Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
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Accession | NC_007643 |
Length | 4,352,825 |
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The map label for this gene is gsiB [H]
Identifier: 83593809
GI number: 83593809
Start: 2873323
End: 2874900
Strand: Direct
Name: gsiB [H]
Synonym: Rru_A2474
Alternate gene names: 83593809
Gene position: 2873323-2874900 (Clockwise)
Preceding gene: 83593808
Following gene: 83593810
Centisome position: 66.01
GC content: 70.6
Gene sequence:
>1578_bases ATGACGGCCTGGATAGTCCTGACGGCCCCCGCCGCTTCGACCGCCGCCGAGTTCCGCTGGACGGCGGCGCAGGGCCCGGC GACGCTGGAGCCCCAATCCCCGGAAGCCCTGGCCGACCCCGGGGTTCTGGGCGACGTTTATGAAACGCTGATCGGCCGCG ACTCCGATCTTGACCTTGAACCGGCCCTGGCGACCGCTTGGCAGGCGGTGACCGATTTACGCTGGCGGGTCACCCTGCGT CGGGGCGTGCGCTTCCATGACGGCGCCGCCTTCACCGCCGATGACGTGGTCGCCTCGCTGGAGCGCGCCAGCGCCCGCGG CGGCGGTCTGGCCGAAGCGCTGGCGCCGGTGCGCCGCGTCCGCCGGGTCGATGATACGACGGTCGATCTTTACACCCAAA CGCCCACCCCCGATCTGCCCCAACGCCTCGCCCTGATCAGAATCCTCGACGACGGCTGGATCGCCCGCGCCGATCCGGCG ATGCCGGCCAATGGCACCGGCCCCTTCCGAGTGGACCGCTTCACCCCCGGCGGCGCCGTGACGCTGGTGGCCAATGGCGA CTGGTGGGGACGGACGATCCCGGCGGACCCGCTGGGGACGACGGCGCCGCCCGCTCCACGGCTTGAGCGCGCCACCCTGA TTCCCGCCGCCCGCCCGGCCGATCGCTTGCGGCTTTTGCTTGAAGGCAAGGTGGATCTGGCGCTGGATCTGCCGCCCGCC GTGGTGCCTCCCCTGGCCGCCACCCCCGGCCTGCGCGCCCTGGTCATCGGCGGAACGCGCACGGTCATGCTGGGGATGGA CCAGCGCCCGCCGCCCTTGGGCGCCGCTCGCGGCCAGGGCTCGCCCTTTCGCGACCGGCTGTTGCGCGAGGCGGTGCTGC GCGCCGTTGATATGACCGACATCGACCAGCGCCTTTTCGCCAATCAGGCGACCCCGGCCGCCCTGATCGCCGGGCCGATG ATCGCCGGGGTGCCCGCCGCCGCCGATATCCGCCCGGCCGCCGACCCAGACCGGGCCCGCGCCCTGCTTGCCGAAGCCGG AGTCGGCCCCGCCGGAGTCAGCGTCACCCTGGATTGCCCGCTGGGCTTCTTCCTGAACGACGGCGCCCTTTGCGACGCCA TCGCCACCTCTCTTTCGGAAGTCGGCATTCATACCGCCGTCGCCACCCGTTTGGCCGAAAATCATTTCCCGAGGGTTTTA CGCGGGGAAAGCCGGTTCTTCCTAACCGGATACCAACCGTTGACCTTGGATATCCTCGATCCCTTGCGCGCCCTGGCCGC TTGTCCGCCGACCGATGGCTCGCCGAAGGACGGCTTTGGCCAAGCCAATGGCGCGGGCTATTGCGACCCCTCCGTCGATC GGCTTATCCGCCGTCTGGCCGACGAAATGATCCCGGCCCGCCAAAGCGCCCTTGCCGCCGAAATCGTCCTCAAACTGCGC GATGACGTCGTCTATGTCCCCCTCCACCAGGAACCGGTGATCTGGGGGGCGCGGGCCGATATCGGTCTGCGCCAGCGCGC CGACGGCGTGCTTGATCTCCGCTGGGTCAGCCCGGCGCCCGTCCCGCAAGGGCGCTGA
Upstream 100 bases:
>100_bases AGGGCGCGATCTTTTTGATAAGGGTCCCGCGCCTTTCGGCCGGCCTTCCCGAGGGATGACGGTGGCCCGGGCGGCAAGGC GCCAAAGGATGGCGCTGCTG
Downstream 100 bases:
>100_bases TATCCCCCCCGCGATCCCGGCTCTCGCGACCGCGCCGCTAAAAACCAAGCAAAACAGTCGATTACACTCCCCCCTCGCCG ACCCCAGCGGCGCCCGCCCG
Product: extracellular solute-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 525; Mature: 524
Protein sequence:
>525_residues MTAWIVLTAPAASTAAEFRWTAAQGPATLEPQSPEALADPGVLGDVYETLIGRDSDLDLEPALATAWQAVTDLRWRVTLR RGVRFHDGAAFTADDVVASLERASARGGGLAEALAPVRRVRRVDDTTVDLYTQTPTPDLPQRLALIRILDDGWIARADPA MPANGTGPFRVDRFTPGGAVTLVANGDWWGRTIPADPLGTTAPPAPRLERATLIPAARPADRLRLLLEGKVDLALDLPPA VVPPLAATPGLRALVIGGTRTVMLGMDQRPPPLGAARGQGSPFRDRLLREAVLRAVDMTDIDQRLFANQATPAALIAGPM IAGVPAAADIRPAADPDRARALLAEAGVGPAGVSVTLDCPLGFFLNDGALCDAIATSLSEVGIHTAVATRLAENHFPRVL RGESRFFLTGYQPLTLDILDPLRALAACPPTDGSPKDGFGQANGAGYCDPSVDRLIRRLADEMIPARQSALAAEIVLKLR DDVVYVPLHQEPVIWGARADIGLRQRADGVLDLRWVSPAPVPQGR
Sequences:
>Translated_525_residues MTAWIVLTAPAASTAAEFRWTAAQGPATLEPQSPEALADPGVLGDVYETLIGRDSDLDLEPALATAWQAVTDLRWRVTLR RGVRFHDGAAFTADDVVASLERASARGGGLAEALAPVRRVRRVDDTTVDLYTQTPTPDLPQRLALIRILDDGWIARADPA MPANGTGPFRVDRFTPGGAVTLVANGDWWGRTIPADPLGTTAPPAPRLERATLIPAARPADRLRLLLEGKVDLALDLPPA VVPPLAATPGLRALVIGGTRTVMLGMDQRPPPLGAARGQGSPFRDRLLREAVLRAVDMTDIDQRLFANQATPAALIAGPM IAGVPAAADIRPAADPDRARALLAEAGVGPAGVSVTLDCPLGFFLNDGALCDAIATSLSEVGIHTAVATRLAENHFPRVL RGESRFFLTGYQPLTLDILDPLRALAACPPTDGSPKDGFGQANGAGYCDPSVDRLIRRLADEMIPARQSALAAEIVLKLR DDVVYVPLHQEPVIWGARADIGLRQRADGVLDLRWVSPAPVPQGR >Mature_524_residues TAWIVLTAPAASTAAEFRWTAAQGPATLEPQSPEALADPGVLGDVYETLIGRDSDLDLEPALATAWQAVTDLRWRVTLRR GVRFHDGAAFTADDVVASLERASARGGGLAEALAPVRRVRRVDDTTVDLYTQTPTPDLPQRLALIRILDDGWIARADPAM PANGTGPFRVDRFTPGGAVTLVANGDWWGRTIPADPLGTTAPPAPRLERATLIPAARPADRLRLLLEGKVDLALDLPPAV VPPLAATPGLRALVIGGTRTVMLGMDQRPPPLGAARGQGSPFRDRLLREAVLRAVDMTDIDQRLFANQATPAALIAGPMI AGVPAAADIRPAADPDRARALLAEAGVGPAGVSVTLDCPLGFFLNDGALCDAIATSLSEVGIHTAVATRLAENHFPRVLR GESRFFLTGYQPLTLDILDPLRALAACPPTDGSPKDGFGQANGAGYCDPSVDRLIRRLADEMIPARQSALAAEIVLKLRD DVVYVPLHQEPVIWGARADIGLRQRADGVLDLRWVSPAPVPQGR
Specific function: Part of the ABC transporter complex gsiABCD involved in glutathione import [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 5 family [H]
Homologues:
Organism=Escherichia coli, GI1787052, Length=491, Percent_Identity=25.2545824847251, Blast_Score=96, Evalue=6e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000914 [H]
Pfam domain/function: PF00496 SBP_bac_5 [H]
EC number: NA
Molecular weight: Translated: 55715; Mature: 55584
Theoretical pI: Translated: 5.11; Mature: 5.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAWIVLTAPAASTAAEFRWTAAQGPATLEPQSPEALADPGVLGDVYETLIGRDSDLDLE CEEEEEEECCCCCCHHHEEEEECCCCCCCCCCCCHHHCCCCCHHHHHHHHHCCCCCCCCC PALATAWQAVTDLRWRVTLRRGVRFHDGAAFTADDVVASLERASARGGGLAEALAPVRRV HHHHHHHHHHHHHHEEEEHHHCCEECCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHH RRVDDTTVDLYTQTPTPDLPQRLALIRILDDGWIARADPAMPANGTGPFRVDRFTPGGAV HHCCCCEEEEEECCCCCCHHHHEEEEEEECCCCEEECCCCCCCCCCCCEEEEEECCCCEE TLVANGDWWGRTIPADPLGTTAPPAPRLERATLIPAARPADRLRLLLEGKVDLALDLPPA EEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCHHHEEEEECCCEEEEEECCCC VVPPLAATPGLRALVIGGTRTVMLGMDQRPPPLGAARGQGSPFRDRLLREAVLRAVDMTD CCCCCCCCCCCEEEEECCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCH IDQRLFANQATPAALIAGPMIAGVPAAADIRPAADPDRARALLAEAGVGPAGVSVTLDCP HHHHHHHCCCCCHHHHHCHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEEECC LGFFLNDGALCDAIATSLSEVGIHTAVATRLAENHFPRVLRGESRFFLTGYQPLTLDILD CCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCEEEEECCCCEEHHHHH PLRALAACPPTDGSPKDGFGQANGAGYCDPSVDRLIRRLADEMIPARQSALAAEIVLKLR HHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC DDVVYVPLHQEPVIWGARADIGLRQRADGVLDLRWVSPAPVPQGR CCEEEEECCCCCEEEECCCCCCCHHCCCCEEEEEECCCCCCCCCC >Mature Secondary Structure TAWIVLTAPAASTAAEFRWTAAQGPATLEPQSPEALADPGVLGDVYETLIGRDSDLDLE EEEEEEECCCCCCHHHEEEEECCCCCCCCCCCCHHHCCCCCHHHHHHHHHCCCCCCCCC PALATAWQAVTDLRWRVTLRRGVRFHDGAAFTADDVVASLERASARGGGLAEALAPVRRV HHHHHHHHHHHHHHEEEEHHHCCEECCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHH RRVDDTTVDLYTQTPTPDLPQRLALIRILDDGWIARADPAMPANGTGPFRVDRFTPGGAV HHCCCCEEEEEECCCCCCHHHHEEEEEEECCCCEEECCCCCCCCCCCCEEEEEECCCCEE TLVANGDWWGRTIPADPLGTTAPPAPRLERATLIPAARPADRLRLLLEGKVDLALDLPPA EEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCHHHEEEEECCCEEEEEECCCC VVPPLAATPGLRALVIGGTRTVMLGMDQRPPPLGAARGQGSPFRDRLLREAVLRAVDMTD CCCCCCCCCCCEEEEECCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCH IDQRLFANQATPAALIAGPMIAGVPAAADIRPAADPDRARALLAEAGVGPAGVSVTLDCP HHHHHHHCCCCCHHHHHCHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCEEEEEECC LGFFLNDGALCDAIATSLSEVGIHTAVATRLAENHFPRVLRGESRFFLTGYQPLTLDILD CCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCEEEEECCCCEEHHHHH PLRALAACPPTDGSPKDGFGQANGAGYCDPSVDRLIRRLADEMIPARQSALAAEIVLKLR HHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC DDVVYVPLHQEPVIWGARADIGLRQRADGVLDLRWVSPAPVPQGR CCEEEEECCCCCEEEECCCCCCCHHCCCCEEEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA