Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
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Accession | NC_007643 |
Length | 4,352,825 |
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The map label for this gene is cfxP [H]
Identifier: 83593739
GI number: 83593739
Start: 2799037
End: 2799915
Strand: Direct
Name: cfxP [H]
Synonym: Rru_A2404
Alternate gene names: 83593739
Gene position: 2799037-2799915 (Clockwise)
Preceding gene: 83593738
Following gene: 83593740
Centisome position: 64.3
GC content: 62.34
Gene sequence:
>879_bases ATGTCGGTTAAGCATCCGATCATCGCCATCACCGGATCCTCGGGCGCGGGAACCACGTCGGTGACCCGCACTTTTGAGCA GATCTTCCGTCGCGAAGGGGTCAACGCGGCGGTCGTCGAAGGCGACAGTTTCCACCGCAATGATCGCAAGGCCATGAAGA TCGCCATGGCCGAGGCGCAGAAGGCGGGCAACGCCAATTTCAGCCACTTCGGCCCGGAAGCCAATCTGTTCGAGGAGCTT GAAACGCTGTTTCGCACCTATGGCGAAACCGGCGGCGGCCGGCGACGGCTGTATCTGCACAACGACGAGGAGGCCGCCCC CTTCGCCCAGGAGCCCGGCACCTTCACGCCCTGGGAAGACCTGCCCGAAAGCGATCTGCTGTTCTACGAGGGCCTGCACG GCGCCGTGGTGACCGATACGGTCGATGTCGCCCAGCACGCCGACCTCAAGATCGGCGTCGTGCCGGTGATCAATGTCGAA TGGATCCAGAAGCTCCATCGCGATCGCGCCGCCCGCGGCTATAGCACCGAGGCGGTGACCGACACCATTTTGCGGCGCAT GCCCGATTACGTTCACTACATCTGTCCGCAGTTCACCCGCACCGATGTGAATTTCCAGCGCGTGCCCTTGGTCGACACCT CCAATCCCTTCGTCGCCCGCCATGTGCCCTCGGCCGATGAAAGCTTCGTCGTCATCCGCTTCCGCGACCCCAAGGGCATC GATTTTCCCTATCTGCTCAACATGCTCAACGACAGCTTCATGTCGCGCCCCAACACCATCGTCGTACCGGGCGGCAAGAT GGAACTGTCGATGCAACTGATCTTCACCCCCTTCATCTGGCGGTTCATGGACAAGCGGGCCCGCGCCCTCGGGCGCTGA
Upstream 100 bases:
>100_bases CGGCGTACCGCCGACCGGGGACGTCGGCGCTTACACCATCGTCACCAAAAAAGCGGCAGAGCGGTCAGATCACCACCGCT CGACAGGGGGAAGCACGAGT
Downstream 100 bases:
>100_bases CGCCCAAGTCCTGTCAAGAAAACCGCCCAACAAAACCACAAGGATCCCGGGAGAGTTTCCGATGACCGTCACCACCGCCG CCCCGCCGCCCCGCGCCGAC
Product: phosphoribulokinase
Products: NA
Alternate protein names: PRK; PRKase; Phosphopentokinase [H]
Number of amino acids: Translated: 292; Mature: 291
Protein sequence:
>292_residues MSVKHPIIAITGSSGAGTTSVTRTFEQIFRREGVNAAVVEGDSFHRNDRKAMKIAMAEAQKAGNANFSHFGPEANLFEEL ETLFRTYGETGGGRRRLYLHNDEEAAPFAQEPGTFTPWEDLPESDLLFYEGLHGAVVTDTVDVAQHADLKIGVVPVINVE WIQKLHRDRAARGYSTEAVTDTILRRMPDYVHYICPQFTRTDVNFQRVPLVDTSNPFVARHVPSADESFVVIRFRDPKGI DFPYLLNMLNDSFMSRPNTIVVPGGKMELSMQLIFTPFIWRFMDKRARALGR
Sequences:
>Translated_292_residues MSVKHPIIAITGSSGAGTTSVTRTFEQIFRREGVNAAVVEGDSFHRNDRKAMKIAMAEAQKAGNANFSHFGPEANLFEEL ETLFRTYGETGGGRRRLYLHNDEEAAPFAQEPGTFTPWEDLPESDLLFYEGLHGAVVTDTVDVAQHADLKIGVVPVINVE WIQKLHRDRAARGYSTEAVTDTILRRMPDYVHYICPQFTRTDVNFQRVPLVDTSNPFVARHVPSADESFVVIRFRDPKGI DFPYLLNMLNDSFMSRPNTIVVPGGKMELSMQLIFTPFIWRFMDKRARALGR >Mature_291_residues SVKHPIIAITGSSGAGTTSVTRTFEQIFRREGVNAAVVEGDSFHRNDRKAMKIAMAEAQKAGNANFSHFGPEANLFEELE TLFRTYGETGGGRRRLYLHNDEEAAPFAQEPGTFTPWEDLPESDLLFYEGLHGAVVTDTVDVAQHADLKIGVVPVINVEW IQKLHRDRAARGYSTEAVTDTILRRMPDYVHYICPQFTRTDVNFQRVPLVDTSNPFVARHVPSADESFVVIRFRDPKGID FPYLLNMLNDSFMSRPNTIVVPGGKMELSMQLIFTPFIWRFMDKRARALGR
Specific function: Unknown
COG id: COG3954
COG function: function code C; Phosphoribulokinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphoribulokinase family [H]
Homologues:
Organism=Escherichia coli, GI2367214, Length=287, Percent_Identity=59.2334494773519, Blast_Score=352, Evalue=2e-98,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006082 - InterPro: IPR006083 [H]
Pfam domain/function: PF00485 PRK [H]
EC number: =2.7.1.19 [H]
Molecular weight: Translated: 32968; Mature: 32837
Theoretical pI: Translated: 6.61; Mature: 6.61
Prosite motif: PS00567 PHOSPHORIBULOKINASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVKHPIIAITGSSGAGTTSVTRTFEQIFRREGVNAAVVEGDSFHRNDRKAMKIAMAEAQ CCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHH KAGNANFSHFGPEANLFEELETLFRTYGETGGGRRRLYLHNDEEAAPFAQEPGTFTPWED HCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCCCHHH LPESDLLFYEGLHGAVVTDTVDVAQHADLKIGVVPVINVEWIQKLHRDRAARGYSTEAVT CCCCCEEEECCCCCCEEECHHHHHHCCCCEEEEEEEECHHHHHHHHHHHHCCCCCHHHHH DTILRRMPDYVHYICPQFTRTDVNFQRVPLVDTSNPFVARHVPSADESFVVIRFRDPKGI HHHHHHCHHHHHHHCCCCCCCCCCEEEEEEEECCCCEEEECCCCCCCCEEEEEEECCCCC DFPYLLNMLNDSFMSRPNTIVVPGGKMELSMQLIFTPFIWRFMDKRARALGR CHHHHHHHHHHHHHCCCCEEEECCCCEEEEHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SVKHPIIAITGSSGAGTTSVTRTFEQIFRREGVNAAVVEGDSFHRNDRKAMKIAMAEAQ CCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHH KAGNANFSHFGPEANLFEELETLFRTYGETGGGRRRLYLHNDEEAAPFAQEPGTFTPWED HCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCCCHHH LPESDLLFYEGLHGAVVTDTVDVAQHADLKIGVVPVINVEWIQKLHRDRAARGYSTEAVT CCCCCEEEECCCCCCEEECHHHHHHCCCCEEEEEEEECHHHHHHHHHHHHCCCCCHHHHH DTILRRMPDYVHYICPQFTRTDVNFQRVPLVDTSNPFVARHVPSADESFVVIRFRDPKGI HHHHHHCHHHHHHHCCCCCCCCCCEEEEEEEECCCCEEEECCCCCCCCEEEEEEECCCCC DFPYLLNMLNDSFMSRPNTIVVPGGKMELSMQLIFTPFIWRFMDKRARALGR CHHHHHHHHHHHHHCCCCEEEECCCCEEEEHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2559876; 12948488; 2997141 [H]