Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
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Accession | NC_007643 |
Length | 4,352,825 |
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The map label for this gene is aat
Identifier: 83593771
GI number: 83593771
Start: 2834821
End: 2835462
Strand: Direct
Name: aat
Synonym: Rru_A2436
Alternate gene names: 83593771
Gene position: 2834821-2835462 (Clockwise)
Preceding gene: 83593770
Following gene: 83593776
Centisome position: 65.13
GC content: 64.64
Gene sequence:
>642_bases GTGATTTCGATCACCCCGGAAATTCTGGTCAGGGCCTATGCCAGCGGGGTTTTCCCGATGGCGCGCGCCCATGACGACCC GCAACTCTATTGGATCGACCCCGACGAGCGCGGCGTTTTGCCGCTGGACGGCTTGCATGTCTCGCGCTCGCTGCGCAAGG TGCTGCGCCACTGCCCTTTCACCGTCACCATCGATACGGTCTTCGTCGAGGTGCTCAAGCAATGCGCCGCCCCGGTGCCC GGCCGGGACGAAACCTGGATCAATGCCGAGATCGAGCATCTGTTCACCGACCTGTTCGACCTCGGCCTTGGCCATAGCGT CGAATGCTGGCAGGGCGACCAGTTGGTCGGCGGGCTTTACGGTCTGGCGATGGGCGGGGTGTTCTTTGGCGAAAGCATGT TCTCGCGCGTCGACAACGCCTCCAAGGTGGCGCTCTGCCATCTGGTCGCCCGGCTCAAACGCGGCGGTTTCCGCCTGCTC GACACCCAGTTCACCACCAACCACCTGCGCAGCATGGGCGCCGTCGAAATCGCCCGGCCGCTTTACCACGCCCGCCTTGG CAACGCCTTGCAGGTGATGGGCGATTTCACCGTCGACGTCCCCGACGTCCTGGCGGCCCTGGACACCCCCAGCGGTTACT GA
Upstream 100 bases:
>100_bases ATCCTATCTCCTTTGGGGACGGCCTCCCGCCGCGCGCGGGAAGCCGTCCCCGATTTCTTGAGCGGAGCCGTTCCTACGCG ATGAAGAAGGTGTGCAGCCG
Downstream 100 bases:
>100_bases CCGGGGGGCCGGACCGCGAGGGGGCGCCTTAATCGAGCGGGGCGCCGCCGGGATCGACCGGGATGGGGGCGGCTTCGGGG GCGCTTTCGGGCTTGCCGCT
Product: leucyl/phenylalanyl-tRNA--protein transferase
Products: NA
Alternate protein names: L/F-transferase; Leucyltransferase; Phenyalanyltransferase
Number of amino acids: Translated: 213; Mature: 213
Protein sequence:
>213_residues MISITPEILVRAYASGVFPMARAHDDPQLYWIDPDERGVLPLDGLHVSRSLRKVLRHCPFTVTIDTVFVEVLKQCAAPVP GRDETWINAEIEHLFTDLFDLGLGHSVECWQGDQLVGGLYGLAMGGVFFGESMFSRVDNASKVALCHLVARLKRGGFRLL DTQFTTNHLRSMGAVEIARPLYHARLGNALQVMGDFTVDVPDVLAALDTPSGY
Sequences:
>Translated_213_residues MISITPEILVRAYASGVFPMARAHDDPQLYWIDPDERGVLPLDGLHVSRSLRKVLRHCPFTVTIDTVFVEVLKQCAAPVP GRDETWINAEIEHLFTDLFDLGLGHSVECWQGDQLVGGLYGLAMGGVFFGESMFSRVDNASKVALCHLVARLKRGGFRLL DTQFTTNHLRSMGAVEIARPLYHARLGNALQVMGDFTVDVPDVLAALDTPSGY >Mature_213_residues MISITPEILVRAYASGVFPMARAHDDPQLYWIDPDERGVLPLDGLHVSRSLRKVLRHCPFTVTIDTVFVEVLKQCAAPVP GRDETWINAEIEHLFTDLFDLGLGHSVECWQGDQLVGGLYGLAMGGVFFGESMFSRVDNASKVALCHLVARLKRGGFRLL DTQFTTNHLRSMGAVEIARPLYHARLGNALQVMGDFTVDVPDVLAALDTPSGY
Specific function: Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl-tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine
COG id: COG2360
COG function: function code O; Leu/Phe-tRNA-protein transferase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the L/F-transferase family
Homologues:
Organism=Escherichia coli, GI1787111, Length=180, Percent_Identity=41.6666666666667, Blast_Score=137, Evalue=6e-34,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): LFTR_RHORT (Q2RRK9)
Other databases:
- EMBL: CP000230 - RefSeq: YP_427523.1 - ProteinModelPortal: Q2RRK9 - SMR: Q2RRK9 - STRING: Q2RRK9 - GeneID: 3835870 - GenomeReviews: CP000230_GR - KEGG: rru:Rru_A2436 - NMPDR: fig|1085.1.peg.84 - eggNOG: COG2360 - HOGENOM: HBG485363 - OMA: GEPILWW - PhylomeDB: Q2RRK9 - ProtClustDB: PRK00301 - BioCyc: RRUB269796:RRU_A2436-MONOMER - GO: GO:0005737 - HAMAP: MF_00688 - InterPro: IPR016181 - InterPro: IPR004616 - TIGRFAMs: TIGR00667
Pfam domain/function: PF03588 Leu_Phe_trans; SSF55729 Acyl_CoA_acyltransferase
EC number: =2.3.2.6
Molecular weight: Translated: 23509; Mature: 23509
Theoretical pI: Translated: 5.81; Mature: 5.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MISITPEILVRAYASGVFPMARAHDDPQLYWIDPDERGVLPLDGLHVSRSLRKVLRHCPF CCCCCHHHHHHHHHHCCCHHHHCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCC TVTIDTVFVEVLKQCAAPVPGRDETWINAEIEHLFTDLFDLGLGHSVECWQGDQLVGGLY EEEHHHHHHHHHHHHCCCCCCCCCCEEHHHHHHHHHHHHHHCCCCCEECCCCCHHHHHHH GLAMGGVFFGESMFSRVDNASKVALCHLVARLKRGGFRLLDTQFTTNHLRSMGAVEIARP HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEECHHHHHHHHHCCHHHHHHH LYHARLGNALQVMGDFTVDVPDVLAALDTPSGY HHHHHHCCHHHHHCCCCCCHHHHHHHHCCCCCC >Mature Secondary Structure MISITPEILVRAYASGVFPMARAHDDPQLYWIDPDERGVLPLDGLHVSRSLRKVLRHCPF CCCCCHHHHHHHHHHCCCHHHHCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCC TVTIDTVFVEVLKQCAAPVPGRDETWINAEIEHLFTDLFDLGLGHSVECWQGDQLVGGLY EEEHHHHHHHHHHHHCCCCCCCCCCEEHHHHHHHHHHHHHHCCCCCEECCCCCHHHHHHH GLAMGGVFFGESMFSRVDNASKVALCHLVARLKRGGFRLLDTQFTTNHLRSMGAVEIARP HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEEECHHHHHHHHHCCHHHHHHH LYHARLGNALQVMGDFTVDVPDVLAALDTPSGY HHHHHHCCHHHHHCCCCCCHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA