Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
---|---|
Accession | NC_007643 |
Length | 4,352,825 |
Click here to switch to the map view.
The map label for this gene is 83593861
Identifier: 83593861
GI number: 83593861
Start: 2940570
End: 2941253
Strand: Reverse
Name: 83593861
Synonym: Rru_A2526
Alternate gene names: NA
Gene position: 2941253-2940570 (Counterclockwise)
Preceding gene: 83593863
Following gene: 83593860
Centisome position: 67.57
GC content: 68.27
Gene sequence:
>684_bases ATGACCGAAATGACCGGTCTCACCCCGCTGATGATCGCTGGGCAATTAACGCGGCCGCTGCCGTTTTCCGTGGTGCAGGC GCTGACCGCCCCGGTGTTCCGTCACTGGACCCAGGTTTGGGGACCGGCGCTCGGCAACCGGCTGTCGGGTCAAACCGGCT GTTTGTCGATCCGCCCGGTTGGCTGGCCGGTCTGCGTCGAGATCAGCCTTTTTCCGGCGGACGCGGCCGATCCCAAGGGT CGGGTCGAGATGTCCCTCGCTACCCCGGAAACCAGTCTGGCCACGGCGATCATCAGTGCCGCGCCCGAGGTTCTGCTTGA CCTGATGGCGGCCAAGGACGGCCCCGATGGCGACGGCGCCTTTTTCTCGCGCGCCTTGCGCATGGAAGGCGATACCGGGC TGGTCATGGCCTTCCGCTATGCCATGGAAGACGCCGGGTTGAACCTGGAAACCCTGGCGCGCGACGTTCCCGCGCCCTTG GCCAAGGTGATCGCCCTGTTGTCGGGGCGGCTCGCCCCCCTGCACCAACGGGCGATGAAGGATCTGGAGCGGGCGCAGAC CCTGCTGTTCGCCCCCTTGCGCGGCGATCTGGCGCGGTTGACGGCCCGGGTGCAGCGCTTGGAGGCGGCGGGCCCGGCCC GGCGCCCGCGCGTCGTCTCGAAGGGGGATATCGCCCATGGTTGA
Upstream 100 bases:
>100_bases CCGTCGGGAGTGGTCATGTCTGAGCGTAACCTGAATCAATGACGGGCGATTTTCCGTTGGCTAAAGTCCGCCGGACCATC GAGCCGAGAAGGAGTCTTTG
Downstream 100 bases:
>100_bases AACGCTGTGTCGTCCGGTTCGAGACGACTCCATCGAACTCGAATGCCCGGCGGGCACCCCCGCCGCCCTGGCGGCGGCGA TCGAGGCTGGGGCTGATTCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 227; Mature: 226
Protein sequence:
>227_residues MTEMTGLTPLMIAGQLTRPLPFSVVQALTAPVFRHWTQVWGPALGNRLSGQTGCLSIRPVGWPVCVEISLFPADAADPKG RVEMSLATPETSLATAIISAAPEVLLDLMAAKDGPDGDGAFFSRALRMEGDTGLVMAFRYAMEDAGLNLETLARDVPAPL AKVIALLSGRLAPLHQRAMKDLERAQTLLFAPLRGDLARLTARVQRLEAAGPARRPRVVSKGDIAHG
Sequences:
>Translated_227_residues MTEMTGLTPLMIAGQLTRPLPFSVVQALTAPVFRHWTQVWGPALGNRLSGQTGCLSIRPVGWPVCVEISLFPADAADPKG RVEMSLATPETSLATAIISAAPEVLLDLMAAKDGPDGDGAFFSRALRMEGDTGLVMAFRYAMEDAGLNLETLARDVPAPL AKVIALLSGRLAPLHQRAMKDLERAQTLLFAPLRGDLARLTARVQRLEAAGPARRPRVVSKGDIAHG >Mature_226_residues TEMTGLTPLMIAGQLTRPLPFSVVQALTAPVFRHWTQVWGPALGNRLSGQTGCLSIRPVGWPVCVEISLFPADAADPKGR VEMSLATPETSLATAIISAAPEVLLDLMAAKDGPDGDGAFFSRALRMEGDTGLVMAFRYAMEDAGLNLETLARDVPAPLA KVIALLSGRLAPLHQRAMKDLERAQTLLFAPLRGDLARLTARVQRLEAAGPARRPRVVSKGDIAHG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24226; Mature: 24094
Theoretical pI: Translated: 8.78; Mature: 8.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEMTGLTPLMIAGQLTRPLPFSVVQALTAPVFRHWTQVWGPALGNRLSGQTGCLSIRPV CCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECC GWPVCVEISLFPADAADPKGRVEMSLATPETSLATAIISAAPEVLLDLMAAKDGPDGDGA CCCEEEEEEEECCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH FFSRALRMEGDTGLVMAFRYAMEDAGLNLETLARDVPAPLAKVIALLSGRLAPLHQRAMK HHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHH DLERAQTLLFAPLRGDLARLTARVQRLEAAGPARRPRVVSKGDIAHG HHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TEMTGLTPLMIAGQLTRPLPFSVVQALTAPVFRHWTQVWGPALGNRLSGQTGCLSIRPV CCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECC GWPVCVEISLFPADAADPKGRVEMSLATPETSLATAIISAAPEVLLDLMAAKDGPDGDGA CCCEEEEEEEECCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHH FFSRALRMEGDTGLVMAFRYAMEDAGLNLETLARDVPAPLAKVIALLSGRLAPLHQRAMK HHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHCCCCCHHHHHHHH DLERAQTLLFAPLRGDLARLTARVQRLEAAGPARRPRVVSKGDIAHG HHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA