Definition | Rhodospirillum rubrum ATCC 11170 chromosome, complete genome. |
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Accession | NC_007643 |
Length | 4,352,825 |
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The map label for this gene is pgsA [H]
Identifier: 83593556
GI number: 83593556
Start: 2580511
End: 2581104
Strand: Direct
Name: pgsA [H]
Synonym: Rru_A2221
Alternate gene names: 83593556
Gene position: 2580511-2581104 (Clockwise)
Preceding gene: 83593555
Following gene: 83593557
Centisome position: 59.28
GC content: 63.97
Gene sequence:
>594_bases TTGCTCACTCTGCCCAACATCCTGACCCTGCTGCGCATTCTGATCATTCCCCTGGTCGTCGTGCTGTTTTATGTCGATGG CGAGGGCTATCGCTGGGCCAATTGCGCCCTGTTCGCCGTCGCCGCCATCACCGATTTCTTTGATGGCTGGCTGGCCCGGC GCAGCAATCAGGTCTCGCGGCTTGGCCGTTTCCTCGATCCGATCGCCGATAAGCTGCTGGTCGCGGCGGTGCTGATGCTG CTGGTCGGCTTTGGCCGGATGAGCCCGTGGAGCTACCCGGCCGCCGTCGTCATCCTGATGCGCGAGATCCTGGTCTCGGG CCTGCGCGAATTCCTGGCCGAGATCCGGGTCGGCATGCCGGTGACCAAGCTGGCCAAATGGAAGACCACCGTTCAGCTGA TCGCCCTGCCGGTGCTGATCGTTGGCGATACCCCGCTGATTCCGCTGCCGATCACCCTGATCGGCGAGGGATTGCTGTGG GTGGCGGCCGTCATGACCATCATCACCGGCTATGATTACCTGCGCGTCGGCCTGCGCCACATGGGCCCCGAACACGACGC GCCCCCGTCCCAGGCCCATAATACCCCCCGCTAA
Upstream 100 bases:
>100_bases TCTATGACCACTTCCACAGCGAGGGATAAAGTCGCCCTCAATGATCCGAAGGGGTGCGCCTTGCCCCCGCACCCTATCAC ACCGCCGCGGGGACCAGCCC
Downstream 100 bases:
>100_bases GCGGCCCCTTGCCCGCAAGGGCCGCCCCATCAAGGGATCCCCCATGCCCGCTTCTCCCCCACCCTCTTCCCTTCCCCCGC TTTCGGCCGATTGCTTCGAC
Product: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 197; Mature: 197
Protein sequence:
>197_residues MLTLPNILTLLRILIIPLVVVLFYVDGEGYRWANCALFAVAAITDFFDGWLARRSNQVSRLGRFLDPIADKLLVAAVLML LVGFGRMSPWSYPAAVVILMREILVSGLREFLAEIRVGMPVTKLAKWKTTVQLIALPVLIVGDTPLIPLPITLIGEGLLW VAAVMTIITGYDYLRVGLRHMGPEHDAPPSQAHNTPR
Sequences:
>Translated_197_residues MLTLPNILTLLRILIIPLVVVLFYVDGEGYRWANCALFAVAAITDFFDGWLARRSNQVSRLGRFLDPIADKLLVAAVLML LVGFGRMSPWSYPAAVVILMREILVSGLREFLAEIRVGMPVTKLAKWKTTVQLIALPVLIVGDTPLIPLPITLIGEGLLW VAAVMTIITGYDYLRVGLRHMGPEHDAPPSQAHNTPR >Mature_197_residues MLTLPNILTLLRILIIPLVVVLFYVDGEGYRWANCALFAVAAITDFFDGWLARRSNQVSRLGRFLDPIADKLLVAAVLML LVGFGRMSPWSYPAAVVILMREILVSGLREFLAEIRVGMPVTKLAKWKTTVQLIALPVLIVGDTPLIPLPITLIGEGLLW VAAVMTIITGYDYLRVGLRHMGPEHDAPPSQAHNTPR
Specific function: This protein catalyzes the committed step to the synthesis of the acidic phospholipids [H]
COG id: COG0558
COG function: function code I; Phosphatidylglycerophosphate synthase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CDP-alcohol phosphatidyltransferase class-I family [H]
Homologues:
Organism=Escherichia coli, GI1788220, Length=178, Percent_Identity=40.4494382022472, Blast_Score=116, Evalue=1e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000462 - InterPro: IPR004570 [H]
Pfam domain/function: PF01066 CDP-OH_P_transf [H]
EC number: =2.7.8.5 [H]
Molecular weight: Translated: 21795; Mature: 21795
Theoretical pI: Translated: 9.50; Mature: 9.50
Prosite motif: PS00379 CDP_ALCOHOL_P_TRANSF
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTLPNILTLLRILIIPLVVVLFYVDGEGYRWANCALFAVAAITDFFDGWLARRSNQVSR CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGRFLDPIADKLLVAAVLMLLVGFGRMSPWSYPAAVVILMREILVSGLREFLAEIRVGMP HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC VTKLAKWKTTVQLIALPVLIVGDTPLIPLPITLIGEGLLWVAAVMTIITGYDYLRVGLRH HHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCHHHHHHHHHHHHHCHHHHHHHHHH MGPEHDAPPSQAHNTPR CCCCCCCCCCCCCCCCC >Mature Secondary Structure MLTLPNILTLLRILIIPLVVVLFYVDGEGYRWANCALFAVAAITDFFDGWLARRSNQVSR CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGRFLDPIADKLLVAAVLMLLVGFGRMSPWSYPAAVVILMREILVSGLREFLAEIRVGMP HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC VTKLAKWKTTVQLIALPVLIVGDTPLIPLPITLIGEGLLWVAAVMTIITGYDYLRVGLRH HHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCHHHHHHHHHHHHHCHHHHHHHHHH MGPEHDAPPSQAHNTPR CCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA