGGCCATCGCCGCGCTCTCCCAGGCCAACCAGATGCCCCAGCAGCTTC
TCCAGCTGCTGCGCTAA

Upstream 100 bases:

>100_bases
AGCGGCAGGTGACAGGTTCACCCCAGCCGGTACTCGCCCGGGATCAGAAGGCTCCCGCGACAGTCCCTTTCACGGGTACT
CCACCAGAAGGATCAAACAG

Downstream 100 bases:

>100_bases
CGGTTAGCCTTAAGGGGATGAGGGGGGTGGAGCCCACGACCAACCACCCACCCCCCTCAGCCTTTTTTTATGTCGGGGAG
GCGGTCGATGAGCACTTCGG

Product: flagellin-like

Products: NA

Alternate protein names: Class B [H]

Number of amino acids: Translated: 298; Mature: 297

Protein sequence:

>298_residues
MPVITTNTSANSALRYLNMNAAEQTNSLNRIASGSKINRASDDASGLAVATKLQTNVSTLNQAATNASHATSILQTADGG
LSQISDILQRMKTLTAQSISGAVTNTERAYINAEYDQLVKEIDSIVASTTFNGDQLLKGTGAGYSGSFLVGTNAGTSGST
ANSDIIDIKITSGTTLGDGTFNAVAGLDLETTLYKSGATTNKEDIDAAQLAATAIDKAISAVAGARADVGAQMSRFQFQA
AQIASSTENLDAAQSAITDADVAKEQSNFSSAQVKTNAAIAALSQANQMPQQLLQLLR

Sequences:

>Translated_298_residues
MPVITTNTSANSALRYLNMNAAEQTNSLNRIASGSKINRASDDASGLAVATKLQTNVSTLNQAATNASHATSILQTADGG
LSQISDILQRMKTLTAQSISGAVTNTERAYINAEYDQLVKEIDSIVASTTFNGDQLLKGTGAGYSGSFLVGTNAGTSGST
ANSDIIDIKITSGTTLGDGTFNAVAGLDLETTLYKSGATTNKEDIDAAQLAATAIDKAISAVAGARADVGAQMSRFQFQA
AQIASSTENLDAAQSAITDADVAKEQSNFSSAQVKTNAAIAALSQANQMPQQLLQLLR
>Mature_297_residues
PVITTNTSANSALRYLNMNAAEQTNSLNRIASGSKINRASDDASGLAVATKLQTNVSTLNQAATNASHATSILQTADGGL
SQISDILQRMKTLTAQSISGAVTNTERAYINAEYDQLVKEIDSIVASTTFNGDQLLKGTGAGYSGSFLVGTNAGTSGSTA
NSDIIDIKITSGTTLGDGTFNAVAGLDLETTLYKSGATTNKEDIDAAQLAATAIDKAISAVAGARADVGAQMSRFQFQAA
QIASSTENLDAAQSAITDADVAKEQSNFSSAQVKTNAAIAALSQANQMPQQLLQLLR

Specific function: Component of the core of the flagella [H]

COG id: COG1344

COG function: function code N; Flagellin and related hook-associated proteins

Gene ontology:

Cell location: Periplasmic flagellum. Periplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial flagellin family [H]

Homologues:

Organism=Escherichia coli, GI1788232, Length=140, Percent_Identity=36.4285714285714, Blast_Score=86, Evalue=2e-18,

Paralogues:

None

Copy number: 200,000-400,000 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001492
- InterPro:   IPR001029 [H]

Pfam domain/function: PF00700 Flagellin_C; PF00669 Flagellin_N [H]

EC number: NA

Molecular weight: Translated: 30682; Mature: 30551

Theoretical pI: Translated: 4.50; Mature: 4.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPVITTNTSANSALRYLNMNAAEQTNSLNRIASGSKINRASDDASGLAVATKLQTNVSTL
CCEEECCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEHHHHHHHHH
NQAATNASHATSILQTADGGLSQISDILQRMKTLTAQSISGAVTNTERAYINAEYDQLVK
HHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECHHHHHHH
EIDSIVASTTFNGDQLLKGTGAGYSGSFLVGTNAGTSGSTANSDIIDIKITSGTTLGDGT
HHHHHHHHCCCCCCHHEECCCCCCCCCEEEECCCCCCCCCCCCCEEEEEEECCCEECCCC
FNAVAGLDLETTLYKSGATTNKEDIDAAQLAATAIDKAISAVAGARADVGAQMSRFQFQA
CHHHCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
AQIASSTENLDAAQSAITDADVAKEQSNFSSAQVKTNAAIAALSQANQMPQQLLQLLR
HHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure 
PVITTNTSANSALRYLNMNAAEQTNSLNRIASGSKINRASDDASGLAVATKLQTNVSTL
CEEECCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEHHHHHHHHH
NQAATNASHATSILQTADGGLSQISDILQRMKTLTAQSISGAVTNTERAYINAEYDQLVK
HHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECHHHHHHH
EIDSIVASTTFNGDQLLKGTGAGYSGSFLVGTNAGTSGSTANSDIIDIKITSGTTLGDGT
HHHHHHHHCCCCCCHHEECCCCCCCCCEEEECCCCCCCCCCCCCEEEEEEECCCEECCCC
FNAVAGLDLETTLYKSGATTNKEDIDAAQLAATAIDKAISAVAGARADVGAQMSRFQFQA
CHHHCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
AQIASSTENLDAAQSAITDADVAKEQSNFSSAQVKTNAAIAALSQANQMPQQLLQLLR
HHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3045083 [H]