Click here to switch to the map view.

The map label for this gene is trg [C]

Identifier: 83590330

GI number: 83590330

Start: 1533988

End: 1535967

Strand: Reverse

Name: trg [C]

Synonym: Moth_1487

Alternate gene names: 83590330

Gene position: 1535967-1533988 (Counterclockwise)

Preceding gene: 83590331

Following gene: 83590329

Centisome position: 58.43

GC content: 52.58

Gene sequence:

>1980_bases
ATGAAGCTTAAAATCGCCGATAGTATTAGCAGCCGGTTACTAGCGCTGTTCCTTATTTTATCCTTGATACCAGCCATTAT
TATCAGCCTGGTTAACTTTTATTTCAGTAAGGCCCAATTTACAGCTAACACCTATTTGACCCTAAGGCAAATTACCACCA
GTATGGCCGAAAATGTGAACGATTGGATTAACAGCCGTTTAACGCAAATGGATAAGGATGCAACTGCAAGTGTCCTGCAA
TCAAATGATAAAGAGCAAATTAGAGCTTTTGTAAAGATGGTAGCTGAGCAGACGGTTGATGCCAATTTAGTTTTTTTTGC
CGGGACTAACGGTATGGTAATTCCATCCAGCGGGCCAGAAGTCAATATTAGCGATAGGGATTATTACCAGCAGGCCATCA
AAGGCAAGGCCGCTATTTCCAATTTGGTTATCAATAGAAGCACCGGCAAAGAGGGCATAACCATAGCTGTACCGGTTAAA
GGGCCCGGGGGGATTATCGGTATACTGGGTACCCATTATGACAGCCAGACACTATTACACCAGATAAACAACAGCAAGTA
CGGGCGGACGGGTTACGCCTACATGCTCGATAACACGGGCGTGGTCATGGCCCACCCGGATGCTAAAAAAGTTTTGAACG
AAAACCTGACGAAAACTGAATCCCAGAGCCTGAACAATGTCGCCCAGAAAATGCTGCAAAATAAAGAAGGAGAAGATGAG
TATATCCGCAATGGTGTCCGGAACCTGGTCGCCTATGCCCCGGTTAAAGCAACCGGCTGGGTAGTAGCCATGACGGCCCC
CACCAGTGAAGTATACGCCGGGGTCACTGCCATGCAACGTTTTAACATTATCCTTATTACCCTTGCTGCCATCCTCATAG
CCCTGCTGGCCTTTTATATCAGCCGAAAGATAGCCAGGCCCATTATCACCCTGGCGGGGCAGGCCGATGTTTTAGCCACA
GGCAACCTGCAGGTAGACATTAACACCAACTTCTACGGTGAGCTGGGGACTTTAGGCCGATCGTTAAAGACTATGGTCAC
CAACCTGCGGTCCATAGTCCAAAAAGTTCAGGATAGCGCCAACCAGATAGCCTCTTCCGCCCAGGAGTTCAGCGCCTCTA
CGGAGGAAGCTTCCCGGTCGGTGGAGCAGGTGGCCAATGCCATTCAGGATATGGCCCGGGGCGCCAACGACCAGGCTACC
CAGTCCCAGAATATAGCGGAATTGGTCAATAACATCACCGGTGCCATTGGCTCAACCAGGGACAGGGTAGAAGCCCTGGC
CAGGTATTCGGAACAAACCGGGGAGCTGGTGGACGACGGCCTGGCGTCTATGGAAAACCAGAACGACAAGATGGCGGAAA
ACCTGCAGGCAGCGCAAGCTGTCAGCGAAGCTATCAATAAGCTGGCCCGGGGGGCACGGGAGGTGGGTCAGATCCTGGAA
ACAATCACCAGCATTGCCGACCAGACCAACCTGCTCGCCTTGAATGCGGCCATCGAGGCAGCCCGGGCCGGAGAACACGG
GCGGGGTTTTGCCGTAGTCGCTGAAGAAGTGCGCAAACTGGCCGAAGGTTCGGCCCAGGCAGCGAGTGAGATCGGCCAGA
TTGTCCAGAAGATCCAGGACGAGGCCCAGGGGGCGGTGGCAGAAATGGATAAGGCTAAAGTCATTGTCGACGCCCAGCAG
GATGCCGTTAATCATGCCAACGAGGTATTCCAGAACATCTCTCAGAAGGTAAAGGCCATGGTCAAGGGCATCGAAGAAAT
AGCCGCCGCAACGGAGCAGATAAACAATGAGGCCCGGAAAATTACGGAAGCTATCCAGGGGGTGTCGGCAATAGCCGAGG
AGAATGCGGCGGCAGCTGAAGAGATATCGGCCAGTACCGAAGAACAGAGCGCCACGGTGGAGGAAATCGCCGCCTCGGCC
AATGCCCTGGCCAGCCTGGGGCAGGAACTGCAGCAGCTCATTGCCCGATTTAAGCTGTGA

Upstream 100 bases:

>100_bases
ACCATGCGGGACAATGCCAGATGACAGTCATGATTAATTCGGCTTTAATTACAGTGCATGGCCAGCTTAGCCAAATTATA
TTCGAGAAGGGAAGACGATT

Downstream 100 bases:

>100_bases
TGCTGGAAAGGACTAATGCCAGCCCCTGTCCGGGCCCAGGGGAGGATGGTGTCCGGCAGGAAAAAGACACACTTGTTAAC
CTCAATGCCCTCGAAAACTT

Product: methyl-accepting chemotaxis sensory transducer

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 659; Mature: 659

Protein sequence:

>659_residues
MKLKIADSISSRLLALFLILSLIPAIIISLVNFYFSKAQFTANTYLTLRQITTSMAENVNDWINSRLTQMDKDATASVLQ
SNDKEQIRAFVKMVAEQTVDANLVFFAGTNGMVIPSSGPEVNISDRDYYQQAIKGKAAISNLVINRSTGKEGITIAVPVK
GPGGIIGILGTHYDSQTLLHQINNSKYGRTGYAYMLDNTGVVMAHPDAKKVLNENLTKTESQSLNNVAQKMLQNKEGEDE
YIRNGVRNLVAYAPVKATGWVVAMTAPTSEVYAGVTAMQRFNIILITLAAILIALLAFYISRKIARPIITLAGQADVLAT
GNLQVDINTNFYGELGTLGRSLKTMVTNLRSIVQKVQDSANQIASSAQEFSASTEEASRSVEQVANAIQDMARGANDQAT
QSQNIAELVNNITGAIGSTRDRVEALARYSEQTGELVDDGLASMENQNDKMAENLQAAQAVSEAINKLARGAREVGQILE
TITSIADQTNLLALNAAIEAARAGEHGRGFAVVAEEVRKLAEGSAQAASEIGQIVQKIQDEAQGAVAEMDKAKVIVDAQQ
DAVNHANEVFQNISQKVKAMVKGIEEIAAATEQINNEARKITEAIQGVSAIAEENAAAAEEISASTEEQSATVEEIAASA
NALASLGQELQQLIARFKL

Sequences:

>Translated_659_residues
MKLKIADSISSRLLALFLILSLIPAIIISLVNFYFSKAQFTANTYLTLRQITTSMAENVNDWINSRLTQMDKDATASVLQ
SNDKEQIRAFVKMVAEQTVDANLVFFAGTNGMVIPSSGPEVNISDRDYYQQAIKGKAAISNLVINRSTGKEGITIAVPVK
GPGGIIGILGTHYDSQTLLHQINNSKYGRTGYAYMLDNTGVVMAHPDAKKVLNENLTKTESQSLNNVAQKMLQNKEGEDE
YIRNGVRNLVAYAPVKATGWVVAMTAPTSEVYAGVTAMQRFNIILITLAAILIALLAFYISRKIARPIITLAGQADVLAT
GNLQVDINTNFYGELGTLGRSLKTMVTNLRSIVQKVQDSANQIASSAQEFSASTEEASRSVEQVANAIQDMARGANDQAT
QSQNIAELVNNITGAIGSTRDRVEALARYSEQTGELVDDGLASMENQNDKMAENLQAAQAVSEAINKLARGAREVGQILE
TITSIADQTNLLALNAAIEAARAGEHGRGFAVVAEEVRKLAEGSAQAASEIGQIVQKIQDEAQGAVAEMDKAKVIVDAQQ
DAVNHANEVFQNISQKVKAMVKGIEEIAAATEQINNEARKITEAIQGVSAIAEENAAAAEEISASTEEQSATVEEIAASA
NALASLGQELQQLIARFKL
>Mature_659_residues
MKLKIADSISSRLLALFLILSLIPAIIISLVNFYFSKAQFTANTYLTLRQITTSMAENVNDWINSRLTQMDKDATASVLQ
SNDKEQIRAFVKMVAEQTVDANLVFFAGTNGMVIPSSGPEVNISDRDYYQQAIKGKAAISNLVINRSTGKEGITIAVPVK
GPGGIIGILGTHYDSQTLLHQINNSKYGRTGYAYMLDNTGVVMAHPDAKKVLNENLTKTESQSLNNVAQKMLQNKEGEDE
YIRNGVRNLVAYAPVKATGWVVAMTAPTSEVYAGVTAMQRFNIILITLAAILIALLAFYISRKIARPIITLAGQADVLAT
GNLQVDINTNFYGELGTLGRSLKTMVTNLRSIVQKVQDSANQIASSAQEFSASTEEASRSVEQVANAIQDMARGANDQAT
QSQNIAELVNNITGAIGSTRDRVEALARYSEQTGELVDDGLASMENQNDKMAENLQAAQAVSEAINKLARGAREVGQILE
TITSIADQTNLLALNAAIEAARAGEHGRGFAVVAEEVRKLAEGSAQAASEIGQIVQKIQDEAQGAVAEMDKAKVIVDAQQ
DAVNHANEVFQNISQKVKAMVKGIEEIAAATEQINNEARKITEAIQGVSAIAEENAAAAEEISASTEEQSATVEEIAASA
NALASLGQELQQLIARFKL

