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The map label for this gene is dppC [H]

Identifier: 83593693

GI number: 83593693

Start: 2745077

End: 2746054

Strand: Direct

Name: dppC [H]

Synonym: Rru_A2358

Alternate gene names: 83593693

Gene position: 2745077-2746054 (Clockwise)

Preceding gene: 83593692

Following gene: 83593694

Centisome position: 63.06

GC content: 67.69

Gene sequence:

>978_bases
ATGACTCTCACCCCTTCCGAACCCAAGACCGGCCCCAAGACGGCGGGGGGCGCGCTCGACGCTCCCGGCCAGGAGGCCGC
CGTCGCCCTGCGGGCCGAAGCGGCGCTCGCCCTCAAGCCGCCCCATCCGCTGGCCGAGTTCTGGCATTACTTCAGCGAAA
ACAAGGGCGCGGTCGCCGGGCTGATCTTCATCGTCGTCATTGTCATCGTCGCCCTCTTCGCCCCCCAGGTCGCCCCCCAC
CATCCCTATGAGATGAACGTGCCGATGGCCAAGATGCCGCCGGCCTGGCTCGAGGGCGGTCAGTGGTCCTATCTGCTGGG
CACCGACGCCCTGGGCCGCGACATCCTGTCGCGCATCATTTTCGGCGCCCGGCTGTCGCTGATGGTCGGCGCCGTGGTGG
TGACGCTGTCGCTGGTCGCCGGCGTCGGCCTTGGCCTGCTGGCGGGCTTCCTGCGCGGCTGGGTCGATATCGTCATCATG
CGGCTGATGGACATCATCTTGTCGGTGCCCAGCCTGCTGCTGGCCATCGCCATCGTCGCCATTCTCGGCCCCGGCCTGGA
AAACGCCATGGCGGCCATCGCCGTCGTCGTCCTGCCCCATTACACCCGGCTGACCCGGGCCGCCGTGATGACCGAGGCGA
CCAAGGATTACGTCACCGCCTCGCGGGTGGCCGGCGCGTCGAAGGGCCGGCTGATGGTCAAGACCATTCTGCCCAATACC
CTGGCGCCGTTGATCGTTCAGGCGACCCTTGGCTTTTCCACGGCGATCCTCGACGCGGCGGCGCTTGGCTTCCTCGGGCT
TGGCGCCCGTCCGCCGCGACCGGAATGGGGAACCATGCTGTCGGAAGCGCGCGAATTCGTGCTCAGCCACTGGTGGATCG
TTACCTTCCCCGGGCTTGCCATCCTGTTCACGGTGCTGGCCTTCAATCTGATGGGCGACGGCCTGCGCGATGCCCTCGAT
CCCCGCATGAAGCGGTGA

Upstream 100 bases:

>100_bases
GCATCTTGCTGATCTCCACCGTGGTCATTCTGGTCAACCTGCTGGTCGATGTGCTGTATGGCGTCATCAACCCGCGCATC
CGCCATCGACGGTAATCAAG

Downstream 100 bases:

>100_bases
GAGTCCTGCCATGTCCTTGCTTGAAATCGAGAACCTGACCGTAGAATTCGGCAGCGGCGACAAACCGTTCCGCGCCGTCG
AGGACGTCAGCTTTTCCGTC

Product: binding-protein dependent transport system inner membrane protein

Products: ADP; phosphate; dipeptides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 325; Mature: 324

Protein sequence:

>325_residues
MTLTPSEPKTGPKTAGGALDAPGQEAAVALRAEAALALKPPHPLAEFWHYFSENKGAVAGLIFIVVIVIVALFAPQVAPH
HPYEMNVPMAKMPPAWLEGGQWSYLLGTDALGRDILSRIIFGARLSLMVGAVVVTLSLVAGVGLGLLAGFLRGWVDIVIM
RLMDIILSVPSLLLAIAIVAILGPGLENAMAAIAVVVLPHYTRLTRAAVMTEATKDYVTASRVAGASKGRLMVKTILPNT
LAPLIVQATLGFSTAILDAAALGFLGLGARPPRPEWGTMLSEAREFVLSHWWIVTFPGLAILFTVLAFNLMGDGLRDALD
PRMKR

Sequences:

>Translated_325_residues
MTLTPSEPKTGPKTAGGALDAPGQEAAVALRAEAALALKPPHPLAEFWHYFSENKGAVAGLIFIVVIVIVALFAPQVAPH
HPYEMNVPMAKMPPAWLEGGQWSYLLGTDALGRDILSRIIFGARLSLMVGAVVVTLSLVAGVGLGLLAGFLRGWVDIVIM
RLMDIILSVPSLLLAIAIVAILGPGLENAMAAIAVVVLPHYTRLTRAAVMTEATKDYVTASRVAGASKGRLMVKTILPNT
LAPLIVQATLGFSTAILDAAALGFLGLGARPPRPEWGTMLSEAREFVLSHWWIVTFPGLAILFTVLAFNLMGDGLRDALD
PRMKR
>Mature_324_residues
TLTPSEPKTGPKTAGGALDAPGQEAAVALRAEAALALKPPHPLAEFWHYFSENKGAVAGLIFIVVIVIVALFAPQVAPHH
PYEMNVPMAKMPPAWLEGGQWSYLLGTDALGRDILSRIIFGARLSLMVGAVVVTLSLVAGVGLGLLAGFLRGWVDIVIMR
LMDIILSVPSLLLAIAIVAILGPGLENAMAAIAVVVLPHYTRLTRAAVMTEATKDYVTASRVAGASKGRLMVKTILPNTL
APLIVQATLGFSTAILDAAALGFLGLGARPPRPEWGTMLSEAREFVLSHWWIVTFPGLAILFTVLAFNLMGDGLRDALDP
RMKR

Specific function: Part of the binding-protein-dependent transport system for dipeptides; probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789964, Length=286, Percent_Identity=63.2867132867133, Blast_Score=314, Evalue=5e-87,
Organism=Escherichia coli, GI1787760, Length=265, Percent_Identity=45.6603773584906, Blast_Score=229, Evalue=1e-61,
Organism=Escherichia coli, GI1787054, Length=290, Percent_Identity=41.0344827586207, Blast_Score=225, Evalue=3e-60,
Organism=Escherichia coli, GI1787549, Length=282, Percent_Identity=40.7801418439716, Blast_Score=193, Evalue=1e-50,
Organism=Escherichia coli, GI1789889, Length=245, Percent_Identity=36.734693877551, Blast_Score=150, Evalue=8e-38,
Organism=Escherichia coli, GI1787498, Length=272, Percent_Identity=34.9264705882353, Blast_Score=142, Evalue=2e-35,
Organism=Escherichia coli, GI1788505, Length=221, Percent_Identity=30.7692307692308, Blast_Score=97, Evalue=1e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 34506; Mature: 34374

Theoretical pI: Translated: 9.69; Mature: 9.69

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLTPSEPKTGPKTAGGALDAPGQEAAVALRAEAALALKPPHPLAEFWHYFSENKGAVAG
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHEEECCCCCHHHHHHHHHCCCCHHHH
LIFIVVIVIVALFAPQVAPHHPYEMNVPMAKMPPAWLEGGQWSYLLGTDALGRDILSRII
HHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCHHHHCCCCEEEEECCHHHHHHHHHHHH
FGARLSLMVGAVVVTLSLVAGVGLGLLAGFLRGWVDIVIMRLMDIILSVPSLLLAIAIVA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILGPGLENAMAAIAVVVLPHYTRLTRAAVMTEATKDYVTASRVAGASKGRLMVKTILPNT
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHCCHH
LAPLIVQATLGFSTAILDAAALGFLGLGARPPRPEWGTMLSEAREFVLSHWWIVTFPGLA
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
ILFTVLAFNLMGDGLRDALDPRMKR
HHHHHHHHHHHCCHHHHHCCCCCCC
>Mature Secondary Structure 
TLTPSEPKTGPKTAGGALDAPGQEAAVALRAEAALALKPPHPLAEFWHYFSENKGAVAG
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHEEECCCCCHHHHHHHHHCCCCHHHH
LIFIVVIVIVALFAPQVAPHHPYEMNVPMAKMPPAWLEGGQWSYLLGTDALGRDILSRII
HHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHCCHHHHCCCCEEEEECCHHHHHHHHHHHH
FGARLSLMVGAVVVTLSLVAGVGLGLLAGFLRGWVDIVIMRLMDIILSVPSLLLAIAIVA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILGPGLENAMAAIAVVVLPHYTRLTRAAVMTEATKDYVTASRVAGASKGRLMVKTILPNT
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHCCHH
LAPLIVQATLGFSTAILDAAALGFLGLGARPPRPEWGTMLSEAREFVLSHWWIVTFPGLA
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
ILFTVLAFNLMGDGLRDALDPRMKR
HHHHHHHHHHHCCHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; dipeptides [Periplasm]; H2O [C]

Specific reaction: ATP + dipeptides [Periplasm] + H2O = ADP + phosphate + dipeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800; 8550458 [H]