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The map label for this gene is occQ [H]

Identifier: 83593587

GI number: 83593587

Start: 2614498

End: 2615196

Strand: Direct

Name: occQ [H]

Synonym: Rru_A2252

Alternate gene names: 83593587

Gene position: 2614498-2615196 (Clockwise)

Preceding gene: 83593586

Following gene: 83593588

Centisome position: 60.06

GC content: 65.95

Gene sequence:

>699_bases
ATGGATTTCCAAGGCTACGGCGACCTGCTGATCACGGGCGCCGCGATGACCATCAAGCTGGTACTGGGCGCGGTGAGCTT
CGGGCTGGTTCTCGGCCTGATCGGAACCACGCTCAAGCTGTCGCGCAACGCCCTGGCCCGGGCCGTCGGCAACGCCTATA
CCGACCTGTTCCGCGGGCTGCCCGAACTGCTGGTCGTGCTGATCATGTATTACGGCGCCGAGGCCCTGGTGCGCTGGCTG
GTCAACGACGTGCTGGCCCTTGATGTCGCCGTCTCGATCAGCCCCTATGTCGGCGGCGTGCTGTCGCTCGGGCTGATCTT
CGGCGCCTATGCCAGCGAGGTGTTTCGCGGCGCCATCCTCGCCATCCCGCGCGGCCATGTCGAAGCCGCCCGCGCCTTCG
GCATGGGCCCGGTCCTCACCTACCGGCGGATCATCCTGCCCCAGGTGTGGCGGGTCGCCCTGCCCGGCCTGGGTAATCTG
TTCCTGGTCTCGCTCAAGGATACCGCCCTGGTCTCGGCGATCGGCTTGAACGAGCTGATGCGCTCGGCCAATATCGCCGG
GCGATCGACCCGGGATTATTTCACCTTCCTGCTGGCCGCCGCCTTTTTGTATCTGGCGATGACAATGGTCAGCATGGCCG
TTATCGCCCTTCTTGAACGCCGGGCCAATCGCGGCCATGTCGGCGCGGCCGGGCACTGA

Upstream 100 bases:

>100_bases
GCGCTCCCCGGGAAGACGGTGGGTGTGATCCGGGCGTAAGGCTTGGGGATCGCGCCCTGAACCGGCCCGGGGAGCGCCCC
CAAAGCTTGCGGGGGATAGG

Downstream 100 bases:

>100_bases
GGAACGCGATCGATGAACCTGGATCTGGTCGCCACCTTCCTGCCCAAGCTGCTGTTCGAAGGGCTTCCCGTCACCCTCAA
GCTGGTGACCCTGGCCGTCG

Product: amino acid ABC transporter permease

Products: ADP; phosphate; L-histidine [Cytoplasm]; ADP; L-ornithine [Cytoplasm]; L-arginine [Cytoplasm]; L-lysine [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 232; Mature: 232

Protein sequence:

>232_residues
MDFQGYGDLLITGAAMTIKLVLGAVSFGLVLGLIGTTLKLSRNALARAVGNAYTDLFRGLPELLVVLIMYYGAEALVRWL
VNDVLALDVAVSISPYVGGVLSLGLIFGAYASEVFRGAILAIPRGHVEAARAFGMGPVLTYRRIILPQVWRVALPGLGNL
FLVSLKDTALVSAIGLNELMRSANIAGRSTRDYFTFLLAAAFLYLAMTMVSMAVIALLERRANRGHVGAAGH

Sequences:

>Translated_232_residues
MDFQGYGDLLITGAAMTIKLVLGAVSFGLVLGLIGTTLKLSRNALARAVGNAYTDLFRGLPELLVVLIMYYGAEALVRWL
VNDVLALDVAVSISPYVGGVLSLGLIFGAYASEVFRGAILAIPRGHVEAARAFGMGPVLTYRRIILPQVWRVALPGLGNL
FLVSLKDTALVSAIGLNELMRSANIAGRSTRDYFTFLLAAAFLYLAMTMVSMAVIALLERRANRGHVGAAGH
>Mature_232_residues
MDFQGYGDLLITGAAMTIKLVLGAVSFGLVLGLIGTTLKLSRNALARAVGNAYTDLFRGLPELLVVLIMYYGAEALVRWL
VNDVLALDVAVSISPYVGGVLSLGLIFGAYASEVFRGAILAIPRGHVEAARAFGMGPVLTYRRIILPQVWRVALPGLGNL
FLVSLKDTALVSAIGLNELMRSANIAGRSTRDYFTFLLAAAFLYLAMTMVSMAVIALLERRANRGHVGAAGH

Specific function: Component of the octopine active transport system probably consisting of four subunits:Q, M, P and T [H]

COG id: COG4215

COG function: function code E; ABC-type arginine transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1788646, Length=221, Percent_Identity=40.2714932126697, Blast_Score=171, Evalue=3e-44,
Organism=Escherichia coli, GI1787087, Length=227, Percent_Identity=37.8854625550661, Blast_Score=145, Evalue=2e-36,
Organism=Escherichia coli, GI1788226, Length=219, Percent_Identity=35.1598173515982, Blast_Score=123, Evalue=1e-29,
Organism=Escherichia coli, GI1787030, Length=213, Percent_Identity=32.3943661971831, Blast_Score=93, Evalue=1e-20,
Organism=Escherichia coli, GI1788645, Length=222, Percent_Identity=34.2342342342342, Blast_Score=91, Evalue=8e-20,
Organism=Escherichia coli, GI1786873, Length=212, Percent_Identity=29.2452830188679, Blast_Score=87, Evalue=7e-19,
Organism=Escherichia coli, GI1786874, Length=217, Percent_Identity=27.1889400921659, Blast_Score=72, Evalue=4e-14,
Organism=Escherichia coli, GI87082239, Length=212, Percent_Identity=30.6603773584906, Blast_Score=71, Evalue=7e-14,
Organism=Escherichia coli, GI1787086, Length=213, Percent_Identity=28.169014084507, Blast_Score=69, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010065
- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 24728; Mature: 24728

Theoretical pI: Translated: 10.10; Mature: 10.10

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDFQGYGDLLITGAAMTIKLVLGAVSFGLVLGLIGTTLKLSRNALARAVGNAYTDLFRGL
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PELLVVLIMYYGAEALVRWLVNDVLALDVAVSISPYVGGVLSLGLIFGAYASEVFRGAIL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHH
AIPRGHVEAARAFGMGPVLTYRRIILPQVWRVALPGLGNLFLVSLKDTALVSAIGLNELM
CCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEECHHHHHHHHHHHHHH
RSANIAGRSTRDYFTFLLAAAFLYLAMTMVSMAVIALLERRANRGHVGAAGH
HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MDFQGYGDLLITGAAMTIKLVLGAVSFGLVLGLIGTTLKLSRNALARAVGNAYTDLFRGL
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PELLVVLIMYYGAEALVRWLVNDVLALDVAVSISPYVGGVLSLGLIFGAYASEVFRGAIL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHH
AIPRGHVEAARAFGMGPVLTYRRIILPQVWRVALPGLGNLFLVSLKDTALVSAIGLNELM
CCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEECHHHHHHHHHHHHHH
RSANIAGRSTRDYFTFLLAAAFLYLAMTMVSMAVIALLERRANRGHVGAAGH
HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; L-histidine [Periplasm]; H2O; ATP; L-ornithine [Periplasm]; L-arginine [Periplasm]; L-lysine [Periplasm] [C]

Specific reaction: ATP + L-histidine [Periplasm] + H2O = ADP + phosphate + L-histidine [Cytoplasm] ATP + L-ornithine [Periplasm] + H2O = ADP + phosphate + L-ornithine [Cytoplasm] ATP + L-arginine [Periplasm] + H2O = ADP + phosphate + L-arginine [Cytoplasm] ATP + L-lysine [P

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA