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The map label for this gene is yjiM [H]

Identifier: 83590290

GI number: 83590290

Start: 1488131

End: 1489276

Strand: Reverse

Name: yjiM [H]

Synonym: Moth_1446

Alternate gene names: 83590290

Gene position: 1489276-1488131 (Counterclockwise)

Preceding gene: 83590291

Following gene: 83590289

Centisome position: 56.65

GC content: 49.39

Gene sequence:

>1146_bases
ATGGCCAATCAACCACTGGCGTATTTTGATGATTTGCGGGAAAGAAATGTCCTGGAAATCAAAAAGTTGAAAGACCAGGG
GAAAAAGGTAGTTGGCACTTATTGTGCCTTTACCCCCAAGGAACTCATCATTGCCGCCGGTGCCATCCCAGTTTCCTTAT
GTGGTACCAGGCAAGAACCGATTCCCGAGGCTGAAAAAATCCTTCCCCGGAACCTCTGTCCGTTAATTAAATCCAGTTTT
GGCTTTGCCATTACCGGGAGTTGTCCTTATTTTTATTTTGCCGACCTGCTTATTGCCGAAACCACCTGTGATGGCAAGAT
CAAGATGTACGAATTGCTCAGGGAATATAAACCCATGCATATTCTCAATTTACCGCCCACCTCGCTGGGCGAAGACGCCT
TTGCCTACTGGTATAATGAAATACTTAAAGCCAAAGAACGGCTGGAAAGGGAATTTGCTGTTGAAATCACAACGGCAAAA
TTGCAGGAAGCCATTCGCCTGGTTAATGAAGAACGCCGGGCTTTGCTGGAATTTCATCGCTTAAACCGGCACGACCCAGC
ACCGTTATCGGGTTTGGATCTTTTGAAGGTGCTTTGGGCAAAGGGCTTTACTCCCGATATAGCCGCCGGTACGGCCGTGA
TTCGCCAGGTCACTCTGGCGGTAAAGGAACAGATGGCCAGGGGCGTGTCTGCGGCACCACCGGGCTCACCTCGAATACTC
TTAACCGGTTGTCCGGTAGGCCTGGGTTCCGAGAAGGTGATTAAACTCGTGGAGGCCGGGGGCGGGGTGGTTGTTTGCCT
GGAATCCTGCAGCGGCATTAAAGCCCTGGAGCCCCTTGTGGATGAGGAAGGCGATCCCTTGCAGGCAATTGCTGCCAAGT
ATTTGCAAGTACCCTGTCCCTGTTTAACCCCCAATCGGGGCCGTCTAGAATTGCTGGAACGTCTTATTAAAGAATACAGG
GTCGATGGGGTAATCGATCTCACCTGGCAGGCCTGCCATACGTATAATATTGAGTCTTATAGCATTAAGAAATTGGTCCA
GGAAAAAGAGGGACTGCCTTTTCTACCAATTGAGACTGACTATTCAACAAGTGACTTGCAGCAGCTCAAGGTCCGGATTG
ACGCTTTCCTGGAAATGATTAAATAG

Upstream 100 bases:

>100_bases
GAGTTTGCCCGGCGGATTGGCGCTGATGCCTATGCTCCCGATGCTGCGGCGGCGGTTACTGAGGTGGCTAATTTAATAGA
TAAGGTGAAGGAGCATCAAG

Downstream 100 bases:

>100_bases
CGGGCTGCTGGTTACTTGAAGGGCGACTTGCCGGGAGATAAACACGGTCGAGGTGCTGACGGTTGTGCCATGACGAGGGG
GGCAACCATAACGGTTATGG

Product: 2-hydroxyglutaryl-CoA dehydratase, D-component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 381; Mature: 380

Protein sequence:

>381_residues
MANQPLAYFDDLRERNVLEIKKLKDQGKKVVGTYCAFTPKELIIAAGAIPVSLCGTRQEPIPEAEKILPRNLCPLIKSSF
GFAITGSCPYFYFADLLIAETTCDGKIKMYELLREYKPMHILNLPPTSLGEDAFAYWYNEILKAKERLEREFAVEITTAK
LQEAIRLVNEERRALLEFHRLNRHDPAPLSGLDLLKVLWAKGFTPDIAAGTAVIRQVTLAVKEQMARGVSAAPPGSPRIL
LTGCPVGLGSEKVIKLVEAGGGVVVCLESCSGIKALEPLVDEEGDPLQAIAAKYLQVPCPCLTPNRGRLELLERLIKEYR
VDGVIDLTWQACHTYNIESYSIKKLVQEKEGLPFLPIETDYSTSDLQQLKVRIDAFLEMIK

Sequences:

