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The map label for this gene is 83590332

Identifier: 83590332

GI number: 83590332

Start: 1537367

End: 1538200

Strand: Reverse

Name: 83590332

Synonym: Moth_1489

Alternate gene names: NA

Gene position: 1538200-1537367 (Counterclockwise)

Preceding gene: 83590333

Following gene: 83590331

Centisome position: 58.51

GC content: 58.15

Gene sequence:

>834_bases
ATGCGGCCCCTGTGGAAAGGCGCCATCAGCTTCGGCCTGGTCAATGTGCCGGTGAAGCTCTACCCGGCCACCGAGAGCAA
CGACCTCAAGTTCAATTACCTGCATACCCGTTGCAAAACACCCATCCAGTACCGGAAGTACTGCCCCTACTGCCAGGTGG
AGGTACCGCCGGAGGAGATAGCACGCGGCTATGAATACGAAAAGGGCAAGTATGTAATCTTGCGGGAGGAAGACCTGGAG
GCTATTCCCGCCGAAAAAACCAGGAGCATTAACATCATGGACTTCGTCGACCTGGAGGAAATCGACCCTATCTACTTCTC
CCGCTCTTACTACCTGGCCCCGGCCGACATGGGCCAGAAGCCTTATCTCCTCTTGAAAAAGGCTATGGAGGAGACGGGCA
AGGTGGCCGTCGCCCGGGTAACTATCCGGAGCCGGGAATCCCTGGCGACGGTCAGGGTCTATGGCCCGGCCTTGGTAATG
AGCACCATGTTTTACCCCCGGGAGGTAAGACCTGTAACCGGGATGCCGGAACTGGACTTCCAGGTGAACCTCCGCGAGAA
CGAGGTGAAGATGGCTGTTACCCTGATCAAGAGCATGGCAACCAGTTTCCAGCCGGAGAAATATACGGACACCTACCGCC
AGGCCCTGCTCCAGGTCATCGAAGCCAAAATCGCCGGGGAAGAAGTAGAGGTTCCGGCCCGGCCGGAGGCCGGCAAAGTA
GTCGATCTCATGGAGGCCCTGAAAGCCAGCATCGAACTGGCCAGGCAGGAAAAGGAGAAAGTTGCTGCCGACGTCGAGGA
CCGCAAGCCCCGCCGCCGGCGCAAAACTTCATGA

Upstream 100 bases:

>100_bases
TGTGCCGATCCTGGCCGGCCCGGGGCGCCCGGGCTTTTCTTTTTGCCGTATTGCCACCCGGCCGGATGGAGATACTAGGG
AAAAGCCTGAGGTGAGAGCC

Downstream 100 bases:

>100_bases
CCACTACCGGAGCCGGCCTGCCCCTGTTCCAGATCAGGCCTATGCTCGCCGTAATCAGCAGGCCCTTCGATTCCCCGGAT
TTCTTGTATGAAATAAAATG

Product: DNA end-binding protein Ku

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 277; Mature: 277

Protein sequence:

>277_residues
MRPLWKGAISFGLVNVPVKLYPATESNDLKFNYLHTRCKTPIQYRKYCPYCQVEVPPEEIARGYEYEKGKYVILREEDLE
AIPAEKTRSINIMDFVDLEEIDPIYFSRSYYLAPADMGQKPYLLLKKAMEETGKVAVARVTIRSRESLATVRVYGPALVM
STMFYPREVRPVTGMPELDFQVNLRENEVKMAVTLIKSMATSFQPEKYTDTYRQALLQVIEAKIAGEEVEVPARPEAGKV
VDLMEALKASIELARQEKEKVAADVEDRKPRRRRKTS

Sequences:

>Translated_277_residues
MRPLWKGAISFGLVNVPVKLYPATESNDLKFNYLHTRCKTPIQYRKYCPYCQVEVPPEEIARGYEYEKGKYVILREEDLE
AIPAEKTRSINIMDFVDLEEIDPIYFSRSYYLAPADMGQKPYLLLKKAMEETGKVAVARVTIRSRESLATVRVYGPALVM
STMFYPREVRPVTGMPELDFQVNLRENEVKMAVTLIKSMATSFQPEKYTDTYRQALLQVIEAKIAGEEVEVPARPEAGKV
VDLMEALKASIELARQEKEKVAADVEDRKPRRRRKTS
>Mature_277_residues
MRPLWKGAISFGLVNVPVKLYPATESNDLKFNYLHTRCKTPIQYRKYCPYCQVEVPPEEIARGYEYEKGKYVILREEDLE
AIPAEKTRSINIMDFVDLEEIDPIYFSRSYYLAPADMGQKPYLLLKKAMEETGKVAVARVTIRSRESLATVRVYGPALVM
STMFYPREVRPVTGMPELDFQVNLRENEVKMAVTLIKSMATSFQPEKYTDTYRQALLQVIEAKIAGEEVEVPARPEAGKV
VDLMEALKASIELARQEKEKVAADVEDRKPRRRRKTS

Specific function: Could be involved in DNA repair [H]

COG id: COG1273

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Ku domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006164
- InterPro:   IPR009187
- InterPro:   IPR016194 [H]

Pfam domain/function: PF02735 Ku [H]

EC number: NA

Molecular weight: Translated: 31843; Mature: 31843

Theoretical pI: Translated: 8.66; Mature: 8.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRPLWKGAISFGLVNVPVKLYPATESNDLKFNYLHTRCKTPIQYRKYCPYCQVEVPPEEI
CCCHHHHHHHHCEEECCEEEEECCCCCCEEEEEEHHHHCCCHHHHHCCCEEEEECCHHHH
ARGYEYEKGKYVILREEDLEAIPAEKTRSINIMDFVDLEEIDPIYFSRSYYLAPADMGQK
HCCCCCCCCCEEEEECCCCCCCCCCCCCEEEEEEECCHHHCCCEEECCEEEECHHCCCCC
PYLLLKKAMEETGKVAVARVTIRSRESLATVRVYGPALVMSTMFYPREVRPVTGMPELDF
HHHHHHHHHHHHCCEEEEEEEEECCCCEEEEEEECHHHHHHHHCCCCCCCCCCCCCCCCE
QVNLRENEVKMAVTLIKSMATSFQPEKYTDTYRQALLQVIEAKIAGEEVEVPARPEAGKV
EEECCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHH
VDLMEALKASIELARQEKEKVAADVEDRKPRRRRKTS
HHHHHHHHHHHHHHHHHHHHHHCCCHHCCCHHHCCCC
>Mature Secondary Structure
MRPLWKGAISFGLVNVPVKLYPATESNDLKFNYLHTRCKTPIQYRKYCPYCQVEVPPEEI
CCCHHHHHHHHCEEECCEEEEECCCCCCEEEEEEHHHHCCCHHHHHCCCEEEEECCHHHH
ARGYEYEKGKYVILREEDLEAIPAEKTRSINIMDFVDLEEIDPIYFSRSYYLAPADMGQK
HCCCCCCCCCEEEEECCCCCCCCCCCCCEEEEEEECCHHHCCCEEECCEEEECHHCCCCC
PYLLLKKAMEETGKVAVARVTIRSRESLATVRVYGPALVMSTMFYPREVRPVTGMPELDF
HHHHHHHHHHHHCCEEEEEEEEECCCCEEEEEEECHHHHHHHHCCCCCCCCCCCCCCCCE
QVNLRENEVKMAVTLIKSMATSFQPEKYTDTYRQALLQVIEAKIAGEEVEVPARPEAGKV
EEECCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHH
VDLMEALKASIELARQEKEKVAADVEDRKPRRRRKTS
HHHHHHHHHHHHHHHHHHHHHHCCCHHCCCHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA