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The map label for this gene is recN [H]

Identifier: 83590350

GI number: 83590350

Start: 1551935

End: 1553611

Strand: Reverse

Name: recN [H]

Synonym: Moth_1507

Alternate gene names: 83590350

Gene position: 1553611-1551935 (Counterclockwise)

Preceding gene: 83590351

Following gene: 83590349

Centisome position: 59.1

GC content: 60.41

Gene sequence:

>1677_bases
GTGCTCCAGGAACTGCAAATCGAAAACCTGGCGCTAATCGAGTCCCTGCAGCTCAACCTGGAGCCGGGGCTGACGGTTCT
TACCGGGGAAACGGGTGCCGGCAAGTCCATTATCGTCGACGCCGTGGGACTGCTGGTAGGGGCCCGAGCCTCGGGCGAGT
ATATCCGCGCCGGGGCGGATAAGGCGGTAGTCAGGGGCCTCTTCCAGGTAGCCGGCCTGCCGGGCCTTAAGGAAACCCTG
TCTGCCATGGGGGTGGCTGCGGAGGACGACGGGACCCTGCTCCTTTGCCGGGAGATCAGCCGCAGCGGTCGCCACAGCTG
CCGGGTAAACGGGCGCAGCCTGACTCTGGGTATGTACCAGAGAATTGGCCAGATGCTGGTAGATATCCACGGCCAGCACG
CCTACCAGTCCCTCCTGCGGCCGGCTTATCAAATGGATATGCTGGATAGCCTGGCCGGCCTGATGGAGCTCAGGCAGGAG
GTCGGAGAGTTATATACCAGGTGGCAGGATTTAAAAAAGGAACTGGAGGAACTCTGCGGCGACAGGGGGGAGCGGGAACG
GCAACGTGATCTCTGGCAATACCAGCTCCAGGAAATAGGCGCCGCCAACCTTACCCCCGGGGAAGAGGAAGAATTGAGCC
GCCAGCGGGAAATCCTCAATAACGGGGAAAGGCTGGCCAGGGGTGCGGCGGTCGTTTATGCTGCCCTCTTTGAGGAAGAA
GGCAGATCGGCCTACGATCAGCTCAGCCGGGCCTTGGCGGAACTTGAGGCCCTGGCAGCCATTGATCCCGGCTTGCAGAC
CTGGCAGGGCACCCTGGAGGGGATAACGGCCCAGGTCGAAGAGATAGCCCGGAGCGTTCGCCGCTATGGGGAAGGGCTGG
AGTACGATCCTGCCCGCCTGCAGGAGATTGAAAACCGTCTGGAACTGATAAAAGATTTAAAACGCAAGTACGGCGGCAGT
ATCGAGGCCATTTTACAGTACCAGGCGGAAACGGCGGCCGCCCTGGAAAGGCTTGAGCAAATGGCGGGACAGGCGGCCGC
CCTGGAAAAGGAGATCGAACTGGCCGCGGAAAAATACAGGGAAAAAGCCTTGCTTTTACGCCGGCGGCGTATGGAAGCAG
CGCAAAAAATCGAAAAAGAGCTGCTGAAAGTCCTTAAGGATCTGGCCATGCCGGCAGCCAGGATCAGGGTGGACTGCAGC
GAAGCACCACAGCCAGGCCCAGCGGGTATGGACAACATTACATTTCTTTTTCAACCCAATCCCGGAGAGGGCAGCCGGCC
CCTGGCCCAGATAGCTTCCGGAGGGGAGATGGCCCGGGTAATGCTAGCCTTAAAGAGTATTCTGGCCGATGTTGACGCCG
TGCCAACATTGATATTTGATGAGATTGACGCCGGCGTTGGCGGTGCTGCGGCCCGGGCGGTGGCCAGGACCCTGGCGGCC
ATAGGCCGCCGGCGACAGGTCCTTTGCATTACCCACTCGGCCCAGCTGGCCAGTTTTGCCGGGCAGCACTTCCGGGTTAG
CAAGGAGGTGCGGGAAGGCCGCACCTATACCCGGGTCGATGTTCTCCGGGGTGAAGAGCGGGTTGATGAGCTGGCCCGGT
TATTATCCGGTTCCGCCAGCAGTGTGGCGCGAGAACATGCCGCTGCCCTTTTACAACAATCAGGGTCCATAAAATGA

Upstream 100 bases:

>100_bases
CGTTGCCGGCGACGATACCATTCTGGTGATTGTCAAGCCCAAGGAAGCGGTAGCCACGGTTCTCCAACGCTTCCGGGAAC
TCGGGGAAGGGTGAGGCAGA

Downstream 100 bases:

>100_bases
AATATATGCTAATAAAAATTAAATAACGTTAAATATAGCCCCTTTACTCCCTGAATCAGGCTATATCTCCACCTCAGGTC
GCTTTTGACAGCATAAAAGC

Product: DNA repair protein RecN

Products: NA

Alternate protein names: Recombination protein N [H]

Number of amino acids: Translated: 558; Mature: 558

Protein sequence:

>558_residues
MLQELQIENLALIESLQLNLEPGLTVLTGETGAGKSIIVDAVGLLVGARASGEYIRAGADKAVVRGLFQVAGLPGLKETL
SAMGVAAEDDGTLLLCREISRSGRHSCRVNGRSLTLGMYQRIGQMLVDIHGQHAYQSLLRPAYQMDMLDSLAGLMELRQE
VGELYTRWQDLKKELEELCGDRGERERQRDLWQYQLQEIGAANLTPGEEEELSRQREILNNGERLARGAAVVYAALFEEE
GRSAYDQLSRALAELEALAAIDPGLQTWQGTLEGITAQVEEIARSVRRYGEGLEYDPARLQEIENRLELIKDLKRKYGGS
IEAILQYQAETAAALERLEQMAGQAAALEKEIELAAEKYREKALLLRRRRMEAAQKIEKELLKVLKDLAMPAARIRVDCS
EAPQPGPAGMDNITFLFQPNPGEGSRPLAQIASGGEMARVMLALKSILADVDAVPTLIFDEIDAGVGGAAARAVARTLAA
IGRRRQVLCITHSAQLASFAGQHFRVSKEVREGRTYTRVDVLRGEERVDELARLLSGSASSVAREHAAALLQQSGSIK

Sequences:

>Translated_558_residues
MLQELQIENLALIESLQLNLEPGLTVLTGETGAGKSIIVDAVGLLVGARASGEYIRAGADKAVVRGLFQVAGLPGLKETL
SAMGVAAEDDGTLLLCREISRSGRHSCRVNGRSLTLGMYQRIGQMLVDIHGQHAYQSLLRPAYQMDMLDSLAGLMELRQE
VGELYTRWQDLKKELEELCGDRGERERQRDLWQYQLQEIGAANLTPGEEEELSRQREILNNGERLARGAAVVYAALFEEE
GRSAYDQLSRALAELEALAAIDPGLQTWQGTLEGITAQVEEIARSVRRYGEGLEYDPARLQEIENRLELIKDLKRKYGGS
IEAILQYQAETAAALERLEQMAGQAAALEKEIELAAEKYREKALLLRRRRMEAAQKIEKELLKVLKDLAMPAARIRVDCS
EAPQPGPAGMDNITFLFQPNPGEGSRPLAQIASGGEMARVMLALKSILADVDAVPTLIFDEIDAGVGGAAARAVARTLAA
IGRRRQVLCITHSAQLASFAGQHFRVSKEVREGRTYTRVDVLRGEERVDELARLLSGSASSVAREHAAALLQQSGSIK
>Mature_558_residues
MLQELQIENLALIESLQLNLEPGLTVLTGETGAGKSIIVDAVGLLVGARASGEYIRAGADKAVVRGLFQVAGLPGLKETL
SAMGVAAEDDGTLLLCREISRSGRHSCRVNGRSLTLGMYQRIGQMLVDIHGQHAYQSLLRPAYQMDMLDSLAGLMELRQE
VGELYTRWQDLKKELEELCGDRGERERQRDLWQYQLQEIGAANLTPGEEEELSRQREILNNGERLARGAAVVYAALFEEE
GRSAYDQLSRALAELEALAAIDPGLQTWQGTLEGITAQVEEIARSVRRYGEGLEYDPARLQEIENRLELIKDLKRKYGGS
IEAILQYQAETAAALERLEQMAGQAAALEKEIELAAEKYREKALLLRRRRMEAAQKIEKELLKVLKDLAMPAARIRVDCS
EAPQPGPAGMDNITFLFQPNPGEGSRPLAQIASGGEMARVMLALKSILADVDAVPTLIFDEIDAGVGGAAARAVARTLAA
IGRRRQVLCITHSAQLASFAGQHFRVSKEVREGRTYTRVDVLRGEERVDELARLLSGSASSVAREHAAALLQQSGSIK

Specific function: May be involved in recombinational repair of damaged DNA [H]

COG id: COG0497

COG function: function code L; ATPase involved in DNA repair

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recN family [H]

Homologues:

Organism=Escherichia coli, GI48994901, Length=543, Percent_Identity=35.5432780847145, Blast_Score=298, Evalue=8e-82,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004604
- InterPro:   IPR003395 [H]

Pfam domain/function: PF02463 SMC_N [H]

EC number: NA

Molecular weight: Translated: 61160; Mature: 61160

Theoretical pI: Translated: 5.07; Mature: 5.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLQELQIENLALIESLQLNLEPGLTVLTGETGAGKSIIVDAVGLLVGARASGEYIRAGAD
CCCCHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHHCCCCCCCHHHCCCH
KAVVRGLFQVAGLPGLKETLSAMGVAAEDDGTLLLCREISRSGRHSCRVNGRSLTLGMYQ
HHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCEEEEHHHHHCCCCEEEECCCEEHHHHHH
RIGQMLVDIHGQHAYQSLLRPAYQMDMLDSLAGLMELRQEVGELYTRWQDLKKELEELCG
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
DRGERERQRDLWQYQLQEIGAANLTPGEEEELSRQREILNNGERLARGAAVVYAALFEEE
CCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
GRSAYDQLSRALAELEALAAIDPGLQTWQGTLEGITAQVEEIARSVRRYGEGLEYDPARL
CHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH
QEIENRLELIKDLKRKYGGSIEAILQYQAETAAALERLEQMAGQAAALEKEIELAAEKYR
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EKALLLRRRRMEAAQKIEKELLKVLKDLAMPAARIRVDCSEAPQPGPAGMDNITFLFQPN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEEECCCCCCCCCCCCCCCEEEEEECC
PGEGSRPLAQIASGGEMARVMLALKSILADVDAVPTLIFDEIDAGVGGAAARAVARTLAA
CCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
IGRRRQVLCITHSAQLASFAGQHFRVSKEVREGRTYTRVDVLRGEERVDELARLLSGSAS
HCCCCEEEEEECHHHHHHHCCHHHHHHHHHHCCCCEEHHHHHCCHHHHHHHHHHHCCCHH
SVAREHAAALLQQSGSIK
HHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MLQELQIENLALIESLQLNLEPGLTVLTGETGAGKSIIVDAVGLLVGARASGEYIRAGAD
CCCCHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHHCCCCCCCHHHCCCH
KAVVRGLFQVAGLPGLKETLSAMGVAAEDDGTLLLCREISRSGRHSCRVNGRSLTLGMYQ
HHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCEEEEHHHHHCCCCEEEECCCEEHHHHHH
RIGQMLVDIHGQHAYQSLLRPAYQMDMLDSLAGLMELRQEVGELYTRWQDLKKELEELCG
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
DRGERERQRDLWQYQLQEIGAANLTPGEEEELSRQREILNNGERLARGAAVVYAALFEEE
CCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
GRSAYDQLSRALAELEALAAIDPGLQTWQGTLEGITAQVEEIARSVRRYGEGLEYDPARL
CHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH
QEIENRLELIKDLKRKYGGSIEAILQYQAETAAALERLEQMAGQAAALEKEIELAAEKYR
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EKALLLRRRRMEAAQKIEKELLKVLKDLAMPAARIRVDCSEAPQPGPAGMDNITFLFQPN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEEECCCCCCCCCCCCCCCEEEEEECC
PGEGSRPLAQIASGGEMARVMLALKSILADVDAVPTLIFDEIDAGVGGAAARAVARTLAA
CCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
IGRRRQVLCITHSAQLASFAGQHFRVSKEVREGRTYTRVDVLRGEERVDELARLLSGSAS
HCCCCEEEEEECHHHHHHHCCHHHHHHHHHHCCCCEEHHHHHCCHHHHHHHHHHHCCCHH
SVAREHAAALLQQSGSIK
HHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11058132 [H]