>Translated_381_residues
MANQPLAYFDDLRERNVLEIKKLKDQGKKVVGTYCAFTPKELIIAAGAIPVSLCGTRQEPIPEAEKILPRNLCPLIKSSF
GFAITGSCPYFYFADLLIAETTCDGKIKMYELLREYKPMHILNLPPTSLGEDAFAYWYNEILKAKERLEREFAVEITTAK
LQEAIRLVNEERRALLEFHRLNRHDPAPLSGLDLLKVLWAKGFTPDIAAGTAVIRQVTLAVKEQMARGVSAAPPGSPRIL
LTGCPVGLGSEKVIKLVEAGGGVVVCLESCSGIKALEPLVDEEGDPLQAIAAKYLQVPCPCLTPNRGRLELLERLIKEYR
VDGVIDLTWQACHTYNIESYSIKKLVQEKEGLPFLPIETDYSTSDLQQLKVRIDAFLEMIK
>Mature_380_residues
ANQPLAYFDDLRERNVLEIKKLKDQGKKVVGTYCAFTPKELIIAAGAIPVSLCGTRQEPIPEAEKILPRNLCPLIKSSFG
FAITGSCPYFYFADLLIAETTCDGKIKMYELLREYKPMHILNLPPTSLGEDAFAYWYNEILKAKERLEREFAVEITTAKL
QEAIRLVNEERRALLEFHRLNRHDPAPLSGLDLLKVLWAKGFTPDIAAGTAVIRQVTLAVKEQMARGVSAAPPGSPRILL
TGCPVGLGSEKVIKLVEAGGGVVVCLESCSGIKALEPLVDEEGDPLQAIAAKYLQVPCPCLTPNRGRLELLERLIKEYRV
DGVIDLTWQACHTYNIESYSIKKLVQEKEGLPFLPIETDYSTSDLQQLKVRIDAFLEMIK

Specific function: Unknown

COG id: COG1775

COG function: function code E; Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit, BcrC/BadD/HgdB

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To M.jannaschii MJ0007 [H]

Homologues:

Organism=Escherichia coli, GI87082427, Length=372, Percent_Identity=48.1182795698925, Blast_Score=373, Evalue=1e-104,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010327 [H]

Pfam domain/function: PF06050 HGD-D [H]

EC number: NA

Molecular weight: Translated: 42446; Mature: 42315

Theoretical pI: Translated: 6.18; Mature: 6.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANQPLAYFDDLRERNVLEIKKLKDQGKKVVGTYCAFTPKELIIAAGAIPVSLCGTRQEP
CCCCCCHHHHHHHCCCHHHHHHHHHCCHHEEHHHHCCCHHHHHEECCCCCCHHCCCCCCC
IPEAEKILPRNLCPLIKSSFGFAITGSCPYFYFADLLIAETTCDGKIKMYELLREYKPMH
CCHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCE
ILNLPPTSLGEDAFAYWYNEILKAKERLEREFAVEITTAKLQEAIRLVNEERRALLEFHR
EEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LNRHDPAPLSGLDLLKVLWAKGFTPDIAAGTAVIRQVTLAVKEQMARGVSAAPPGSPRIL
HCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEE
LTGCPVGLGSEKVIKLVEAGGGVVVCLESCSGIKALEPLVDEEGDPLQAIAAKYLQVPCP
EEECCCCCCHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHCCCCCHHHHHHHHHHHCCCC
CLTPNRGRLELLERLIKEYRVDGVIDLTWQACHTYNIESYSIKKLVQEKEGLPFLPIETD
CCCCCCCHHHHHHHHHHHHCCCCEEEEEEHHHEECCCCHHHHHHHHHHHCCCCEEEECCC
YSTSDLQQLKVRIDAFLEMIK
CCHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure 
ANQPLAYFDDLRERNVLEIKKLKDQGKKVVGTYCAFTPKELIIAAGAIPVSLCGTRQEP
CCCCCHHHHHHHCCCHHHHHHHHHCCHHEEHHHHCCCHHHHHEECCCCCCHHCCCCCCC
IPEAEKILPRNLCPLIKSSFGFAITGSCPYFYFADLLIAETTCDGKIKMYELLREYKPMH
CCHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCE
ILNLPPTSLGEDAFAYWYNEILKAKERLEREFAVEITTAKLQEAIRLVNEERRALLEFHR
EEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LNRHDPAPLSGLDLLKVLWAKGFTPDIAAGTAVIRQVTLAVKEQMARGVSAAPPGSPRIL
HCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEE
LTGCPVGLGSEKVIKLVEAGGGVVVCLESCSGIKALEPLVDEEGDPLQAIAAKYLQVPCP
EEECCCCCCHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHCCCCCHHHHHHHHHHHCCCC
CLTPNRGRLELLERLIKEYRVDGVIDLTWQACHTYNIESYSIKKLVQEKEGLPFLPIETD
CCCCCCCHHHHHHHHHHHHCCCCEEEEEEHHHEECCCCHHHHHHHHHHHCCCCEEEECCC
YSTSDLQQLKVRIDAFLEMIK
CCHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]