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1787690, Length=350, Percent_Identity=31.7142857142857, Blast_Score=120, Evalue=2e-28,
Organism=Escherichia coli, GI1788194, Length=354, Percent_Identity=29.3785310734463, Blast_Score=114, Evalue=2e-26,
Organism=Escherichia coli, GI1788195, Length=321, Percent_Identity=28.3489096573209, Blast_Score=106, Evalue=6e-24,
Organism=Escherichia coli, GI1789453, Length=357, Percent_Identity=27.7310924369748, Blast_Score=103, Evalue=5e-23,
Organism=Escherichia coli, GI2367378, Length=319, Percent_Identity=28.2131661442006, Blast_Score=101, Evalue=2e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004010
- InterPro:   IPR003122
- InterPro:   IPR004089
- InterPro:   IPR003660
- InterPro:   IPR022094 [H]

Pfam domain/function: PF02743 Cache_1; PF00672 HAMP; PF12332 McpA_N; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 70710; Mature: 70710

Theoretical pI: Translated: 4.75; Mature: 4.75

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLKIADSISSRLLALFLILSLIPAIIISLVNFYFSKAQFTANTYLTLRQITTSMAENVN
CCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
DWINSRLTQMDKDATASVLQSNDKEQIRAFVKMVAEQTVDANLVFFAGTNGMVIPSSGPE
HHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCEEECCCCCC
VNISDRDYYQQAIKGKAAISNLVINRSTGKEGITIAVPVKGPGGIIGILGTHYDSQTLLH
CCCCHHHHHHHHHHHHHHHHHHHEECCCCCCCEEEEEECCCCCCEEEEECCCCCHHHHHH
QINNSKYGRTGYAYMLDNTGVVMAHPDAKKVLNENLTKTESQSLNNVAQKMLQNKEGEDE
HHCCCCCCCCCEEEEEECCCEEEECCCHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHH
YIRNGVRNLVAYAPVKATGWVVAMTAPTSEVYAGVTAMQRFNIILITLAAILIALLAFYI
HHHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SRKIARPIITLAGQADVLATGNLQVDINTNFYGELGTLGRSLKTMVTNLRSIVQKVQDSA
HHHHHHHHHHHCCCCCEEEECCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
NQIASSAQEFSASTEEASRSVEQVANAIQDMARGANDQATQSQNIAELVNNITGAIGSTR
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCH
DRVEALARYSEQTGELVDDGLASMENQNDKMAENLQAAQAVSEAINKLARGAREVGQILE
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TITSIADQTNLLALNAAIEAARAGEHGRGFAVVAEEVRKLAEGSAQAASEIGQIVQKIQD
HHHHHHCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
EAQGAVAEMDKAKVIVDAQQDAVNHANEVFQNISQKVKAMVKGIEEIAAATEQINNEARK
HHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ITEAIQGVSAIAEENAAAAEEISASTEEQSATVEEIAASANALASLGQELQQLIARFKL
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKLKIADSISSRLLALFLILSLIPAIIISLVNFYFSKAQFTANTYLTLRQITTSMAENVN
CCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
DWINSRLTQMDKDATASVLQSNDKEQIRAFVKMVAEQTVDANLVFFAGTNGMVIPSSGPE
HHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCEEECCCCCC
VNISDRDYYQQAIKGKAAISNLVINRSTGKEGITIAVPVKGPGGIIGILGTHYDSQTLLH
CCCCHHHHHHHHHHHHHHHHHHHEECCCCCCCEEEEEECCCCCCEEEEECCCCCHHHHHH
QINNSKYGRTGYAYMLDNTGVVMAHPDAKKVLNENLTKTESQSLNNVAQKMLQNKEGEDE
HHCCCCCCCCCEEEEEECCCEEEECCCHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCHH
YIRNGVRNLVAYAPVKATGWVVAMTAPTSEVYAGVTAMQRFNIILITLAAILIALLAFYI
HHHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SRKIARPIITLAGQADVLATGNLQVDINTNFYGELGTLGRSLKTMVTNLRSIVQKVQDSA
HHHHHHHHHHHCCCCCEEEECCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
NQIASSAQEFSASTEEASRSVEQVANAIQDMARGANDQATQSQNIAELVNNITGAIGSTR
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCH
DRVEALARYSEQTGELVDDGLASMENQNDKMAENLQAAQAVSEAINKLARGAREVGQILE
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TITSIADQTNLLALNAAIEAARAGEHGRGFAVVAEEVRKLAEGSAQAASEIGQIVQKIQD
HHHHHHCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
EAQGAVAEMDKAKVIVDAQQDAVNHANEVFQNISQKVKAMVKGIEEIAAATEQINNEARK
HHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ITEAIQGVSAIAEENAAAAEEISASTEEQSATVEEIAASANALASLGQELQQLIARFKL
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA