Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
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Accession | NC_007643 |
Length | 4,352,825 |
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The map label for this gene is 83593650
Identifier: 83593650
GI number: 83593650
Start: 2678520
End: 2680187
Strand: Direct
Name: 83593650
Synonym: Rru_A2315
Alternate gene names: NA
Gene position: 2678520-2680187 (Clockwise)
Preceding gene: 83593649
Following gene: 83593652
Centisome position: 61.54
GC content: 67.69
Gene sequence:
>1668_bases ATGCCCCCCGACATCCTGCGCATCTACAAGACCGTTCACACCTGGACCGGCATCCTGACGGGCATGGCGTTGTTCATCGC CTTTTATGCCGGCGCGATCACGGTCTTCAAGGAACCGCTCGCCCGCTGGGCTTCCCCGCCGATGACGACGCCCGTCGCCC CGTCCCTGGACGACGCGCTTCCTTTGATTATCAGCACCTTGCGGGCCTCGCCGGAAGCGGCCCGGGAGTTTTCGCTGCAT CTGAGAGAGGCCGAGCACCTGCCGGGGCGGTTGGAGTGGCAAAGCCCGGCCGAGGGGGCAGAGAGTCACCGCCACGATAC CCTGGGGATGGAGCATTTCGTCGCCCATCCGGGGGAGGACGGCGCGGCGCGGATCGAGGCGGTCGCCCCCTCGAAGCTGG CGGAATTCATCGATGTTCTGCACCGGGTGGTCGGACTGCCCTTCGATAGCGATACCGCCCGCTGGATCATGGGCGTGATC GCCTGCCTCTATGCCCTGGCCCTGGTGTCGGGGGTGGTTTTGCTGGTGCCGACCCTGGTCAAAGATCTTTTCGCCCTGCG TCCGGGGCGCAATCTGAAGCGCCTGTGGCGCGACGCCCATAACGTCGTCGGGCTTTTCAGCCTGCCCTTTCACCTTGTCA TGGCCCTGACCGCGACCGTTTTCGCCTTCCATGACGATCTTTACAGCCTGCAAGACACCGTGATCCACGACGGGCGGTTG GCCTCCGTCTGGCAAGCGCCCTCCCCCGCTCCGCCGCAGCCGGGGGAGGCGCGCGATCCGGGCGCCCTGCTGCCCCCGGC CGATCTGCTGGCCCGCGTCCGCGCCCTCTCGCCGACCTTCACGCCGATCCGCCTGCACTACACCCAGGCGACCGGCCCGC GCGCCATGGTGCGCGTCTGGGGTCAGGACGCCACGGCCCTGGTGTCGCGGCCGGCCGGCGGGTTCGTCGCGATCGATCCC TATAGCGGCCGGATCGTCAATGCCGACTATCTGCCCGGCCACCAAAGCCCGGCCCTGACCACCATCGGCAGCTTTTTCGC CCTGCATTTCGCCACCTATGGCGGCCTTCCGGTGAAATGGATGTATTTTCTGCTGGGGCTTGCCGGCGCCTGGCTGTTCT ACAGCGGCAACCTGCTGTGGATCGAAAGCCGTCGCAAGACCCAGCGGCGGGGAGAGGCCACCCCGCCCCGGCAGCGCCGC GACACCACGGTGATGGCGGCGCTCAGCGTTGGCGTGTGCCTGGGCTGCCTCTCGGGCCTGTCGCTGACCATCGTCGCCGG AAAATGGCTTCATGGGGTGGTCAGCGATCTCACCACTTGGCACCAACTCGTCTATTACGCCGTCTTCTTCGCCAGCATCG GCTGGGCTTTCTTGCGCGGAGCGGCCAGGGCCTCCGTCGATCTGCTCTGGCTGGCGACCCTGGCGACGGCGGCCATTCCG TTGACGAGCGGACTGTCCTGGCTGATCCCCCCCTTGCCGCTTTGGGGCCATACGAGCGCCGCCAGTTTAGGCGTGGACGC GACGGCCGGCCTGGGCGCCCTCTGCTTCGCCCTGATGGCGCGCGCCACAAGCCGGCGCCTGCGGTCGGGCCAAGCCGACA GCCTATGGGTGATCCAAGACGGCGAGAGCGGCGGGACCGCAAGCCCGATCAAGCCCTTGCGGCCGTAA
Upstream 100 bases:
>100_bases GACGGCCGGCGCGCCTGGCTGTGGCTGGGCGGGGCCACCGCCCTGGTTCTTGACCTGCTGGTCGTGGCCCGCCTTTCGTG ATCGACAAGGATATTGCCTG
Downstream 100 bases:
>100_bases CATCCGGGAGGACGCGGAGAGCCCGGCGATCGGTTCTCCGCTCGCCGCCGGAGAGTCTTGAGATCAAAGCACTTTGCCTA AGTCGCCCGATAGGGCTCGA
Product: PepSY-associated TM helix
Products: NA
Alternate protein names: PepSY-Associated TM Helix Domain-Containing Protein; Transmembrane Protein; PepSY-Associated TM Helix Domain Protein; Response Regulator Receiver Protein; PepSY-Associated Membrane Protein; Iron-Regulated Membrane Protein; PepSY-Associated TM Helix Family; PepSY-Associated TM Helix Family Protein; Aspartate Kinase
Number of amino acids: Translated: 555; Mature: 554
Protein sequence:
>555_residues MPPDILRIYKTVHTWTGILTGMALFIAFYAGAITVFKEPLARWASPPMTTPVAPSLDDALPLIISTLRASPEAAREFSLH LREAEHLPGRLEWQSPAEGAESHRHDTLGMEHFVAHPGEDGAARIEAVAPSKLAEFIDVLHRVVGLPFDSDTARWIMGVI ACLYALALVSGVVLLVPTLVKDLFALRPGRNLKRLWRDAHNVVGLFSLPFHLVMALTATVFAFHDDLYSLQDTVIHDGRL ASVWQAPSPAPPQPGEARDPGALLPPADLLARVRALSPTFTPIRLHYTQATGPRAMVRVWGQDATALVSRPAGGFVAIDP YSGRIVNADYLPGHQSPALTTIGSFFALHFATYGGLPVKWMYFLLGLAGAWLFYSGNLLWIESRRKTQRRGEATPPRQRR DTTVMAALSVGVCLGCLSGLSLTIVAGKWLHGVVSDLTTWHQLVYYAVFFASIGWAFLRGAARASVDLLWLATLATAAIP LTSGLSWLIPPLPLWGHTSAASLGVDATAGLGALCFALMARATSRRLRSGQADSLWVIQDGESGGTASPIKPLRP
Sequences:
>Translated_555_residues MPPDILRIYKTVHTWTGILTGMALFIAFYAGAITVFKEPLARWASPPMTTPVAPSLDDALPLIISTLRASPEAAREFSLH LREAEHLPGRLEWQSPAEGAESHRHDTLGMEHFVAHPGEDGAARIEAVAPSKLAEFIDVLHRVVGLPFDSDTARWIMGVI ACLYALALVSGVVLLVPTLVKDLFALRPGRNLKRLWRDAHNVVGLFSLPFHLVMALTATVFAFHDDLYSLQDTVIHDGRL ASVWQAPSPAPPQPGEARDPGALLPPADLLARVRALSPTFTPIRLHYTQATGPRAMVRVWGQDATALVSRPAGGFVAIDP YSGRIVNADYLPGHQSPALTTIGSFFALHFATYGGLPVKWMYFLLGLAGAWLFYSGNLLWIESRRKTQRRGEATPPRQRR DTTVMAALSVGVCLGCLSGLSLTIVAGKWLHGVVSDLTTWHQLVYYAVFFASIGWAFLRGAARASVDLLWLATLATAAIP LTSGLSWLIPPLPLWGHTSAASLGVDATAGLGALCFALMARATSRRLRSGQADSLWVIQDGESGGTASPIKPLRP >Mature_554_residues PPDILRIYKTVHTWTGILTGMALFIAFYAGAITVFKEPLARWASPPMTTPVAPSLDDALPLIISTLRASPEAAREFSLHL REAEHLPGRLEWQSPAEGAESHRHDTLGMEHFVAHPGEDGAARIEAVAPSKLAEFIDVLHRVVGLPFDSDTARWIMGVIA CLYALALVSGVVLLVPTLVKDLFALRPGRNLKRLWRDAHNVVGLFSLPFHLVMALTATVFAFHDDLYSLQDTVIHDGRLA SVWQAPSPAPPQPGEARDPGALLPPADLLARVRALSPTFTPIRLHYTQATGPRAMVRVWGQDATALVSRPAGGFVAIDPY SGRIVNADYLPGHQSPALTTIGSFFALHFATYGGLPVKWMYFLLGLAGAWLFYSGNLLWIESRRKTQRRGEATPPRQRRD TTVMAALSVGVCLGCLSGLSLTIVAGKWLHGVVSDLTTWHQLVYYAVFFASIGWAFLRGAARASVDLLWLATLATAAIPL TSGLSWLIPPLPLWGHTSAASLGVDATAGLGALCFALMARATSRRLRSGQADSLWVIQDGESGGTASPIKPLRP
Specific function: Unknown
COG id: COG3182
COG function: function code S; Uncharacterized iron-regulated membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 60056; Mature: 59925
Theoretical pI: Translated: 9.06; Mature: 9.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPPDILRIYKTVHTWTGILTGMALFIAFYAGAITVFKEPLARWASPPMTTPVAPSLDDAL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHH PLIISTLRASPEAAREFSLHLREAEHLPGRLEWQSPAEGAESHRHDTLGMEHFVAHPGED HHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCHHHCCHHHHHCCCCCC GAARIEAVAPSKLAEFIDVLHRVVGLPFDSDTARWIMGVIACLYALALVSGVVLLVPTLV CCHHEECCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KDLFALRPGRNLKRLWRDAHNVVGLFSLPFHLVMALTATVFAFHDDLYSLQDTVIHDGRL HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC ASVWQAPSPAPPQPGEARDPGALLPPADLLARVRALSPTFTPIRLHYTQATGPRAMVRVW HHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEEECCCCCCEEEEEE GQDATALVSRPAGGFVAIDPYSGRIVNADYLPGHQSPALTTIGSFFALHFATYGGLPVKW CCCHHHHHCCCCCCEEEECCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHH MYFLLGLAGAWLFYSGNLLWIESRRKTQRRGEATPPRQRRDTTVMAALSVGVCLGCLSGL HHHHHHHHHHHHHCCCCEEEEECHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC SLTIVAGKWLHGVVSDLTTWHQLVYYAVFFASIGWAFLRGAARASVDLLWLATLATAAIP EEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LTSGLSWLIPPLPLWGHTSAASLGVDATAGLGALCFALMARATSRRLRSGQADSLWVIQD HHCCCHHHCCCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEC GESGGTASPIKPLRP CCCCCCCCCCCCCCC >Mature Secondary Structure PPDILRIYKTVHTWTGILTGMALFIAFYAGAITVFKEPLARWASPPMTTPVAPSLDDAL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHH PLIISTLRASPEAAREFSLHLREAEHLPGRLEWQSPAEGAESHRHDTLGMEHFVAHPGED HHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCHHHCCHHHHHCCCCCC GAARIEAVAPSKLAEFIDVLHRVVGLPFDSDTARWIMGVIACLYALALVSGVVLLVPTLV CCHHEECCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KDLFALRPGRNLKRLWRDAHNVVGLFSLPFHLVMALTATVFAFHDDLYSLQDTVIHDGRL HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC ASVWQAPSPAPPQPGEARDPGALLPPADLLARVRALSPTFTPIRLHYTQATGPRAMVRVW HHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEEECCCCCCEEEEEE GQDATALVSRPAGGFVAIDPYSGRIVNADYLPGHQSPALTTIGSFFALHFATYGGLPVKW CCCHHHHHCCCCCCEEEECCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHH MYFLLGLAGAWLFYSGNLLWIESRRKTQRRGEATPPRQRRDTTVMAALSVGVCLGCLSGL HHHHHHHHHHHHHCCCCEEEEECHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC SLTIVAGKWLHGVVSDLTTWHQLVYYAVFFASIGWAFLRGAARASVDLLWLATLATAAIP EEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LTSGLSWLIPPLPLWGHTSAASLGVDATAGLGALCFALMARATSRRLRSGQADSLWVIQD HHCCCHHHCCCCCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEC GESGGTASPIKPLRP CCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA